Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is fliH [C]
Identifier: 124265760
GI number: 124265760
Start: 599221
End: 600027
Strand: Direct
Name: fliH [C]
Synonym: Mpe_A0567
Alternate gene names: 124265760
Gene position: 599221-600027 (Clockwise)
Preceding gene: 124265759
Following gene: 124265761
Centisome position: 14.82
GC content: 74.47
Gene sequence:
>807_bases ATGACCAGTTCCTTTGAACGCAAGCTCGGCGCCAGCCCGGCGCCGCGCGATCCCGGCAGCCGCAGCCGCGCAACCGACGG CCCGGCGGCCGACGGCTCGCCGAACGCCTATGCGCGCTTCATTCCGCGCGAGGAAGTGCGCAGCTTCGCCGCCTGGCGGC CCAGCAGCTTCGGCAGCGCACCGCAGAACCCGGCGGCCCCGGCACCCGCCGCGCCGCTGACGCCCGAACTGGTGGCCGCG CAGTTGCAGGCCGCGCGCCAGAGCGGCTACCAGGACGGCTACCGCGACGGTCTGACCGCGCTCGAAGGTTTCAAGCAGAG TTACGCGCAGCAGGTGACTGGCCAGGTCACCGCCGTGGCGCAGGCCTTCCGCGGCCAGCTCCAGCAACTCGAACAGGGCC TGGCCGCGCAGCTCGCGGACGTGGCCGTCGCGCTGGCGCGCCAGGTGCTGCGCAGCGAACTGGCAACGCGCCCCGAGCTG GTGGCGGCGGTGGCCCAGGAGGCGCTGGTCGCCACGCTGGCCTCGGCGAAGCAGGTGGCGGTGCACGTGCATCCCGAGGA CCTCGCCTTGCTGAGCCTGCACGCCGGCGAGGCGCTGGCCGCGCGTGGCGCGCGCCTGGTGCCCGATGCGGCCCTGGCAC GCGGCGGCTGCGTCGTCGACAGCGAGGTCGGCATCATCGATGCCAGCATCGAGGCGCGCTGGCGCCGTGCCATGGACGGC ATGGGACAGCGCGCTGCCTACGAGGTGGCGCCGTCGGCCGACGACGCGGCCGCACCGGTGACCGACGAGAACGGGGCGGG CGCATGA
Upstream 100 bases:
>100_bases CCGGTGCGCGTCTCCGAGGTCGAGGCCGAGCAGAAGGAAATGCTGAAGATCGTGCGTCGCCTGGCCGACGAGGGCCAGAT CGTGCTGGGTGGCGGTGGCG
Downstream 100 bases:
>100_bases ACGCCCCGACCGAAGGCTGGCTGCCCGCCGCCACGCCGGCGACCGAGCGCCCTGCAGCGCCGCCCGCCGCGCTGCCGGCG TCGTGGCAACGCTACATGGA
Product: flagellar biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTSSFERKLGASPAPRDPGSRSRATDGPAADGSPNAYARFIPREEVRSFAAWRPSSFGSAPQNPAAPAPAAPLTPELVAA QLQAARQSGYQDGYRDGLTALEGFKQSYAQQVTGQVTAVAQAFRGQLQQLEQGLAAQLADVAVALARQVLRSELATRPEL VAAVAQEALVATLASAKQVAVHVHPEDLALLSLHAGEALAARGARLVPDAALARGGCVVDSEVGIIDASIEARWRRAMDG MGQRAAYEVAPSADDAAAPVTDENGAGA
Sequences:
>Translated_268_residues MTSSFERKLGASPAPRDPGSRSRATDGPAADGSPNAYARFIPREEVRSFAAWRPSSFGSAPQNPAAPAPAAPLTPELVAA QLQAARQSGYQDGYRDGLTALEGFKQSYAQQVTGQVTAVAQAFRGQLQQLEQGLAAQLADVAVALARQVLRSELATRPEL VAAVAQEALVATLASAKQVAVHVHPEDLALLSLHAGEALAARGARLVPDAALARGGCVVDSEVGIIDASIEARWRRAMDG MGQRAAYEVAPSADDAAAPVTDENGAGA >Mature_267_residues TSSFERKLGASPAPRDPGSRSRATDGPAADGSPNAYARFIPREEVRSFAAWRPSSFGSAPQNPAAPAPAAPLTPELVAAQ LQAARQSGYQDGYRDGLTALEGFKQSYAQQVTGQVTAVAQAFRGQLQQLEQGLAAQLADVAVALARQVLRSELATRPELV AAVAQEALVATLASAKQVAVHVHPEDLALLSLHAGEALAARGARLVPDAALARGGCVVDSEVGIIDASIEARWRRAMDGM GQRAAYEVAPSADDAAAPVTDENGAGA
Specific function: Needed For Flagellar Regrowth And Assembly. [C]
COG id: COG1317
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27713; Mature: 27582
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSFERKLGASPAPRDPGSRSRATDGPAADGSPNAYARFIPREEVRSFAAWRPSSFGSA CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCC PQNPAAPAPAAPLTPELVAAQLQAARQSGYQDGYRDGLTALEGFKQSYAQQVTGQVTAVA CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAFRGQLQQLEQGLAAQLADVAVALARQVLRSELATRPELVAAVAQEALVATLASAKQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEE VHVHPEDLALLSLHAGEALAARGARLVPDAALARGGCVVDSEVGIIDASIEARWRRAMDG EEECCCCEEEEECCCCHHHHHCCCCCCCHHHHHCCCEEEECCCCEEECHHHHHHHHHHHC MGQRAAYEVAPSADDAAAPVTDENGAGA CCCHHHEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSSFERKLGASPAPRDPGSRSRATDGPAADGSPNAYARFIPREEVRSFAAWRPSSFGSA CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCC PQNPAAPAPAAPLTPELVAAQLQAARQSGYQDGYRDGLTALEGFKQSYAQQVTGQVTAVA CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAFRGQLQQLEQGLAAQLADVAVALARQVLRSELATRPELVAAVAQEALVATLASAKQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEE VHVHPEDLALLSLHAGEALAARGARLVPDAALARGGCVVDSEVGIIDASIEARWRRAMDG EEECCCCEEEEECCCCHHHHHCCCCCCCHHHHHCCCEEEECCCCEEECHHHHHHHHHHHC MGQRAAYEVAPSADDAAAPVTDENGAGA CCCHHHEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA