Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265619
Identifier: 124265619
GI number: 124265619
Start: 462458
End: 463186
Strand: Direct
Name: 124265619
Synonym: Mpe_A0426
Alternate gene names: NA
Gene position: 462458-463186 (Clockwise)
Preceding gene: 124265617
Following gene: 124265620
Centisome position: 11.44
GC content: 66.39
Gene sequence:
>729_bases ATGACGCAGATTCCCACGCTCGAGACCGCGACCACGTCGAGGATCCACATGATCGGCGGCGAGAAGGGCGGTGTCGGCAA ATCGCTCGTGTCGCGTCTGCTGGCGCAGTACCTCATCGACCACGAGGTCCCGTTCACCGGCTTCGATACCGACCGTTCGC ACGGCTCGCTGATGCGCTTCTATGCAGGCTACGCCTCGCCGGTGCTGGCCGATCGCTACGAGGCGCTGGATGCGATCGTC GAGGCGGCCATCGAGGCCCCGGGCCGCCGTGTGCTGGTCGACCTGGCAGCGCAGACCCATGATCCTCTGGTGAAGTGGAT GGATGAGTCGGGCGTGCTGGACCTGGCCGACATGTCCGGTGTCGCCATCCACTACTGGCACGTGATGGACTCCGGCAAGG ACTCGGTCGATCTGCTCAAGCGCCTGCTCGACCGCTTCGGCCGGCGCCTGCGCTACGTGCTGGTGCGCAACCAGCTCCGC GGCGACGACTTCAGCCAGCTCGAGAAGTCGGGCGAACAGGATCGCGCGCTGGCACTGGGCGCTCGTGTGATCACGCTCAA GCGCCTGCACGACTCGGTGGTGCAGAAGATCGACGCCAGCAACAGCAGCTTCTGGGCCGCGCGCAACTCGCCCGGCAGCG AAGGCCCGAGCCTGGGTCTGATGGAGCGCCAGCGTCTCAAGCTCTGGCTGAACCACGCCTTCAGCGAGATCGAGACGGCG GGGGTCTGA
Upstream 100 bases:
>100_bases CCAACTCGCTGCGTTGCACAATGTCCCGCACCGGGCGACGAATTCGACCTGGCATCCCGCCGGCCGACGTTCCGCCTTTC GCCATGGAGAGCTGAGCAGC
Downstream 100 bases:
>100_bases CCGCGGCGGCCCGCCGCAAGTCGGGCCTTCGTCACGCTCCGGGCGCGGCGCTATTGAAACGCCGTGAGCGACCCCTATAA TCTGTCGCTAGCACTCGCGC
Product: putative mobilization protein MobD
Products: NA
Alternate protein names: TraL Protein; Oxyanion-Translocating ATPase; Mobilization Protein MobD-Like Protein
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTQIPTLETATTSRIHMIGGEKGGVGKSLVSRLLAQYLIDHEVPFTGFDTDRSHGSLMRFYAGYASPVLADRYEALDAIV EAAIEAPGRRVLVDLAAQTHDPLVKWMDESGVLDLADMSGVAIHYWHVMDSGKDSVDLLKRLLDRFGRRLRYVLVRNQLR GDDFSQLEKSGEQDRALALGARVITLKRLHDSVVQKIDASNSSFWAARNSPGSEGPSLGLMERQRLKLWLNHAFSEIETA GV
Sequences:
>Translated_242_residues MTQIPTLETATTSRIHMIGGEKGGVGKSLVSRLLAQYLIDHEVPFTGFDTDRSHGSLMRFYAGYASPVLADRYEALDAIV EAAIEAPGRRVLVDLAAQTHDPLVKWMDESGVLDLADMSGVAIHYWHVMDSGKDSVDLLKRLLDRFGRRLRYVLVRNQLR GDDFSQLEKSGEQDRALALGARVITLKRLHDSVVQKIDASNSSFWAARNSPGSEGPSLGLMERQRLKLWLNHAFSEIETA GV >Mature_241_residues TQIPTLETATTSRIHMIGGEKGGVGKSLVSRLLAQYLIDHEVPFTGFDTDRSHGSLMRFYAGYASPVLADRYEALDAIVE AAIEAPGRRVLVDLAAQTHDPLVKWMDESGVLDLADMSGVAIHYWHVMDSGKDSVDLLKRLLDRFGRRLRYVLVRNQLRG DDFSQLEKSGEQDRALALGARVITLKRLHDSVVQKIDASNSSFWAARNSPGSEGPSLGLMERQRLKLWLNHAFSEIETAG V
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26860; Mature: 26729
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIPTLETATTSRIHMIGGEKGGVGKSLVSRLLAQYLIDHEVPFTGFDTDRSHGSLMRF CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH YAGYASPVLADRYEALDAIVEAAIEAPGRRVLVDLAAQTHDPLVKWMDESGVLDLADMSG HHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHCCCCCEEECCCCC VAIHYWHVMDSGKDSVDLLKRLLDRFGRRLRYVLVRNQLRGDDFSQLEKSGEQDRALALG CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHH ARVITLKRLHDSVVQKIDASNSSFWAARNSPGSEGPSLGLMERQRLKLWLNHAFSEIETA HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GV CC >Mature Secondary Structure TQIPTLETATTSRIHMIGGEKGGVGKSLVSRLLAQYLIDHEVPFTGFDTDRSHGSLMRF CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH YAGYASPVLADRYEALDAIVEAAIEAPGRRVLVDLAAQTHDPLVKWMDESGVLDLADMSG HHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHCCCCCEEECCCCC VAIHYWHVMDSGKDSVDLLKRLLDRFGRRLRYVLVRNQLRGDDFSQLEKSGEQDRALALG CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHH ARVITLKRLHDSVVQKIDASNSSFWAARNSPGSEGPSLGLMERQRLKLWLNHAFSEIETA HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA