| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485448
Identifier: 124485448
GI number: 124485448
Start: 599651
End: 599968
Strand: Reverse
Name: 124485448
Synonym: Mlab_0623
Alternate gene names: NA
Gene position: 599968-599651 (Counterclockwise)
Preceding gene: 124485449
Following gene: 124485447
Centisome position: 33.24
GC content: 53.46
Gene sequence:
>318_bases ATGGGAAGCGAAGTCTATCAGGCTCAGGTCCTCCGGGCGTTTTTCGATACGATCACCGGCACCGACAGGAATCTGACCCG TATCTATATGTGCGTGATTTCGCTTGCCAAACTGAGAATGGAGTCTCCCGAAAGGCTGAGGTTCCTCGTTGAGCAGATGC AGGTCAGCAAAACCAAACGCGAACTTTCAATCGATATTCTTGACTACATGGTCGAGGTGGCAAACTCCCTCGACACTTGG GCAGGTCAGTCCGCGTTCGGCATCACTGCTCCCCAGAACTCCGACGATTTCGGCAGCGTCTCGCTTGACTCTCTGTGA
Upstream 100 bases:
>100_bases ACTGAAGTCCGGCGACATCATCAAGATCGTCAGTACCGCAAAATAACCCCTCTTTTTTGGCAAATCTATATATCGGATAA CTCCCTAATGTAGAATACTT
Downstream 100 bases:
>100_bases TATTTCGATCAAGGATTTCAGCCATTTTTTTGAATACTGATCGGATAATTTCTTTTTTTGAAAAGCTCTTTTCGGCAGAC GAATCATACGGGTTAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MGSEVYQAQVLRAFFDTITGTDRNLTRIYMCVISLAKLRMESPERLRFLVEQMQVSKTKRELSIDILDYMVEVANSLDTW AGQSAFGITAPQNSDDFGSVSLDSL
Sequences:
>Translated_105_residues MGSEVYQAQVLRAFFDTITGTDRNLTRIYMCVISLAKLRMESPERLRFLVEQMQVSKTKRELSIDILDYMVEVANSLDTW AGQSAFGITAPQNSDDFGSVSLDSL >Mature_104_residues GSEVYQAQVLRAFFDTITGTDRNLTRIYMCVISLAKLRMESPERLRFLVEQMQVSKTKRELSIDILDYMVEVANSLDTWA GQSAFGITAPQNSDDFGSVSLDSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11833; Mature: 11701
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSEVYQAQVLRAFFDTITGTDRNLTRIYMCVISLAKLRMESPERLRFLVEQMQVSKTKR CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ELSIDILDYMVEVANSLDTWAGQSAFGITAPQNSDDFGSVSLDSL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GSEVYQAQVLRAFFDTITGTDRNLTRIYMCVISLAKLRMESPERLRFLVEQMQVSKTKR CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ELSIDILDYMVEVANSLDTWAGQSAFGITAPQNSDDFGSVSLDSL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA