Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is yeaZ [C]
Identifier: 124265494
GI number: 124265494
Start: 326915
End: 327646
Strand: Direct
Name: yeaZ [C]
Synonym: Mpe_A0301
Alternate gene names: 124265494
Gene position: 326915-327646 (Clockwise)
Preceding gene: 124265492
Following gene: 124265495
Centisome position: 8.08
GC content: 74.45
Gene sequence:
>732_bases ATGACGCCGCGCCTGCTGGTGCTCGATACCGCCACCGAAACGATGCACCTCGGCCTGTGCCGGGGCGAGCAGACCTGGGT GCGCGCGCTGCCCGGCGGCGCGCTCGCCTCGGCCAGTCTGCTGCCGGCCCTGATGGCGCTGCTGGCCGATGCCGGACTGG GCCTGCGCGAACTCGACGCCATCGGCTGCGGACGCGGTCCGGGCGCCTTCACTGGCGTGCGCGCGGCCTGCGCGGTGACA CAGGGACTGGCCTTCGGCGCGGACCGACCGGTGTTGATGCTCGATACCTTGATGGCGGTGGCCGAAGACGCCCACCATCA GGGCGCCGCCGACGATCTGTGGGTGGCGGTCGACGCCCGCATGGGCGAGACCTATGCCGCGCGCTACCGCCGCAGCGCAA CGGGCTGGACTGTGCTCGAAGCCCCGGCCCTGCATGCGCCGGCCGCGCTGGCCGCACGCATTGCCGGCGAGACGCCGCAG GTGCAGGTCGCCGGCAGCTCGCTGGTTGCGCATGCCGAGGCCTGGTCGGGCCTGCGCGGGGCCTGCTGGCCCGACAGTGC CCCGCGGGCGGCGGCCCTGCTGGTACTGGCCCGTGTGGCGTGGGCGCGCGGTGAACAGGTCGACGCTGATGGCGCATTGC CGCTCTACGTGCGCGACCGGGTGGCGCAGACCACTGCCGAGCGGATGGCGCAGCGCGACGTGCAGGCGGCGGGCAGCGGG GTGCCGTCGTGA
Upstream 100 bases:
>100_bases CTGGTCCGCGGACCACCGGAGTTGACGAGGTCAACGCGGCCGCGCCGCGCGTCGGCCCGTCGGTGCCCTCTCCTTTCGAT CGTTCCCGCGGAGCCCGCTC
Downstream 100 bases:
>100_bases ACGCCGTGCTGCAGCCGCCGCCGCGCAGCCTGAGCATGCTGACGGAGAACGACTTCGACGAGGTGATGGTGATCGAGCAG GCGATCTACGACTTTCCCTG
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTPRLLVLDTATETMHLGLCRGEQTWVRALPGGALASASLLPALMALLADAGLGLRELDAIGCGRGPGAFTGVRAACAVT QGLAFGADRPVLMLDTLMAVAEDAHHQGAADDLWVAVDARMGETYAARYRRSATGWTVLEAPALHAPAALAARIAGETPQ VQVAGSSLVAHAEAWSGLRGACWPDSAPRAAALLVLARVAWARGEQVDADGALPLYVRDRVAQTTAERMAQRDVQAAGSG VPS
Sequences:
>Translated_243_residues MTPRLLVLDTATETMHLGLCRGEQTWVRALPGGALASASLLPALMALLADAGLGLRELDAIGCGRGPGAFTGVRAACAVT QGLAFGADRPVLMLDTLMAVAEDAHHQGAADDLWVAVDARMGETYAARYRRSATGWTVLEAPALHAPAALAARIAGETPQ VQVAGSSLVAHAEAWSGLRGACWPDSAPRAAALLVLARVAWARGEQVDADGALPLYVRDRVAQTTAERMAQRDVQAAGSG VPS >Mature_242_residues TPRLLVLDTATETMHLGLCRGEQTWVRALPGGALASASLLPALMALLADAGLGLRELDAIGCGRGPGAFTGVRAACAVTQ GLAFGADRPVLMLDTLMAVAEDAHHQGAADDLWVAVDARMGETYAARYRRSATGWTVLEAPALHAPAALAARIAGETPQV QVAGSSLVAHAEAWSGLRGACWPDSAPRAAALLVLARVAWARGEQVDADGALPLYVRDRVAQTTAERMAQRDVQAAGSGV PS
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=246, Percent_Identity=31.7073170731707, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 25121; Mature: 24990
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRLLVLDTATETMHLGLCRGEQTWVRALPGGALASASLLPALMALLADAGLGLRELDA CCCCEEEEECCCCHHEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH IGCGRGPGAFTGVRAACAVTQGLAFGADRPVLMLDTLMAVAEDAHHQGAADDLWVAVDAR HCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC MGETYAARYRRSATGWTVLEAPALHAPAALAARIAGETPQVQVAGSSLVAHAEAWSGLRG CCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCC ACWPDSAPRAAALLVLARVAWARGEQVDADGALPLYVRDRVAQTTAERMAQRDVQAAGSG CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC VPS CCC >Mature Secondary Structure TPRLLVLDTATETMHLGLCRGEQTWVRALPGGALASASLLPALMALLADAGLGLRELDA CCCEEEEECCCCHHEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH IGCGRGPGAFTGVRAACAVTQGLAFGADRPVLMLDTLMAVAEDAHHQGAADDLWVAVDAR HCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC MGETYAARYRRSATGWTVLEAPALHAPAALAARIAGETPQVQVAGSSLVAHAEAWSGLRG CCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCC ACWPDSAPRAAALLVLARVAWARGEQVDADGALPLYVRDRVAQTTAERMAQRDVQAAGSG CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC VPS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]