Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is fliK [C]
Identifier: 124265763
GI number: 124265763
Start: 602026
End: 603525
Strand: Direct
Name: fliK [C]
Synonym: Mpe_A0570
Alternate gene names: 124265763
Gene position: 602026-603525 (Clockwise)
Preceding gene: 124265762
Following gene: 124265764
Centisome position: 14.89
GC content: 77.33
Gene sequence:
>1500_bases ATGAGCATGAACCTGTCCGTCCAGCAGCGCGCTGCCGCCAACGCCCCGACCGCCTTCGCGGCCGAACCGGCGGCCGAGCG CGGCAACTCCCCAGCCTCTTCGCCGTTCGCCGGCCTGCTCGGGGAGCGGCAGCGCTTCGTGGCGGGCCATGGACAGAATG GCCAGAACGCCTTCGCCGCGCCACCGGCCCCCGCGAAGGCGAACCCGCCCGAGTCGCGCGCCGAGGCCGCACGCCGGCCG GAGCCGCAGCGTCGTCCCGCCGGCGACGAGGCGAAACCGATCGAGAAGGACAACACCGCGGCGAAGCGGGCGGCGGCCAA GGACGGAGTCGCGCCGCCGGCGGCCAAGCAGCCCGGCAAGCCCGTCGACGGCGCACGGCGCACCGCCGACGAGGCGTCCG ACGAGGGGCTGCCGGCGGATGAAGCCGACGCAGCCCTGGTCGAGCCGGTCGACGAGGCCTCCGCCAGCGACGCGGCCGAT GCGGCGGCGGCGGCCCAGCCGGCGCCCGCTGCTCCCGATCCGAAAGTGATGCTCGACTGGCTGGCCCGCTGGGGCACGGT CGCGCCGCCACGTGCCGCAGGCCATGCGACCACGCCCCCAGACGATGCCGATCCGGCTGCCGAGTCCGTGGTCCCGGGCG CAATGGCCGGTGCGAGCGCGGCGGGCGACCTGCGCCCGCCGGGCCCCGGCGTCGCTGAGGCCGACGGCGGCCGCCCGCTT GCCGGCAACGACGCCCGGCGTGCCGCGGCAGTCGAGCCGGCCACCGGCGCCACCGAACCCTCCGCCACGCAGGCGCTTCA TGCCGCCCATGCCGACGCGCAGGCCGAAGCGAAGGCCGGCGCCAGGGCCGTGGCGGCCGAGGCGCTGCTGCAACCCGTCC CCGCCGGGTCTGCGCCCGCCGCCGGCTCGCGCGAACTCGCGATGGCGGCGTTGACGGCGGCCGAACCGGTGCGCGGCGTG CCGGCATCCGAGCGGGCGCGCGTCGGCGAGCTGCTGTCGCCGGTGTCGCCGCTCGGCGGCCTGGCGATGCCGACCGCCCC CGCCGCGACCCTGTTGACCGGTGCCCCGCTGTCCCTCAGCGTCGCGACCCCGGTGCAATCGCCCGATTTCTCGCAGGCGC TGGCCAGCCAGCTCACCACGCTGGCGCGGGGCGGCGTTCACGAAGCCGAGCTGCAGCTCAACCCGGCCGACATGGGGCCG ATCGCAGTGCAGATCGTGATCGACGGCGCCCAGGCGCAGATCGATTTCACGGCCTCCCACGCCGGCACGCGCCAGGCGCT GGAGAGCAGTCTGCCGGCGCTCGCGGCGGCGCTGAACGGCGCGGGCCTGACGCTCAGCGGCGGCGGTGTGTTCGAGCAGC GCTCCGGGGGCCGCGAGGGCGCGGCCGATGGCGAGCGCCATGCCGGCGGGCGGAGCGAGACGATCGCGCTCGGCGGCATC GAGGGCCCGGCGGGCGCGCGCCCACCCGCGGCCCGCGGCCTGCTCGACCTCTACGCCTAG
Upstream 100 bases:
>100_bases AGGCGACCGACGAGCTGGCCTCGCGAGCCGCATGGCTGCGGCTGGCAGGCACCGCACCCGGCGCGGCGCTGGGCGCCGTC TGAGCCGGTACCTGCCCGCC
Downstream 100 bases:
>100_bases CACGCGGCGCACGCCGCGGCGGTGGCAGGGGGCGGCGGTAAGCGCCGGTTTCGCCCCCCTTATCGCGGCTTCGCCGTGAG GGCCGGCTCGAATAATCCTT
Product: flagellar hook-length control protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MSMNLSVQQRAAANAPTAFAAEPAAERGNSPASSPFAGLLGERQRFVAGHGQNGQNAFAAPPAPAKANPPESRAEAARRP EPQRRPAGDEAKPIEKDNTAAKRAAAKDGVAPPAAKQPGKPVDGARRTADEASDEGLPADEADAALVEPVDEASASDAAD AAAAAQPAPAAPDPKVMLDWLARWGTVAPPRAAGHATTPPDDADPAAESVVPGAMAGASAAGDLRPPGPGVAEADGGRPL AGNDARRAAAVEPATGATEPSATQALHAAHADAQAEAKAGARAVAAEALLQPVPAGSAPAAGSRELAMAALTAAEPVRGV PASERARVGELLSPVSPLGGLAMPTAPAATLLTGAPLSLSVATPVQSPDFSQALASQLTTLARGGVHEAELQLNPADMGP IAVQIVIDGAQAQIDFTASHAGTRQALESSLPALAAALNGAGLTLSGGGVFEQRSGGREGAADGERHAGGRSETIALGGI EGPAGARPPAARGLLDLYA
Sequences:
>Translated_499_residues MSMNLSVQQRAAANAPTAFAAEPAAERGNSPASSPFAGLLGERQRFVAGHGQNGQNAFAAPPAPAKANPPESRAEAARRP EPQRRPAGDEAKPIEKDNTAAKRAAAKDGVAPPAAKQPGKPVDGARRTADEASDEGLPADEADAALVEPVDEASASDAAD AAAAAQPAPAAPDPKVMLDWLARWGTVAPPRAAGHATTPPDDADPAAESVVPGAMAGASAAGDLRPPGPGVAEADGGRPL AGNDARRAAAVEPATGATEPSATQALHAAHADAQAEAKAGARAVAAEALLQPVPAGSAPAAGSRELAMAALTAAEPVRGV PASERARVGELLSPVSPLGGLAMPTAPAATLLTGAPLSLSVATPVQSPDFSQALASQLTTLARGGVHEAELQLNPADMGP IAVQIVIDGAQAQIDFTASHAGTRQALESSLPALAAALNGAGLTLSGGGVFEQRSGGREGAADGERHAGGRSETIALGGI EGPAGARPPAARGLLDLYA >Mature_498_residues SMNLSVQQRAAANAPTAFAAEPAAERGNSPASSPFAGLLGERQRFVAGHGQNGQNAFAAPPAPAKANPPESRAEAARRPE PQRRPAGDEAKPIEKDNTAAKRAAAKDGVAPPAAKQPGKPVDGARRTADEASDEGLPADEADAALVEPVDEASASDAADA AAAAQPAPAAPDPKVMLDWLARWGTVAPPRAAGHATTPPDDADPAAESVVPGAMAGASAAGDLRPPGPGVAEADGGRPLA GNDARRAAAVEPATGATEPSATQALHAAHADAQAEAKAGARAVAAEALLQPVPAGSAPAAGSRELAMAALTAAEPVRGVP ASERARVGELLSPVSPLGGLAMPTAPAATLLTGAPLSLSVATPVQSPDFSQALASQLTTLARGGVHEAELQLNPADMGPI AVQIVIDGAQAQIDFTASHAGTRQALESSLPALAAALNGAGLTLSGGGVFEQRSGGREGAADGERHAGGRSETIALGGIE GPAGARPPAARGLLDLYA
Specific function: Controls The Length Of The Flagellar Hook. [C]
COG id: COG3144
COG function: function code N; Flagellar hook-length control protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49130; Mature: 48998
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMNLSVQQRAAANAPTAFAAEPAAERGNSPASSPFAGLLGERQRFVAGHGQNGQNAFAA CCCCCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC PPAPAKANPPESRAEAARRPEPQRRPAGDEAKPIEKDNTAAKRAAAKDGVAPPAAKQPGK CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC PVDGARRTADEASDEGLPADEADAALVEPVDEASASDAADAAAAAQPAPAAPDPKVMLDW CCCHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHH LARWGTVAPPRAAGHATTPPDDADPAAESVVPGAMAGASAAGDLRPPGPGVAEADGGRPL HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC AGNDARRAAAVEPATGATEPSATQALHAAHADAQAEAKAGARAVAAEALLQPVPAGSAPA CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC AGSRELAMAALTAAEPVRGVPASERARVGELLSPVSPLGGLAMPTAPAATLLTGAPLSLS CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEE VATPVQSPDFSQALASQLTTLARGGVHEAELQLNPADMGPIAVQIVIDGAQAQIDFTASH EECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCEEEEEEHHC AGTRQALESSLPALAAALNGAGLTLSGGGVFEQRSGGREGAADGERHAGGRSETIALGGI HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHCCCCCCCCCCCHHHCCCCCCEEEEECC EGPAGARPPAARGLLDLYA CCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SMNLSVQQRAAANAPTAFAAEPAAERGNSPASSPFAGLLGERQRFVAGHGQNGQNAFAA CCCCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC PPAPAKANPPESRAEAARRPEPQRRPAGDEAKPIEKDNTAAKRAAAKDGVAPPAAKQPGK CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC PVDGARRTADEASDEGLPADEADAALVEPVDEASASDAADAAAAAQPAPAAPDPKVMLDW CCCHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHH LARWGTVAPPRAAGHATTPPDDADPAAESVVPGAMAGASAAGDLRPPGPGVAEADGGRPL HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC AGNDARRAAAVEPATGATEPSATQALHAAHADAQAEAKAGARAVAAEALLQPVPAGSAPA CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC AGSRELAMAALTAAEPVRGVPASERARVGELLSPVSPLGGLAMPTAPAATLLTGAPLSLS CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEE VATPVQSPDFSQALASQLTTLARGGVHEAELQLNPADMGPIAVQIVIDGAQAQIDFTASH EECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCEEEEEEHHC AGTRQALESSLPALAAALNGAGLTLSGGGVFEQRSGGREGAADGERHAGGRSETIALGGI HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHCCCCCCCCCCCHHHCCCCCCEEEEECC EGPAGARPPAARGLLDLYA CCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA