Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is groES [H]
Identifier: 124265620
GI number: 124265620
Start: 463403
End: 463693
Strand: Direct
Name: groES [H]
Synonym: Mpe_A0427
Alternate gene names: 124265620
Gene position: 463403-463693 (Clockwise)
Preceding gene: 124265619
Following gene: 124265621
Centisome position: 11.46
GC content: 60.48
Gene sequence:
>291_bases ATGAAACTTCGTCCTTTGCACGATCGCGTGATCGTCAAGCGCCTCGAACAGGAAACCAAGACCGCTTCGGGCATCGTGAT CCCCGACAACGCCGCCGAGAAGCCCGACCAGGGTGAAGTGCTGGCCGTGGGTCCGGGCAAGCGCAACGACAAGGGCGACT TCATCGCCCTGAACTGCAAGGTCGGCGATCGCGTGCTGTTCGGCAAGTACAGCGGCCAGACCGTCAAGGTCGACGGTGAC GAACTGCTGGTGATGCGCGAGGAAGACCTCTTCGCCGTGGTTGAAAAGTAA
Upstream 100 bases:
>100_bases AGCCGGAGACGGCATCATCGTCTCTGGCTGCGCAATTGTGAGCTTGCGCTAACTGCGCGAAACAAGTCCGTAGATATTCG ATACCCATCAAGGAGATGCG
Downstream 100 bases:
>100_bases ATCGCGTGCGATTTGCTTTCGTCGCAGGCTGACTTCGCGCAGCGAAGTCAAGGCCCCAAGGGTCGGCCGTAGACAGAAGA ATTCCCCGGCGCGAGCCGGC
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein; Protein Cpn10 [H]
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MKLRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFIALNCKVGDRVLFGKYSGQTVKVDGD ELLVMREEDLFAVVEK
Sequences:
>Translated_96_residues MKLRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFIALNCKVGDRVLFGKYSGQTVKVDGD ELLVMREEDLFAVVEK >Mature_96_residues MKLRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFIALNCKVGDRVLFGKYSGQTVKVDGD ELLVMREEDLFAVVEK
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family [H]
Homologues:
Organism=Escherichia coli, GI1790585, Length=96, Percent_Identity=52.0833333333333, Blast_Score=95, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17555568, Length=91, Percent_Identity=43.956043956044, Blast_Score=82, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6324594, Length=93, Percent_Identity=40.8602150537634, Blast_Score=79, Evalue=1e-16, Organism=Drosophila melanogaster, GI21356029, Length=97, Percent_Identity=45.360824742268, Blast_Score=81, Evalue=1e-16, Organism=Drosophila melanogaster, GI21358317, Length=96, Percent_Identity=42.7083333333333, Blast_Score=75, Evalue=8e-15,
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 [H]
Pfam domain/function: PF00166 Cpn10 [H]
EC number: NA
Molecular weight: Translated: 10606; Mature: 10606
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFIALNCK CCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEC VGDRVLFGKYSGQTVKVDGDELLVMREEDLFAVVEK CCCEEEEEECCCCEEEECCCEEEEEECCCEEEEECC >Mature Secondary Structure MKLRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFIALNCK CCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEC VGDRVLFGKYSGQTVKVDGDELLVMREEDLFAVVEK CCCEEEEEECCCCEEEECCCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA