Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265593
Identifier: 124265593
GI number: 124265593
Start: 436849
End: 438696
Strand: Direct
Name: 124265593
Synonym: Mpe_A0400
Alternate gene names: NA
Gene position: 436849-438696 (Clockwise)
Preceding gene: 124265592
Following gene: 124265594
Centisome position: 10.8
GC content: 66.83
Gene sequence:
>1848_bases GTGAAGAAGATTCGTACAGAAATCTCTCAGCGGCACGCCATCGCAGTAGCTGCGTTGGTCGCGCTGTGCGGGTCGGCCCA GGCGGCCGAATGGGCCTTCTCGGGCTTCATCCGACAGGAGTTGGCGGTCAAGACCACCGACGACCAGAACCTCACGACCC AGAACGGCAACTCCACCAACGGAGTGACCTACCCCAACAACAGCGTGCTGTTCCCAGGTACCACGCTGACCCGCCCGGGC GAGTACAAGAAAGACGCCGACATCAACTGGTTCGCCACCCGCGTGGACCTCAACTTCGACGGCAAGCTCACCGAGTCACT CAAGGCCACCATCAAGCTGCGCGGCATCGTCGACGAGACCCGCGCCGTCGAAGACGCCTACGGCACGCGCACCGTCGGCG GCGCCAGCACCGGCGTGGGCGACATCAACTCCGGCAGCAGCTTCCGCCAGGCCTTCGGCGGCACCGCTGGCGGCCCGCTG GCCTACGCCACCGACCGCGCGCTGATCGACCTGCCCGCCTTCTACCTCGACTACAACAACGGCCCGCTGTGGCTGCGCGC GGGCAACCAGCAGATCGCCTGGGGCGAGGCGCTGTTCTTCCGCGTCGCCGACCAGCCCAACGGCCTGGACCTGCGCGGCC ACCTGTTCGGCGTCGCCGCCGAAGAGTACTCCGACACCCGCCGCTCCGCGCTCGGCCTGCGCGCCAACTACCGCGTCAAC GAGAAGATGGATGTCGACGGCTTCGTGCAGCGCTTCGCGCCCACGCTGCTGCCCAACGGCGAGACCGGCTACAACCTCAT CCAGGACCAGTTCACCGTCGACCAGCGGCCCGGCTACGAGGACGTCAAGAACAAGTGGAACGTCGGCTTCCGCCTGAAGG GCGAGGCCGGCGGCTTCGGCTACCAGGCCTTCGCCATCAACCGCACCAACCCCGACGGCGTCTACAAGTGGTCGGCCGCC AAGGGAGAGAACGTCTTGCCGGGCACCGCGTTCGCGGTGCAGCCGACCGGCGTCTGGAGCGCCGAGGAATGGTTCCGCGG AGCCTCCAACTCGCGCCTGAACGGTATCGAGGGCGTGGCCACCTCCATGAACTTCATCACCGCGGCCGGCGACCCCTACG GCCTGGTCGGTCTGGCCACCGCCTGCGGTGCCGAACGCGCGGTCTACGGCGACTTCAAGCTCGGCAGCAAGGCGGCAGCG TCGTGCATCCTGGACACCTTCTTCACGCCGGGCGTGGCCGGGCCGCTGCGCGGCTGGCTGAGCCGCGAGTACAAGCGCGA GACGGTGTTCGGTGGCGGCATCAACCGGGTGTTCGAGGGCGAGCCCGACTCGCTGCTCGACCAGCTGATCGGGCGCTTCG AGTTCTCGTACACGCCCAACAAGCACTTCACCAACCCGACGCTGGGCGACTACATCGAGAAGGACGAGTACCAGTTCGCC TTCATCATGGAGAAGTACCACAAGTTCACCAGCGCCTTCCCGGCGACCTACTTCGTGGCGCAGTGGCTGCACAAGTCCAG GAGCGACCTGTTCGGGCGCTACCTGGGCGGCGTGGGCAACACCCCGGGCGACAACCCGAGCGGGCAGTCGGGCGGCTTCA ACGCGGTGGCGCTGGCGCTGCAGCAGCCGTCGCCGACGCTGGAGTACCGCTTCGACTTCGCGATCCTGACCGACCTCAAG GGCGGCTGGTACGCGCAGCCGGGCGTGAAGTGGAAGCCCACCAAGTCGATCCAGGCCGACCTCTACCTCAACGCCGTGTA CTCCCAGAACAAGGGCGAGTACCGCGACTTCGTCGACGGCCTGCAGCACAACAACGAAATCTTCGCCCGCGTGGCTTATC AGTTCTGA
Upstream 100 bases:
>100_bases GCGAGCGAAGGCACCGGCGGCAAGCGGCGCCTGGTGGCGGTGGGAGCCGGTGGAACGATCCTGGAACTCGATCTTTGACC TACAACGAGGAGACAACAGC
Downstream 100 bases:
>100_bases GTGGTCGTCATGGTGTATCGATCCTGACCCTGTCGCGCTCGCGGCAGGGCTCGATACCCATTTGCACCGGCTGCCTGTCC GGCAGCCGGTGTCTTTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MKKIRTEISQRHAIAVAALVALCGSAQAAEWAFSGFIRQELAVKTTDDQNLTTQNGNSTNGVTYPNNSVLFPGTTLTRPG EYKKDADINWFATRVDLNFDGKLTESLKATIKLRGIVDETRAVEDAYGTRTVGGASTGVGDINSGSSFRQAFGGTAGGPL AYATDRALIDLPAFYLDYNNGPLWLRAGNQQIAWGEALFFRVADQPNGLDLRGHLFGVAAEEYSDTRRSALGLRANYRVN EKMDVDGFVQRFAPTLLPNGETGYNLIQDQFTVDQRPGYEDVKNKWNVGFRLKGEAGGFGYQAFAINRTNPDGVYKWSAA KGENVLPGTAFAVQPTGVWSAEEWFRGASNSRLNGIEGVATSMNFITAAGDPYGLVGLATACGAERAVYGDFKLGSKAAA SCILDTFFTPGVAGPLRGWLSREYKRETVFGGGINRVFEGEPDSLLDQLIGRFEFSYTPNKHFTNPTLGDYIEKDEYQFA FIMEKYHKFTSAFPATYFVAQWLHKSRSDLFGRYLGGVGNTPGDNPSGQSGGFNAVALALQQPSPTLEYRFDFAILTDLK GGWYAQPGVKWKPTKSIQADLYLNAVYSQNKGEYRDFVDGLQHNNEIFARVAYQF
Sequences:
>Translated_615_residues MKKIRTEISQRHAIAVAALVALCGSAQAAEWAFSGFIRQELAVKTTDDQNLTTQNGNSTNGVTYPNNSVLFPGTTLTRPG EYKKDADINWFATRVDLNFDGKLTESLKATIKLRGIVDETRAVEDAYGTRTVGGASTGVGDINSGSSFRQAFGGTAGGPL AYATDRALIDLPAFYLDYNNGPLWLRAGNQQIAWGEALFFRVADQPNGLDLRGHLFGVAAEEYSDTRRSALGLRANYRVN EKMDVDGFVQRFAPTLLPNGETGYNLIQDQFTVDQRPGYEDVKNKWNVGFRLKGEAGGFGYQAFAINRTNPDGVYKWSAA KGENVLPGTAFAVQPTGVWSAEEWFRGASNSRLNGIEGVATSMNFITAAGDPYGLVGLATACGAERAVYGDFKLGSKAAA SCILDTFFTPGVAGPLRGWLSREYKRETVFGGGINRVFEGEPDSLLDQLIGRFEFSYTPNKHFTNPTLGDYIEKDEYQFA FIMEKYHKFTSAFPATYFVAQWLHKSRSDLFGRYLGGVGNTPGDNPSGQSGGFNAVALALQQPSPTLEYRFDFAILTDLK GGWYAQPGVKWKPTKSIQADLYLNAVYSQNKGEYRDFVDGLQHNNEIFARVAYQF >Mature_615_residues MKKIRTEISQRHAIAVAALVALCGSAQAAEWAFSGFIRQELAVKTTDDQNLTTQNGNSTNGVTYPNNSVLFPGTTLTRPG EYKKDADINWFATRVDLNFDGKLTESLKATIKLRGIVDETRAVEDAYGTRTVGGASTGVGDINSGSSFRQAFGGTAGGPL AYATDRALIDLPAFYLDYNNGPLWLRAGNQQIAWGEALFFRVADQPNGLDLRGHLFGVAAEEYSDTRRSALGLRANYRVN EKMDVDGFVQRFAPTLLPNGETGYNLIQDQFTVDQRPGYEDVKNKWNVGFRLKGEAGGFGYQAFAINRTNPDGVYKWSAA KGENVLPGTAFAVQPTGVWSAEEWFRGASNSRLNGIEGVATSMNFITAAGDPYGLVGLATACGAERAVYGDFKLGSKAAA SCILDTFFTPGVAGPLRGWLSREYKRETVFGGGINRVFEGEPDSLLDQLIGRFEFSYTPNKHFTNPTLGDYIEKDEYQFA FIMEKYHKFTSAFPATYFVAQWLHKSRSDLFGRYLGGVGNTPGDNPSGQSGGFNAVALALQQPSPTLEYRFDFAILTDLK GGWYAQPGVKWKPTKSIQADLYLNAVYSQNKGEYRDFVDGLQHNNEIFARVAYQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67473; Mature: 67473
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIRTEISQRHAIAVAALVALCGSAQAAEWAFSGFIRQELAVKTTDDQNLTTQNGNSTN CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCCCEECCCCCCC GVTYPNNSVLFPGTTLTRPGEYKKDADINWFATRVDLNFDGKLTESLKATIKLRGIVDET CEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHEEEEEEEEEHHHH RAVEDAYGTRTVGGASTGVGDINSGSSFRQAFGGTAGGPLAYATDRALIDLPAFYLDYNN HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCEEEECCEEEEECCC GPLWLRAGNQQIAWGEALFFRVADQPNGLDLRGHLFGVAAEEYSDTRRSALGLRANYRVN CEEEEEECCCEEEECEEEEEEECCCCCCCEECEEEEEEEHHHHHHHHHHHHCCEECCEEC EKMDVDGFVQRFAPTLLPNGETGYNLIQDQFTVDQRPGYEDVKNKWNVGFRLKGEAGGFG CCCCHHHHHHHHHHHHCCCCCCCCHHHHHCEECCCCCCHHHHHHCCCCCEEEECCCCCCC YQAFAINRTNPDGVYKWSAAKGENVLPGTAFAVQPTGVWSAEEWFRGASNSRLNGIEGVA EEEEEEECCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCHHHH TSMNFITAAGDPYGLVGLATACGAERAVYGDFKLGSKAAASCILDTFFTPGVAGPLRGWL HCCEEEEECCCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH SREYKRETVFGGGINRVFEGEPDSLLDQLIGRFEFSYTPNKHFTNPTLGDYIEKDEYQFA HHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHCCCCCHHH FIMEKYHKFTSAFPATYFVAQWLHKSRSDLFGRYLGGVGNTPGDNPSGQSGGFNAVALAL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE QQPSPTLEYRFDFAILTDLKGGWYAQPGVKWKPTKSIQADLYLNAVYSQNKGEYRDFVDG ECCCCCEEEEEEEEEEEECCCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHH LQHNNEIFARVAYQF HHCCCEEEEEEEECC >Mature Secondary Structure MKKIRTEISQRHAIAVAALVALCGSAQAAEWAFSGFIRQELAVKTTDDQNLTTQNGNSTN CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCCCEECCCCCCC GVTYPNNSVLFPGTTLTRPGEYKKDADINWFATRVDLNFDGKLTESLKATIKLRGIVDET CEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHEEEEEEEEEHHHH RAVEDAYGTRTVGGASTGVGDINSGSSFRQAFGGTAGGPLAYATDRALIDLPAFYLDYNN HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCEEEECCEEEEECCC GPLWLRAGNQQIAWGEALFFRVADQPNGLDLRGHLFGVAAEEYSDTRRSALGLRANYRVN CEEEEEECCCEEEECEEEEEEECCCCCCCEECEEEEEEEHHHHHHHHHHHHCCEECCEEC EKMDVDGFVQRFAPTLLPNGETGYNLIQDQFTVDQRPGYEDVKNKWNVGFRLKGEAGGFG CCCCHHHHHHHHHHHHCCCCCCCCHHHHHCEECCCCCCHHHHHHCCCCCEEEECCCCCCC YQAFAINRTNPDGVYKWSAAKGENVLPGTAFAVQPTGVWSAEEWFRGASNSRLNGIEGVA EEEEEEECCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCHHHH TSMNFITAAGDPYGLVGLATACGAERAVYGDFKLGSKAAASCILDTFFTPGVAGPLRGWL HCCEEEEECCCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH SREYKRETVFGGGINRVFEGEPDSLLDQLIGRFEFSYTPNKHFTNPTLGDYIEKDEYQFA HHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHCCCCCHHH FIMEKYHKFTSAFPATYFVAQWLHKSRSDLFGRYLGGVGNTPGDNPSGQSGGFNAVALAL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE QQPSPTLEYRFDFAILTDLKGGWYAQPGVKWKPTKSIQADLYLNAVYSQNKGEYRDFVDG ECCCCCEEEEEEEEEEEECCCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHH LQHNNEIFARVAYQF HHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA