Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is fliI [H]
Identifier: 124265761
GI number: 124265761
Start: 600024
End: 601487
Strand: Direct
Name: fliI [H]
Synonym: Mpe_A0568
Alternate gene names: 124265761
Gene position: 600024-601487 (Clockwise)
Preceding gene: 124265760
Following gene: 124265762
Centisome position: 14.84
GC content: 72.47
Gene sequence:
>1464_bases ATGAACGCCCCGACCGAAGGCTGGCTGCCCGCCGCCACGCCGGCGACCGAGCGCCCTGCAGCGCCGCCCGCCGCGCTGCC GGCGTCGTGGCAACGCTACATGGATGATCTGAAGGCGCATGCCCTCGGCCCGGTGCCGCTGGAGGCGCAGGGCACGCTGG TGCGCGTGGCCGGACTGGTGCTGGAGGCCGCCGGCATCCGCGTGCCGGTCGGCTCGGTCTGCGAGGTGCGCATGGACGGC CAGCCGCCCGTGCTGGCTGAGGTGGTCGGCTTCGCCGCCGACCGTGCCTACCTGATGCCCACCGGCGAGCTGCACGGCCT GGCCAGCGGCGCGCGGGTGGTCCCGCGCTCGACCCCGAGCGTGGCGCCGGTGCTCGGCGAGGCGCATCACCCGTGGCGTC GCAGCGAAGACCGCACCCGCCACCTGCCGATCGGCGACGGCCTGCTGGGCCGCGTGATCGACCCGCTGGGCATGCCGCTC GACCGGCTCGGCCCGATCGGCGCCGTGCGCAACGAGCCGCTGGTGCGTCGCCCCATCAACGCGATGGAGCGCGACCCGGT GCGCGAGCCGCTGGACACGGGCGTGCGCGCGATCAACGCCATGCTCACCGTCGGCCGCGGCCAGCGCATCGGGCTGTTCG CCGGCTCCGGCGTCGGCAAGTCGGTGCTGCTGGGCATGATGGCCAAGTACACCGCGGCCGACGTCATCGTCGTCGGCCTG ATCGGCGAGCGCGGACGCGAGGTCAAGGAATTCATCGAGGACATCCTCGGCGAGGAGGGCCTGAAGCGCTCCATCGTCGT GGCGGCGCCGGCCGACTCGCCGCCGCTGACGCGCATGCAGGGGGCCGCCTACGCCACCGCGATCGCCGAGCACTTCCGCG ACCGCGGCCAGCACGTGCTGCTGCTGATGGACAGCCTGACCCGTTACGCGATGGCGCAACGCGAGATCGCGCTGGCCATC GGCGAACCGCCGGCCACCAAGGGCTATCCGCCGAGCTGCTTCGCGAAGCTGCCGCAACTGGTCGAGCGCAGCGGCAACGG CCTCAACGGCTGCGGTTCGATCACCGCGTTCTACACGGTGCTCAGCGAAGGCGACGACCAGCAGGACCCGATCGCCGACG CGGCCCGCGCCATCCTCGACGGCCACATCGTGCTGTCGCGCGACCTGGCCGAGAGTGGCCATTACCCGGCGATCGACATC GAACGCTCGGCCTCGCGCGTGATGCACAACGTGGCACGGCCCGAACACCTGCAGGCGGCGCGCCGCCTGCGCCAGCTGTG GTCGCGCTATCAGAAGGCGCGCGACCTGATCGCGCTGGGCGCCTATGCGCCCGGCCACGATGTCGAACTCGACCTCGCGG TCAAGCAGCACGATGCGATGCGCACGCTGCTGCAGCAGGACATGCACGACGCCTCGCGGCTGACCGACAGCGTGCGCCAG TTGCGCCAGCTGACCGGCATCTGA
Upstream 100 bases:
>100_bases GCCGTGCCATGGACGGCATGGGACAGCGCGCTGCCTACGAGGTGGCGCCGTCGGCCGACGACGCGGCCGCACCGGTGACC GACGAGAACGGGGCGGGCGC
Downstream 100 bases:
>100_bases CCCGCGAGCCCCACCGACCGAACGTTCGCCCCCGGAAAGACTCCATGAGCGCCCTCCAGCCCCTGAACACCCTGCTCGAA CAGACCACGGTCGCGCGCGA
Product: flagellar biosynthesis ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MNAPTEGWLPAATPATERPAAPPAALPASWQRYMDDLKAHALGPVPLEAQGTLVRVAGLVLEAAGIRVPVGSVCEVRMDG QPPVLAEVVGFAADRAYLMPTGELHGLASGARVVPRSTPSVAPVLGEAHHPWRRSEDRTRHLPIGDGLLGRVIDPLGMPL DRLGPIGAVRNEPLVRRPINAMERDPVREPLDTGVRAINAMLTVGRGQRIGLFAGSGVGKSVLLGMMAKYTAADVIVVGL IGERGREVKEFIEDILGEEGLKRSIVVAAPADSPPLTRMQGAAYATAIAEHFRDRGQHVLLLMDSLTRYAMAQREIALAI GEPPATKGYPPSCFAKLPQLVERSGNGLNGCGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRDLAESGHYPAIDI ERSASRVMHNVARPEHLQAARRLRQLWSRYQKARDLIALGAYAPGHDVELDLAVKQHDAMRTLLQQDMHDASRLTDSVRQ LRQLTGI
Sequences:
>Translated_487_residues MNAPTEGWLPAATPATERPAAPPAALPASWQRYMDDLKAHALGPVPLEAQGTLVRVAGLVLEAAGIRVPVGSVCEVRMDG QPPVLAEVVGFAADRAYLMPTGELHGLASGARVVPRSTPSVAPVLGEAHHPWRRSEDRTRHLPIGDGLLGRVIDPLGMPL DRLGPIGAVRNEPLVRRPINAMERDPVREPLDTGVRAINAMLTVGRGQRIGLFAGSGVGKSVLLGMMAKYTAADVIVVGL IGERGREVKEFIEDILGEEGLKRSIVVAAPADSPPLTRMQGAAYATAIAEHFRDRGQHVLLLMDSLTRYAMAQREIALAI GEPPATKGYPPSCFAKLPQLVERSGNGLNGCGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRDLAESGHYPAIDI ERSASRVMHNVARPEHLQAARRLRQLWSRYQKARDLIALGAYAPGHDVELDLAVKQHDAMRTLLQQDMHDASRLTDSVRQ LRQLTGI >Mature_487_residues MNAPTEGWLPAATPATERPAAPPAALPASWQRYMDDLKAHALGPVPLEAQGTLVRVAGLVLEAAGIRVPVGSVCEVRMDG QPPVLAEVVGFAADRAYLMPTGELHGLASGARVVPRSTPSVAPVLGEAHHPWRRSEDRTRHLPIGDGLLGRVIDPLGMPL DRLGPIGAVRNEPLVRRPINAMERDPVREPLDTGVRAINAMLTVGRGQRIGLFAGSGVGKSVLLGMMAKYTAADVIVVGL IGERGREVKEFIEDILGEEGLKRSIVVAAPADSPPLTRMQGAAYATAIAEHFRDRGQHVLLLMDSLTRYAMAQREIALAI GEPPATKGYPPSCFAKLPQLVERSGNGLNGCGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRDLAESGHYPAIDI ERSASRVMHNVARPEHLQAARRLRQLWSRYQKARDLIALGAYAPGHDVELDLAVKQHDAMRTLLQQDMHDASRLTDSVRQ LRQLTGI
Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum [H]
COG id: COG1157
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase alpha/beta chains family [H]
Homologues:
Organism=Homo sapiens, GI32189394, Length=311, Percent_Identity=32.475884244373, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI50345984, Length=341, Percent_Identity=29.6187683284457, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI4757810, Length=341, Percent_Identity=29.6187683284457, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI19913424, Length=248, Percent_Identity=31.4516129032258, Blast_Score=115, Evalue=9e-26, Organism=Homo sapiens, GI19913428, Length=320, Percent_Identity=26.5625, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI19913426, Length=320, Percent_Identity=26.5625, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1788251, Length=437, Percent_Identity=59.7254004576659, Blast_Score=467, Evalue=1e-133, Organism=Escherichia coli, GI1790170, Length=303, Percent_Identity=33.3333333333333, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1790172, Length=354, Percent_Identity=26.5536723163842, Blast_Score=118, Evalue=9e-28, Organism=Escherichia coli, GI1790217, Length=241, Percent_Identity=28.6307053941909, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25144756, Length=312, Percent_Identity=32.0512820512821, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI71988080, Length=342, Percent_Identity=29.8245614035088, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71988063, Length=342, Percent_Identity=29.8245614035088, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71988074, Length=328, Percent_Identity=28.0487804878049, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17565854, Length=318, Percent_Identity=28.6163522012579, Blast_Score=114, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17510931, Length=317, Percent_Identity=27.4447949526814, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17570191, Length=317, Percent_Identity=26.1829652996845, Blast_Score=106, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6322581, Length=309, Percent_Identity=33.0097087378641, Blast_Score=153, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6319370, Length=342, Percent_Identity=30.1169590643275, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6319603, Length=320, Percent_Identity=28.125, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6320016, Length=263, Percent_Identity=27.3764258555133, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI24638766, Length=310, Percent_Identity=32.258064516129, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI28574560, Length=308, Percent_Identity=31.4935064935065, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24658560, Length=356, Percent_Identity=28.6516853932584, Blast_Score=126, Evalue=4e-29, Organism=Drosophila melanogaster, GI20129479, Length=320, Percent_Identity=29.0625, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24583992, Length=320, Percent_Identity=27.8125, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24583988, Length=322, Percent_Identity=27.3291925465839, Blast_Score=119, Evalue=7e-27, Organism=Drosophila melanogaster, GI24583986, Length=322, Percent_Identity=27.3291925465839, Blast_Score=119, Evalue=7e-27, Organism=Drosophila melanogaster, GI24583984, Length=322, Percent_Identity=27.3291925465839, Blast_Score=119, Evalue=7e-27, Organism=Drosophila melanogaster, GI281361666, Length=324, Percent_Identity=27.4691358024691, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24646341, Length=324, Percent_Identity=27.4691358024691, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI17136796, Length=324, Percent_Identity=27.4691358024691, Blast_Score=110, Evalue=2e-24,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020003 - InterPro: IPR000194 - InterPro: IPR003593 - InterPro: IPR005714 - InterPro: IPR020005 [H]
Pfam domain/function: PF00006 ATP-synt_ab [H]
EC number: =3.6.3.14 [H]
Molecular weight: Translated: 52429; Mature: 52429
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPTEGWLPAATPATERPAAPPAALPASWQRYMDDLKAHALGPVPLEAQGTLVRVAGLV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LEAAGIRVPVGSVCEVRMDGQPPVLAEVVGFAADRAYLMPTGELHGLASGARVVPRSTPS HHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHCCCCCEECCCCCCC VAPVLGEAHHPWRRSEDRTRHLPIGDGLLGRVIDPLGMPLDRLGPIGAVRNEPLVRRPIN HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCHHHCCHH AMERDPVREPLDTGVRAINAMLTVGRGQRIGLFAGSGVGKSVLLGMMAKYTAADVIVVGL HHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHEEEEEE IGERGREVKEFIEDILGEEGLKRSIVVAAPADSPPLTRMQGAAYATAIAEHFRDRGQHVL CCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCEEE LLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPQLVERSGNGLNGCGSITAFYTV EHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LSEGDDQQDPIADAARAILDGHIVLSRDLAESGHYPAIDIERSASRVMHNVARPEHLQAA HHCCCCCCCHHHHHHHHHHCCCEEEEHHHHHCCCCCCEECHHHHHHHHHHHCCCHHHHHH RRLRQLWSRYQKARDLIALGAYAPGHDVELDLAVKQHDAMRTLLQQDMHDASRLTDSVRQ HHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQLTGI HHHHHCC >Mature Secondary Structure MNAPTEGWLPAATPATERPAAPPAALPASWQRYMDDLKAHALGPVPLEAQGTLVRVAGLV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LEAAGIRVPVGSVCEVRMDGQPPVLAEVVGFAADRAYLMPTGELHGLASGARVVPRSTPS HHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHCCCCCEECCCCCCC VAPVLGEAHHPWRRSEDRTRHLPIGDGLLGRVIDPLGMPLDRLGPIGAVRNEPLVRRPIN HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCHHHCCHH AMERDPVREPLDTGVRAINAMLTVGRGQRIGLFAGSGVGKSVLLGMMAKYTAADVIVVGL HHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHEEEEEE IGERGREVKEFIEDILGEEGLKRSIVVAAPADSPPLTRMQGAAYATAIAEHFRDRGQHVL CCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCEEE LLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPQLVERSGNGLNGCGSITAFYTV EHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LSEGDDQQDPIADAARAILDGHIVLSRDLAESGHYPAIDIERSASRVMHNVARPEHLQAA HHCCCCCCCHHHHHHHHHHCCCEEEEHHHHHCCCCCCEECHHHHHHHHHHHCCCHHHHHH RRLRQLWSRYQKARDLIALGAYAPGHDVELDLAVKQHDAMRTLLQQDMHDASRLTDSVRQ HHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQLTGI HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]