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The map label for this gene is fliF [H]

Identifier: 124265758

GI number: 124265758

Start: 596477

End: 598180

Strand: Direct

Name: fliF [H]

Synonym: Mpe_A0565

Alternate gene names: 124265758

Gene position: 596477-598180 (Clockwise)

Preceding gene: 124265756

Following gene: 124265759

Centisome position: 14.75

GC content: 71.13

Gene sequence:

>1704_bases
ATGGACACCGCACTTGCCCCCGTGAATTCCCTGCCGCTCACGCCGGCCAACGCCGACGGCTTTGGCTCGCGCCTCGCTGC
GCTGCCCGCCGGCCGCAAGTTCACGCTCGGCATCGGCCTGGCCGCGCTGGTGGGCATCGCCTTCGCGATGTCGATGTGGT
CTTCGCAGGGCAACTACAAGGTGCTGTACGCCGGCCTGTCCGACAAGGACGGTGGCGCGATCCTGGCCCAGCTGTCGACG
ATGAACGTGCCCTACAAGCACGCCGACGGCGGCGCCGCGATCCTGGTGCCGGCCGACAAGGTGCACGACGTGCGCCTGAA
GCTGGCCTCGGCCGGCCTGCCCAAGGGCTCGATCGTCGGCTTCGAGCTGATGGACAACGCCAAGTTCGGCCAGACGCAGT
TCCAGGAGCGCCTGACCTTCCAGCGCGGTCTCGAGGGCGAGCTGACCCGCTCGATCGGTGCGCTGGCCGCGGTGCAGAGC
GCCCGCGTTCACCTCGCGCTGCCCAACCAGAACGGCTTCTTCCGCGAACAGCAGAAGCCCAGCGCCTCGGTGCTGCTGAC
GCTGCACCCCGGCCGCACGCTCGACCGCACGCAGATTGCCGGCATCGTTCACCTCGTGTCGTCGAGTGTCCCCGAGATGG
ACCCGAAGGCGGTGACCGTGCTCGACGCCACCGGCGCGCTGATCTCCGGCGCCGGCGACGCCGGTTCGGCCGGCGGCCTG
GACGCCCAGCAACTGCAGTACGTGGGCCAGATCGAGGGCAACTACACCAAGCGCGTGTTCGACATCCTCGAGCCGGTGCT
GGGCCGCGACAACCTGCGCGCCCAGGTCACCGCCGAAGTCGATTTCTCGCAGACCGAATCCACCTCCGAGGCCTATGCGC
CGAACCAGGGCCTGGGCGCCGACGGCAAGCCGGCCGCGGCCACCCTGCGCAGCCACCAGGTCAGCGAGGCCAGCGGCGGC
GGCAGCGCCCAGCCGGCCGGCGTGCCCGGCGCCGCCAGCAACCAGCCGCCGGTGCCGGCCACCGCGCCGGTCAACGGCAG
TGCGCAGCCGCTGCAGACCGCGCAGTCGGGCGGCGGCAGCGGCGGTAACAGCCGGCGCGAGGCCACCACCAACTACGAGG
TCGACAAGACCGTGCGCGTCACGCGCAACGCTACCGGCACCATCAAGCGCCTGAACGCGGCGGTGGTGCTGAACCACCGC
TCGGTGACCGACGCCAAGGGCAAGACCAGCACCACGCCGATCTCGGCCGAGGAGATGGAAAAGCTCACCGCGCTGGTCAA
GGAGACCATCGGCTTCAACGCCGACCGCGGTGACTCGGTGAAGCTGATCAACGCGCCCTTCAAGGTCGAGAAGCCGCCGG
TCGAGGAAGCACTGCCGCTGTGGAAGCAGCCCGAGACCCAGGATCTGCTGCGCACGCTGGCCGTGCCGGGCGCGCTGACG
CTGCTGGCGATGATCATCGTGTTCGGTGCGGTGCGGCCGGCGCTGAAGGCGGCCCAGCCGGCCCAGCCGCAGCGCCAGCT
CGACGCCGTGGTCGACGACGTGCCGGCGCTGCCGTCCCCGTCGTCGGCCCAGGCCGCGGCCCTGCCCGCGCTCGAGGCGC
CGGTGGTGGACACGCGGCTGAACCAGGCCCGTGCGCTCGCCAAGGAAAACCCGGCGGCCATGGCCAACATCGTGCGCGGC
TGGTCCGCCAAGGAGGCCGCATGA

Upstream 100 bases:

>100_bases
AAGGGTAACGAAACAATGCCGAGGCGCCGATGGGAATGGTCCCATCGCGCTTCGACCCACGATCCGACACGGACACGCCG
CGACGCCCGACCCCCTGCCG

Downstream 100 bases:

>100_bases
GCCGGCGTGAGCCCCCGCGGGAGGCCGCCGCGCCTGACGCGACCTGGGGAAGGAAGTAACCATGGATGCCCAGGGACTGG
AAGATGCGGCCATCCTGCTG

Product: flagellar biosynthesis lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MDTALAPVNSLPLTPANADGFGSRLAALPAGRKFTLGIGLAALVGIAFAMSMWSSQGNYKVLYAGLSDKDGGAILAQLST
MNVPYKHADGGAAILVPADKVHDVRLKLASAGLPKGSIVGFELMDNAKFGQTQFQERLTFQRGLEGELTRSIGALAAVQS
ARVHLALPNQNGFFREQQKPSASVLLTLHPGRTLDRTQIAGIVHLVSSSVPEMDPKAVTVLDATGALISGAGDAGSAGGL
DAQQLQYVGQIEGNYTKRVFDILEPVLGRDNLRAQVTAEVDFSQTESTSEAYAPNQGLGADGKPAAATLRSHQVSEASGG
GSAQPAGVPGAASNQPPVPATAPVNGSAQPLQTAQSGGGSGGNSRREATTNYEVDKTVRVTRNATGTIKRLNAAVVLNHR
SVTDAKGKTSTTPISAEEMEKLTALVKETIGFNADRGDSVKLINAPFKVEKPPVEEALPLWKQPETQDLLRTLAVPGALT
LLAMIIVFGAVRPALKAAQPAQPQRQLDAVVDDVPALPSPSSAQAAALPALEAPVVDTRLNQARALAKENPAAMANIVRG
WSAKEAA

Sequences:

>Translated_567_residues
MDTALAPVNSLPLTPANADGFGSRLAALPAGRKFTLGIGLAALVGIAFAMSMWSSQGNYKVLYAGLSDKDGGAILAQLST
MNVPYKHADGGAAILVPADKVHDVRLKLASAGLPKGSIVGFELMDNAKFGQTQFQERLTFQRGLEGELTRSIGALAAVQS
ARVHLALPNQNGFFREQQKPSASVLLTLHPGRTLDRTQIAGIVHLVSSSVPEMDPKAVTVLDATGALISGAGDAGSAGGL
DAQQLQYVGQIEGNYTKRVFDILEPVLGRDNLRAQVTAEVDFSQTESTSEAYAPNQGLGADGKPAAATLRSHQVSEASGG
GSAQPAGVPGAASNQPPVPATAPVNGSAQPLQTAQSGGGSGGNSRREATTNYEVDKTVRVTRNATGTIKRLNAAVVLNHR
SVTDAKGKTSTTPISAEEMEKLTALVKETIGFNADRGDSVKLINAPFKVEKPPVEEALPLWKQPETQDLLRTLAVPGALT
LLAMIIVFGAVRPALKAAQPAQPQRQLDAVVDDVPALPSPSSAQAAALPALEAPVVDTRLNQARALAKENPAAMANIVRG
WSAKEAA
>Mature_567_residues
MDTALAPVNSLPLTPANADGFGSRLAALPAGRKFTLGIGLAALVGIAFAMSMWSSQGNYKVLYAGLSDKDGGAILAQLST
MNVPYKHADGGAAILVPADKVHDVRLKLASAGLPKGSIVGFELMDNAKFGQTQFQERLTFQRGLEGELTRSIGALAAVQS
ARVHLALPNQNGFFREQQKPSASVLLTLHPGRTLDRTQIAGIVHLVSSSVPEMDPKAVTVLDATGALISGAGDAGSAGGL
DAQQLQYVGQIEGNYTKRVFDILEPVLGRDNLRAQVTAEVDFSQTESTSEAYAPNQGLGADGKPAAATLRSHQVSEASGG
GSAQPAGVPGAASNQPPVPATAPVNGSAQPLQTAQSGGGSGGNSRREATTNYEVDKTVRVTRNATGTIKRLNAAVVLNHR
SVTDAKGKTSTTPISAEEMEKLTALVKETIGFNADRGDSVKLINAPFKVEKPPVEEALPLWKQPETQDLLRTLAVPGALT
LLAMIIVFGAVRPALKAAQPAQPQRQLDAVVDDVPALPSPSSAQAAALPALEAPVVDTRLNQARALAKENPAAMANIVRG
WSAKEAA

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=550, Percent_Identity=39.8181818181818, Blast_Score=375, Evalue=1e-105,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 58823; Mature: 58823

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTALAPVNSLPLTPANADGFGSRLAALPAGRKFTLGIGLAALVGIAFAMSMWSSQGNYK
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEE
VLYAGLSDKDGGAILAQLSTMNVPYKHADGGAAILVPADKVHDVRLKLASAGLPKGSIVG
EEEECCCCCCCCEEEEEEECCCCCCEECCCCEEEEEECCCCCHHHEEHHHCCCCCCCEEE
FELMDNAKFGQTQFQERLTFQRGLEGELTRSIGALAAVQSARVHLALPNQNGFFREQQKP
EEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCC
SASVLLTLHPGRTLDRTQIAGIVHLVSSSVPEMDPKAVTVLDATGALISGAGDAGSAGGL
CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCC
DAQQLQYVGQIEGNYTKRVFDILEPVLGRDNLRAQVTAEVDFSQTESTSEAYAPNQGLGA
CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHCCCCCCCCC
DGKPAAATLRSHQVSEASGGGSAQPAGVPGAASNQPPVPATAPVNGSAQPLQTAQSGGGS
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
GGNSRREATTNYEVDKTVRVTRNATGTIKRLNAAVVLNHRSVTDAKGKTSTTPISAEEME
CCCCCCCCCCCCCCCCEEEEECCCCCHHEECCEEEEEECCCCCCCCCCCCCCCCCHHHHH
KLTALVKETIGFNADRGDSVKLINAPFKVEKPPVEEALPLWKQPETQDLLRTLAVPGALT
HHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCHHHH
LLAMIIVFGAVRPALKAAQPAQPQRQLDAVVDDVPALPSPSSAQAAALPALEAPVVDTRL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHH
NQARALAKENPAAMANIVRGWSAKEAA
HHHHHHHHCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDTALAPVNSLPLTPANADGFGSRLAALPAGRKFTLGIGLAALVGIAFAMSMWSSQGNYK
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEE
VLYAGLSDKDGGAILAQLSTMNVPYKHADGGAAILVPADKVHDVRLKLASAGLPKGSIVG
EEEECCCCCCCCEEEEEEECCCCCCEECCCCEEEEEECCCCCHHHEEHHHCCCCCCCEEE
FELMDNAKFGQTQFQERLTFQRGLEGELTRSIGALAAVQSARVHLALPNQNGFFREQQKP
EEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCC
SASVLLTLHPGRTLDRTQIAGIVHLVSSSVPEMDPKAVTVLDATGALISGAGDAGSAGGL
CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCC
DAQQLQYVGQIEGNYTKRVFDILEPVLGRDNLRAQVTAEVDFSQTESTSEAYAPNQGLGA
CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHCCCCCCCCC
DGKPAAATLRSHQVSEASGGGSAQPAGVPGAASNQPPVPATAPVNGSAQPLQTAQSGGGS
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
GGNSRREATTNYEVDKTVRVTRNATGTIKRLNAAVVLNHRSVTDAKGKTSTTPISAEEME
CCCCCCCCCCCCCCCCEEEEECCCCCHHEECCEEEEEECCCCCCCCCCCCCCCCCHHHHH
KLTALVKETIGFNADRGDSVKLINAPFKVEKPPVEEALPLWKQPETQDLLRTLAVPGALT
HHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCHHHH
LLAMIIVFGAVRPALKAAQPAQPQRQLDAVVDDVPALPSPSSAQAAALPALEAPVVDTRL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHH
NQARALAKENPAAMANIVRGWSAKEAA
HHHHHHHHCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2544561; 11677609; 1551848 [H]