Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is yedZ [H]
Identifier: 124265630
GI number: 124265630
Start: 476790
End: 477443
Strand: Direct
Name: yedZ [H]
Synonym: Mpe_A0437
Alternate gene names: 124265630
Gene position: 476790-477443 (Clockwise)
Preceding gene: 124265629
Following gene: 124265632
Centisome position: 11.79
GC content: 70.64
Gene sequence:
>654_bases ATGAGCGCCACGCTGCCGGCGCCCCGGGGTGCGCGCCGCAACGCATCGGTGCTGCTGCGGCCAGCCGCCAAGCCACTGCT GTTCGTGGCGAGCCTGCTGCCGCTCGCCTGGCTGCTCTACGGCGCCCTGGCCAACACGCTGGGCGCCAACCCGGCCGAGG CGCTGATCCGCGCCACCGGCGACTGGACGCTGCGCTTCCTCTGCCTCACGCTGGCCGTCACGCCGCTGCGGCAATGGACC GGCCAGCCGGCTTTGCTGCGCTTTCGGCGTATGCTGGGCCTGTTCACCTTCTTCTACGGCGTGCTGCACTTCCTCTGCTA CGCTTGGCTGGACATGGGCTTCGATCTCGCCGAGATCACGCGCGACATCCCGAAGCGGCCGTTCGCGCTGGTCGGCTTCG CCGCCCTGCTACTGATGGCGCCGCTGGCGGCCACCTCGTTCAACCGCGCAATCCGGGCGCTGGGCGCGAAACGCTGGCAG GCGCTGCACCGGCTTGTCTACGCCGTGGCGCTGCTAGCGATCCTGCACTTCTTCTGGATGCGCTCGGCCAAGCACAACTA TGCCGAGGTCGCGGTCTACGCGGCCATCCTCGCGGTGCTGCTGGGCTGGCGCCTGGTCGCGCACCTGCGGCGCCGGCCGG TCGCCGCAGGTTGA
Upstream 100 bases:
>100_bases GCATCTTCCAGAAGAAGCGCCCGACGCAGATGTTCAACGGCTACGAGGCGCAGGTCGGTCAGCTCTACGCGGGCCTCGAT CTCGCCAAGAACTTCTGACG
Downstream 100 bases:
>100_bases CGGCGGAGGCTCAGCTGCGCGGGATCTCGCGCGGGCTGCCGTCCATGTTGATCGCCACGTAGGTCAGGTTGGCCTCGGTC ACCTTGACCACCACCGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Flavocytochrome yedZ [H]
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSATLPAPRGARRNASVLLRPAAKPLLFVASLLPLAWLLYGALANTLGANPAEALIRATGDWTLRFLCLTLAVTPLRQWT GQPALLRFRRMLGLFTFFYGVLHFLCYAWLDMGFDLAEITRDIPKRPFALVGFAALLLMAPLAATSFNRAIRALGAKRWQ ALHRLVYAVALLAILHFFWMRSAKHNYAEVAVYAAILAVLLGWRLVAHLRRRPVAAG
Sequences:
>Translated_217_residues MSATLPAPRGARRNASVLLRPAAKPLLFVASLLPLAWLLYGALANTLGANPAEALIRATGDWTLRFLCLTLAVTPLRQWT GQPALLRFRRMLGLFTFFYGVLHFLCYAWLDMGFDLAEITRDIPKRPFALVGFAALLLMAPLAATSFNRAIRALGAKRWQ ALHRLVYAVALLAILHFFWMRSAKHNYAEVAVYAAILAVLLGWRLVAHLRRRPVAAG >Mature_216_residues SATLPAPRGARRNASVLLRPAAKPLLFVASLLPLAWLLYGALANTLGANPAEALIRATGDWTLRFLCLTLAVTPLRQWTG QPALLRFRRMLGLFTFFYGVLHFLCYAWLDMGFDLAEITRDIPKRPFALVGFAALLLMAPLAATSFNRAIRALGAKRWQA LHRLVYAVALLAILHFFWMRSAKHNYAEVAVYAAILAVLLGWRLVAHLRRRPVAAG
Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]
COG id: COG2717
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yedZ family [H]
Homologues:
Organism=Escherichia coli, GI1788283, Length=157, Percent_Identity=40.1273885350318, Blast_Score=107, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013130 - InterPro: IPR022837 [H]
Pfam domain/function: PF01794 Ferric_reduct [H]
EC number: NA
Molecular weight: Translated: 24118; Mature: 23987
Theoretical pI: Translated: 12.03; Mature: 12.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATLPAPRGARRNASVLLRPAAKPLLFVASLLPLAWLLYGALANTLGANPAEALIRATG CCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC DWTLRFLCLTLAVTPLRQWTGQPALLRFRRMLGLFTFFYGVLHFLCYAWLDMGFDLAEIT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RDIPKRPFALVGFAALLLMAPLAATSFNRAIRALGAKRWQALHRLVYAVALLAILHFFWM HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSAKHNYAEVAVYAAILAVLLGWRLVAHLRRRPVAAG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SATLPAPRGARRNASVLLRPAAKPLLFVASLLPLAWLLYGALANTLGANPAEALIRATG CCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC DWTLRFLCLTLAVTPLRQWTGQPALLRFRRMLGLFTFFYGVLHFLCYAWLDMGFDLAEIT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RDIPKRPFALVGFAALLLMAPLAATSFNRAIRALGAKRWQALHRLVYAVALLAILHFFWM HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSAKHNYAEVAVYAAILAVLLGWRLVAHLRRRPVAAG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA