Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is fliJ
Identifier: 124265762
GI number: 124265762
Start: 601532
End: 602008
Strand: Direct
Name: fliJ
Synonym: Mpe_A0569
Alternate gene names: NA
Gene position: 601532-602008 (Clockwise)
Preceding gene: 124265761
Following gene: 124265763
Centisome position: 14.87
GC content: 72.33
Gene sequence:
>477_bases ATGAGCGCCCTCCAGCCCCTGAACACCCTGCTCGAACAGACCACGGTCGCGCGCGATGCCGCGCTGGGCGTCCACCGCAA CGCGCTGAACGCCGTGGCGGCGGCCCAGGCCCAGGCCACGCAGCTGGCCGAGTACCGCCAGGAGTACGCGCAACGCTTCG GGACGCAGTTCCAGCGCGCCGGGGCGATCGAGCTGCTGCAGTGCTACCAGGGCTTCATGGTCCGGCTGGACGAGGCGGTG TCGCAGCAGCAGCGCCTGCTGGCGCAGGCCATCGAGCGTGGCGAGACGGCCAAGGCCGCGCTGCTGAGCGCCGAACTGCG TGTGGCTTCGGTGCGCAAGCTGATCGAGCGGCGCATCGCCGAAGCCGTTCGCACCCAGGACCGCAGCGATCAGAAGGCGA CCGACGAGCTGGCCTCGCGAGCCGCATGGCTGCGGCTGGCAGGCACCGCACCCGGCGCGGCGCTGGGCGCCGTCTGA
Upstream 100 bases:
>100_bases ACGCCTCGCGGCTGACCGACAGCGTGCGCCAGTTGCGCCAGCTGACCGGCATCTGACCCGCGAGCCCCACCGACCGAACG TTCGCCCCCGGAAAGACTCC
Downstream 100 bases:
>100_bases GCCGGTACCTGCCCGCCATGAGCATGAACCTGTCCGTCCAGCAGCGCGCTGCCGCCAACGCCCCGACCGCCTTCGCGGCC GAACCGGCGGCCGAGCGCGG
Product: flagellar biosynthesis chaperone
Products: NA
Alternate protein names: Flagellar Export Protein FliJ
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSALQPLNTLLEQTTVARDAALGVHRNALNAVAAAQAQATQLAEYRQEYAQRFGTQFQRAGAIELLQCYQGFMVRLDEAV SQQQRLLAQAIERGETAKAALLSAELRVASVRKLIERRIAEAVRTQDRSDQKATDELASRAAWLRLAGTAPGAALGAV
Sequences:
>Translated_158_residues MSALQPLNTLLEQTTVARDAALGVHRNALNAVAAAQAQATQLAEYRQEYAQRFGTQFQRAGAIELLQCYQGFMVRLDEAV SQQQRLLAQAIERGETAKAALLSAELRVASVRKLIERRIAEAVRTQDRSDQKATDELASRAAWLRLAGTAPGAALGAV >Mature_157_residues SALQPLNTLLEQTTVARDAALGVHRNALNAVAAAQAQATQLAEYRQEYAQRFGTQFQRAGAIELLQCYQGFMVRLDEAVS QQQRLLAQAIERGETAKAALLSAELRVASVRKLIERRIAEAVRTQDRSDQKATDELASRAAWLRLAGTAPGAALGAV
Specific function: Unknown
COG id: COG2882
COG function: function code NUO; Flagellar biosynthesis chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17146; Mature: 17014
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALQPLNTLLEQTTVARDAALGVHRNALNAVAAAQAQATQLAEYRQEYAQRFGTQFQRA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAIELLQCYQGFMVRLDEAVSQQQRLLAQAIERGETAKAALLSAELRVASVRKLIERRIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EAVRTQDRSDQKATDELASRAAWLRLAGTAPGAALGAV HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC >Mature Secondary Structure SALQPLNTLLEQTTVARDAALGVHRNALNAVAAAQAQATQLAEYRQEYAQRFGTQFQRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAIELLQCYQGFMVRLDEAVSQQQRLLAQAIERGETAKAALLSAELRVASVRKLIERRIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EAVRTQDRSDQKATDELASRAAWLRLAGTAPGAALGAV HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA