| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485411
Identifier: 124485411
GI number: 124485411
Start: 558273
End: 558650
Strand: Reverse
Name: 124485411
Synonym: Mlab_0586
Alternate gene names: NA
Gene position: 558650-558273 (Counterclockwise)
Preceding gene: 124485412
Following gene: 124485405
Centisome position: 30.95
GC content: 52.12
Gene sequence:
>378_bases ATGGGCGTCCGCGAAGCTGCTGCCGTCAGACTGGATGAGAAGAAATCGAAGTTTTACGCACATCTTTACGAGATCGATTC AGTGGAGGATGTTTCAGTTATTCGGGATATCCATGAAAAACTCTACAAAAAAGCCGCCCATCACTGTTATGCGGTCGTCT GCGGAACGTATGCCGACAGCCGGGCGGACGGCGAGGTCGGATCTCCTGGAAGGGTCCTTGCCGAGATTTTAGAGAGAAAT AATCTCTCCAATCATGTTCTGATCGTCTCGAGACTGTTCGGCGGGATCAAACTTGGTCCGGCAGGTGTTGCCCGGGCTTT TCGCGAGGCGGGAAACGGGGCCGTTACCGAGTATCTGGAGAGAAGAAAGGCATTATAA
Upstream 100 bases:
>100_bases ACTCTATGATGCCGACTGTCCGTTTCCGGAAGGAAGCCTTTCCATGCAGGAGTATCTGAACGAGTTCAGAACTGCGCTCT GCGAGATGCGGGATCGATAG
Downstream 100 bases:
>100_bases TCCTGCAGTGACAAGTAATGGATTATGAGTAATGTGCGATTTTGTCCTTTGATCCGGGAGACCTGCATACGGGAAGCCTG CCAGTGGTGGGATGCGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MGVREAAAVRLDEKKSKFYAHLYEIDSVEDVSVIRDIHEKLYKKAAHHCYAVVCGTYADSRADGEVGSPGRVLAEILERN NLSNHVLIVSRLFGGIKLGPAGVARAFREAGNGAVTEYLERRKAL
Sequences:
>Translated_125_residues MGVREAAAVRLDEKKSKFYAHLYEIDSVEDVSVIRDIHEKLYKKAAHHCYAVVCGTYADSRADGEVGSPGRVLAEILERN NLSNHVLIVSRLFGGIKLGPAGVARAFREAGNGAVTEYLERRKAL >Mature_124_residues GVREAAAVRLDEKKSKFYAHLYEIDSVEDVSVIRDIHEKLYKKAAHHCYAVVCGTYADSRADGEVGSPGRVLAEILERNN LSNHVLIVSRLFGGIKLGPAGVARAFREAGNGAVTEYLERRKAL
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13756; Mature: 13625
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVREAAAVRLDEKKSKFYAHLYEIDSVEDVSVIRDIHEKLYKKAAHHCYAVVCGTYADS CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RADGEVGSPGRVLAEILERNNLSNHVLIVSRLFGGIKLGPAGVARAFREAGNGAVTEYLE CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH RRKAL HHCCC >Mature Secondary Structure GVREAAAVRLDEKKSKFYAHLYEIDSVEDVSVIRDIHEKLYKKAAHHCYAVVCGTYADS CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RADGEVGSPGRVLAEILERNNLSNHVLIVSRLFGGIKLGPAGVARAFREAGNGAVTEYLE CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH RRKAL HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA