The gene/protein map for NC_008825 is currently unavailable.
Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265787

Identifier: 124265787

GI number: 124265787

Start: 624378

End: 626093

Strand: Direct

Name: 124265787

Synonym: Mpe_A0594

Alternate gene names: NA

Gene position: 624378-626093 (Clockwise)

Preceding gene: 124265786

Following gene: 124265788

Centisome position: 15.44

GC content: 71.74

Gene sequence:

>1716_bases
ATGATCCGTTACCGCCTCGAGGTGGCCGACGCCCTGGCCCACCAGTTCCGCGTCACCCTCACCATTGCGCAGCCGGCCGA
AGAGCAGGCGCTGAGCCTGCCGGTGTGGATTCCCGGCAGCTACCTGGTGCGGGAGTTCGCCCGCCACCTGTCCCAGCTCG
AGGCGCGCCAGGGCGATCGCAGCGTGCCCCTGATCCAGAGCGACAAGGCCGGCTGGGTAGCGCACTGCCGCGGCCGTGGC
GCGCTGGTGGTGAGCTACGTGGTCTACGCCTTCGACACCTCGGTGCGCGCGGCCTACCTCGATGCCCGGCGCGGCTTCTT
CAACGGCACCGGCGTGTTCCTGCACGTGCACGGCCGCGAGCACGAGCCGCACCGGCTGCGGATCGCCGGGCTGCCCAGGG
GCTGGCAGGTCGCGACAGCGCTGCCGCTCGCCGGTGCCGACCACGAGGCGGCCGACTACGACGAACTGGTCGACCACCCG
GTGGAGCTGGGCCGCTTCTGGCGCGGCAGCTTCAAGGCGGCGGGGGTGCCGCACGAGTTCATCGTGGCTGGAGCGCTGCC
CAGCTTCGACGGCGAGCGCCTGCTGGCCGACACCCGGCGCATCTGCGAGGCGCAGATCGCCTTCTGGCACGGCGGCAAGA
AGCCGCCGTTCAAGCGCTACGTCTTCCTGCTCAATGCGGTGGACGACGGCTACGGCGGCCTGGAGCACCGCGCCAGCACC
GCGCTGATCGCCAACCGCCGCGACCTGCCGCGCAGCGGCATGAAGTCGGCGGGCGATGGCTACGTGACGTTGCTGGGCCT
GATCAGCCACGAGTACTTCCACACCTGGAACGTCAAGCGGATGCGGCCGCGCGACTTCGAGCGCTACGACTACACGCGCG
AGAACTACACCGAGCTGCTGTGGTTCTTCGAGGGCTTCACGTCCTACTACGACGACTTGGTGCTGCGGCGTACCGGCCTG
ATCGACGAGGCACGCTACCTCAAGCTGCTGGCCAAGACCGTCAACAACGTGCGCGGCACGCCGGGGCGCACGGTGCAGAG
CGTGGCCGAGGCCAGCTTCGACGCCTGGGTCAAGTACTACCGGCCCGACGAGAACACCGTCAACGCCACGGTCAGCTACT
ACACCAAGGGCTCGCTGGTCGCGCTGGCGCTCGACCTGACGCTGCGCAGCGAGGGCGCCGGCACGCTCGACGACGTGATG
CGCGGCCTGTGGGTGCGCAGCGGCGGTGGGCCGATCACCGAGACCGACATCGCCGCGGTGCTGGCCGAGGTCGGTGGCCG
CTCTCTGGCGAGCGAATTGACCGCCTGGGTGCACGGCACCGGCGAACTGCCGCTGCAGCCGCTGCTGGCGAAGTTCGGCG
TGGCCTGGAGCGAAGAGCTGCCCGTGCTGGCGCAGCGGCTCGGCGCGCGGCTCAGCGACAGCGGCGGCCTGCTGAAACTG
CAGTCGGTCCTGCGCGGCGGCGCGGCCGAGCGCGCCGGGCTGGCGGCCGGCGACGAGCTGGTGGCACTCGACGGCTGGCG
CCTCAAGCGCATCGACGACCTGAGTGCCCTGCAGGCCTGCGAGCGCCCGATGCCGCTGCTGGCGGCACGCGACCAGCGTC
TGCTGGCTCTGACGCTGCCGGCGGCGCAGGCCGGCGGCGCGGTGACGCTGGTCGCGGCAGCGCAGGCCGACGCCGGAGAC
CGTGCGCGCCGCCACGCCTGGCTCGGCGGCGCCTGA

Upstream 100 bases:

>100_bases
CGCTTCCGGCTCAGCGCGGTCGCCAGCCTCAGCTGCTTCATCGCCGCGGCCGGCAGCTGATGCCCGCCGCCTCCCATTGC
CTTCCGGAACCGAGTTCTCG

Downstream 100 bases:

>100_bases
CCGTCCGGCCGTGAGCACCAGCTCGCAGCCTGCGCGCCGGCCGGTGCGGCGCGGCGTCTTTGCGCTGCTGGCCGGCCTCA
GCCTGCTGCTGCACCTGTGG

Product: peptidase

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; Glycyl Aminopeptidase; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Trypsin-Like Serine Protease; Aminopeptidase N Family Protein; Metallopeptidase; Glycyl Aminopeptidase Protein; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Aminopeptidase; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MIRYRLEVADALAHQFRVTLTIAQPAEEQALSLPVWIPGSYLVREFARHLSQLEARQGDRSVPLIQSDKAGWVAHCRGRG
ALVVSYVVYAFDTSVRAAYLDARRGFFNGTGVFLHVHGREHEPHRLRIAGLPRGWQVATALPLAGADHEAADYDELVDHP
VELGRFWRGSFKAAGVPHEFIVAGALPSFDGERLLADTRRICEAQIAFWHGGKKPPFKRYVFLLNAVDDGYGGLEHRAST
ALIANRRDLPRSGMKSAGDGYVTLLGLISHEYFHTWNVKRMRPRDFERYDYTRENYTELLWFFEGFTSYYDDLVLRRTGL
IDEARYLKLLAKTVNNVRGTPGRTVQSVAEASFDAWVKYYRPDENTVNATVSYYTKGSLVALALDLTLRSEGAGTLDDVM
RGLWVRSGGGPITETDIAAVLAEVGGRSLASELTAWVHGTGELPLQPLLAKFGVAWSEELPVLAQRLGARLSDSGGLLKL
QSVLRGGAAERAGLAAGDELVALDGWRLKRIDDLSALQACERPMPLLAARDQRLLALTLPAAQAGGAVTLVAAAQADAGD
RARRHAWLGGA

Sequences:

>Translated_571_residues
MIRYRLEVADALAHQFRVTLTIAQPAEEQALSLPVWIPGSYLVREFARHLSQLEARQGDRSVPLIQSDKAGWVAHCRGRG
ALVVSYVVYAFDTSVRAAYLDARRGFFNGTGVFLHVHGREHEPHRLRIAGLPRGWQVATALPLAGADHEAADYDELVDHP
VELGRFWRGSFKAAGVPHEFIVAGALPSFDGERLLADTRRICEAQIAFWHGGKKPPFKRYVFLLNAVDDGYGGLEHRAST
ALIANRRDLPRSGMKSAGDGYVTLLGLISHEYFHTWNVKRMRPRDFERYDYTRENYTELLWFFEGFTSYYDDLVLRRTGL
IDEARYLKLLAKTVNNVRGTPGRTVQSVAEASFDAWVKYYRPDENTVNATVSYYTKGSLVALALDLTLRSEGAGTLDDVM
RGLWVRSGGGPITETDIAAVLAEVGGRSLASELTAWVHGTGELPLQPLLAKFGVAWSEELPVLAQRLGARLSDSGGLLKL
QSVLRGGAAERAGLAAGDELVALDGWRLKRIDDLSALQACERPMPLLAARDQRLLALTLPAAQAGGAVTLVAAAQADAGD
RARRHAWLGGA
>Mature_571_residues
MIRYRLEVADALAHQFRVTLTIAQPAEEQALSLPVWIPGSYLVREFARHLSQLEARQGDRSVPLIQSDKAGWVAHCRGRG
ALVVSYVVYAFDTSVRAAYLDARRGFFNGTGVFLHVHGREHEPHRLRIAGLPRGWQVATALPLAGADHEAADYDELVDHP
VELGRFWRGSFKAAGVPHEFIVAGALPSFDGERLLADTRRICEAQIAFWHGGKKPPFKRYVFLLNAVDDGYGGLEHRAST
ALIANRRDLPRSGMKSAGDGYVTLLGLISHEYFHTWNVKRMRPRDFERYDYTRENYTELLWFFEGFTSYYDDLVLRRTGL
IDEARYLKLLAKTVNNVRGTPGRTVQSVAEASFDAWVKYYRPDENTVNATVSYYTKGSLVALALDLTLRSEGAGTLDDVM
RGLWVRSGGGPITETDIAAVLAEVGGRSLASELTAWVHGTGELPLQPLLAKFGVAWSEELPVLAQRLGARLSDSGGLLKL
QSVLRGGAAERAGLAAGDELVALDGWRLKRIDDLSALQACERPMPLLAARDQRLLALTLPAAQAGGAVTLVAAAQADAGD
RARRHAWLGGA

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62792; Mature: 62792

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRYRLEVADALAHQFRVTLTIAQPAEEQALSLPVWIPGSYLVREFARHLSQLEARQGDR
CEEEEHHHHHHHHHCEEEEEEEECCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCC
SVPLIQSDKAGWVAHCRGRGALVVSYVVYAFDTSVRAAYLDARRGFFNGTGVFLHVHGRE
CCCEEECCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEECCC
HEPHRLRIAGLPRGWQVATALPLAGADHEAADYDELVDHPVELGRFWRGSFKAAGVPHEF
CCCCEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCHHH
IVAGALPSFDGERLLADTRRICEAQIAFWHGGKKPPFKRYVFLLNAVDDGYGGLEHRAST
EEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHEEEEEECCCCCCCCHHHHHHH
ALIANRRDLPRSGMKSAGDGYVTLLGLISHEYFHTWNVKRMRPRDFERYDYTRENYTELL
HHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCHHHHHHHH
WFFEGFTSYYDDLVLRRTGLIDEARYLKLLAKTVNNVRGTPGRTVQSVAEASFDAWVKYY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEE
RPDENTVNATVSYYTKGSLVALALDLTLRSEGAGTLDDVMRGLWVRSGGGPITETDIAAV
CCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHEEECCCCCCCHHHHHHH
LAEVGGRSLASELTAWVHGTGELPLQPLLAKFGVAWSEELPVLAQRLGARLSDSGGLLKL
HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEHH
QSVLRGGAAERAGLAAGDELVALDGWRLKRIDDLSALQACERPMPLLAARDQRLLALTLP
HHHHCCCCCHHCCCCCCCCEEEECCCEECCHHHHHHHHHHCCCCCHHHCCCCEEEEEEEC
AAQAGGAVTLVAAAQADAGDRARRHAWLGGA
CCCCCCEEEEEEECCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MIRYRLEVADALAHQFRVTLTIAQPAEEQALSLPVWIPGSYLVREFARHLSQLEARQGDR
CEEEEHHHHHHHHHCEEEEEEEECCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCC
SVPLIQSDKAGWVAHCRGRGALVVSYVVYAFDTSVRAAYLDARRGFFNGTGVFLHVHGRE
CCCEEECCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEECCC
HEPHRLRIAGLPRGWQVATALPLAGADHEAADYDELVDHPVELGRFWRGSFKAAGVPHEF
CCCCEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCHHH
IVAGALPSFDGERLLADTRRICEAQIAFWHGGKKPPFKRYVFLLNAVDDGYGGLEHRAST
EEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHEEEEEECCCCCCCCHHHHHHH
ALIANRRDLPRSGMKSAGDGYVTLLGLISHEYFHTWNVKRMRPRDFERYDYTRENYTELL
HHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCHHHHHHHH
WFFEGFTSYYDDLVLRRTGLIDEARYLKLLAKTVNNVRGTPGRTVQSVAEASFDAWVKYY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEE
RPDENTVNATVSYYTKGSLVALALDLTLRSEGAGTLDDVMRGLWVRSGGGPITETDIAAV
CCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHEEECCCCCCCHHHHHHH
LAEVGGRSLASELTAWVHGTGELPLQPLLAKFGVAWSEELPVLAQRLGARLSDSGGLLKL
HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEHH
QSVLRGGAAERAGLAAGDELVALDGWRLKRIDDLSALQACERPMPLLAARDQRLLALTLP
HHHHCCCCCHHCCCCCCCCEEEECCCEECCHHHHHHHHHHCCCCCHHHCCCCEEEEEEEC
AAQAGGAVTLVAAAQADAGDRARRHAWLGGA
CCCCCCEEEEEEECCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA