Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265788
Identifier: 124265788
GI number: 124265788
Start: 626059
End: 627264
Strand: Direct
Name: 124265788
Synonym: Mpe_A0595
Alternate gene names: NA
Gene position: 626059-627264 (Clockwise)
Preceding gene: 124265787
Following gene: 124265790
Centisome position: 15.48
GC content: 75.46
Gene sequence:
>1206_bases GTGCGCGCCGCCACGCCTGGCTCGGCGGCGCCTGACCGTCCGGCCGTGAGCACCAGCTCGCAGCCTGCGCGCCGGCCGGT GCGGCGCGGCGTCTTTGCGCTGCTGGCCGGCCTCAGCCTGCTGCTGCACCTGTGGCTGGCCGATCGCATCGGCGGGCTGC TCGGTGAGGGCGCGGCCGCTGCGGACAGCCCGCCCCGGATGCAGGCCGCCTTCGTACGCGAGCTGCAGCCGGCAGCACCT CCGGCCGTTGCCCCGGCCCCGGCCGCACCGGCGCGACGTGCGGCCCCGGCCGCGCCGGAGGCGACACCGGTACCGGCGTC GGCGCCACAACCCGGGCCGGTCGATCCCGTCGACCCGATCGCCGACAGCGCGCCCGCGCCCGCGTCGGCGCCGGACGCCG CTGTGGCCGAGTCGATGCCGGCGCCGGCACAGGCCGATGACGCAGCGGCGGCGGCCGTGTCCGAAACGGCCGCGAGTGCG CCCACCGGTCCGCTGCCGGGCCCACCCTCCTTCGCCTGGCCGGCGTCGACCCGCCTGAGCTACACACTCACCGGCTACGT GCGCGGCGAGGTGCTCGGCACCGCGCAGGTCGAGTGGCTGCGCGACGGCGACCGCTACCAGGTGCACCTGGACGTGGTCG TCGGGCCGGGCTTCGCCCCCCTGATGCAGCGGCGCATGACGAGCGACGGCGAGATCACCCCGCAGGGCCTGGAGCCGCGC CGCTACGACGAGCGGACCCAGGTGGCCTTCGGCCGCACGCGAACGGCCAGCCTGCACTTCGACGCCGACGGCGTGACGCT CGCCAACGGCCAGCGCCATCCCGGTCTGCCGGCGCTGCAGGACACCGCGAGCCAGTTCGTGCAGCTGACCTACCTGTTCA CCACCGGCGCCGAGCGCCTGCAGCCCGGCGGACGCATCGAGATGCCCCTGGCGCTGCCGCGGCGCGTGGACCGCTGGGTG TACGACGTGATCGGCGAGGAGGTCCTGGCCACCCCGTTCGGTCCGGTGCCGGCCTGGCATCTGCGGCCGCAGCGGGAAGG CGACGCCAGTTCGCTCAGCATCGAGGCCTGGTTCGCGCCCAGCCTGCAGTACCTGCCGGTGCGCATCGTGATCCGTCGCG GGACCGATGAATTCATCGACCTGATGATCGAGCGCCTGCCCCTGCAGGCCGCCGACGAGCCCTTGGGCGGATCGGCGCTG CGCTGA
Upstream 100 bases:
>100_bases GCGGCACGCGACCAGCGTCTGCTGGCTCTGACGCTGCCGGCGGCGCAGGCCGGCGGCGCGGTGACGCTGGTCGCGGCAGC GCAGGCCGACGCCGGAGACC
Downstream 100 bases:
>100_bases CCGTTCAGCTGCCGGTGCGGGCGAGGCCGACGTGCTGCTCGAACTCGGCCGCCTTCGCCTCGCCGAGCTGCTGGCGGACG ACGGTGACGGCCAGCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MRAATPGSAAPDRPAVSTSSQPARRPVRRGVFALLAGLSLLLHLWLADRIGGLLGEGAAAADSPPRMQAAFVRELQPAAP PAVAPAPAAPARRAAPAAPEATPVPASAPQPGPVDPVDPIADSAPAPASAPDAAVAESMPAPAQADDAAAAAVSETAASA PTGPLPGPPSFAWPASTRLSYTLTGYVRGEVLGTAQVEWLRDGDRYQVHLDVVVGPGFAPLMQRRMTSDGEITPQGLEPR RYDERTQVAFGRTRTASLHFDADGVTLANGQRHPGLPALQDTASQFVQLTYLFTTGAERLQPGGRIEMPLALPRRVDRWV YDVIGEEVLATPFGPVPAWHLRPQREGDASSLSIEAWFAPSLQYLPVRIVIRRGTDEFIDLMIERLPLQAADEPLGGSAL R
Sequences:
>Translated_401_residues MRAATPGSAAPDRPAVSTSSQPARRPVRRGVFALLAGLSLLLHLWLADRIGGLLGEGAAAADSPPRMQAAFVRELQPAAP PAVAPAPAAPARRAAPAAPEATPVPASAPQPGPVDPVDPIADSAPAPASAPDAAVAESMPAPAQADDAAAAAVSETAASA PTGPLPGPPSFAWPASTRLSYTLTGYVRGEVLGTAQVEWLRDGDRYQVHLDVVVGPGFAPLMQRRMTSDGEITPQGLEPR RYDERTQVAFGRTRTASLHFDADGVTLANGQRHPGLPALQDTASQFVQLTYLFTTGAERLQPGGRIEMPLALPRRVDRWV YDVIGEEVLATPFGPVPAWHLRPQREGDASSLSIEAWFAPSLQYLPVRIVIRRGTDEFIDLMIERLPLQAADEPLGGSAL R >Mature_401_residues MRAATPGSAAPDRPAVSTSSQPARRPVRRGVFALLAGLSLLLHLWLADRIGGLLGEGAAAADSPPRMQAAFVRELQPAAP PAVAPAPAAPARRAAPAAPEATPVPASAPQPGPVDPVDPIADSAPAPASAPDAAVAESMPAPAQADDAAAAAVSETAASA PTGPLPGPPSFAWPASTRLSYTLTGYVRGEVLGTAQVEWLRDGDRYQVHLDVVVGPGFAPLMQRRMTSDGEITPQGLEPR RYDERTQVAFGRTRTASLHFDADGVTLANGQRHPGLPALQDTASQFVQLTYLFTTGAERLQPGGRIEMPLALPRRVDRWV YDVIGEEVLATPFGPVPAWHLRPQREGDASSLSIEAWFAPSLQYLPVRIVIRRGTDEFIDLMIERLPLQAADEPLGGSAL R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42251; Mature: 42251
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAATPGSAAPDRPAVSTSSQPARRPVRRGVFALLAGLSLLLHLWLADRIGGLLGEGAAA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ADSPPRMQAAFVRELQPAAPPAVAPAPAAPARRAAPAAPEATPVPASAPQPGPVDPVDPI CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHH ADSAPAPASAPDAAVAESMPAPAQADDAAAAAVSETAASAPTGPLPGPPSFAWPASTRLS CCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE YTLTGYVRGEVLGTAQVEWLRDGDRYQVHLDVVVGPGFAPLMQRRMTSDGEITPQGLEPR EEEEEEEECEEECCEEEEEEECCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCC RYDERTQVAFGRTRTASLHFDADGVTLANGQRHPGLPALQDTASQFVQLTYLFTTGAERL CCCCHHHHHCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHEEEHHEECCHHHC QPGGRIEMPLALPRRVDRWVYDVIGEEVLATPFGPVPAWHLRPQREGDASSLSIEAWFAP CCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECC SLQYLPVRIVIRRGTDEFIDLMIERLPLQAADEPLGGSALR CCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRAATPGSAAPDRPAVSTSSQPARRPVRRGVFALLAGLSLLLHLWLADRIGGLLGEGAAA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ADSPPRMQAAFVRELQPAAPPAVAPAPAAPARRAAPAAPEATPVPASAPQPGPVDPVDPI CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHH ADSAPAPASAPDAAVAESMPAPAQADDAAAAAVSETAASAPTGPLPGPPSFAWPASTRLS CCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE YTLTGYVRGEVLGTAQVEWLRDGDRYQVHLDVVVGPGFAPLMQRRMTSDGEITPQGLEPR EEEEEEEECEEECCEEEEEEECCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCC RYDERTQVAFGRTRTASLHFDADGVTLANGQRHPGLPALQDTASQFVQLTYLFTTGAERL CCCCHHHHHCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHEEEHHEECCHHHC QPGGRIEMPLALPRRVDRWVYDVIGEEVLATPFGPVPAWHLRPQREGDASSLSIEAWFAP CCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECC SLQYLPVRIVIRRGTDEFIDLMIERLPLQAADEPLGGSALR CCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA