Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265335
Identifier: 124265335
GI number: 124265335
Start: 148715
End: 149323
Strand: Direct
Name: 124265335
Synonym: Mpe_A0142
Alternate gene names: NA
Gene position: 148715-149323 (Clockwise)
Preceding gene: 124265334
Following gene: 124265336
Centisome position: 3.68
GC content: 75.7
Gene sequence:
>609_bases ATGCAGACCGTCATTGAATGCCGGCACCACGAGCCGCTGGCGCGCTGGGGCGCGGCGCTGCGGCGTCGCGCCGCGCCGCT CGGCGGCCTGGTGCGGCTGGGTGCTGCGGCGCTGCTCGTGGCCTGCGCGCTCGCGCCGCTGGCACGCGACGCGGCGCCGG CCGACGGCGCGTTGCGTGCCGTCGAATGGCCGCGGCAGTTCGACGGTCGCACGCTGCGCCCGCTGGCGCTGAGCCCGGTG GAGCAGCGTTTCGCCAACGCTTTCCCCGGCGCGATCGGCCGCTTCAGCGACGGCGAGCGGCTGCTGGTGCTGCGCGACGT GCAGCGCCCCACGCGCATGCTGCACCCGGCGGCCGATTGCTATCGCGGCCTCGGCTACAGCATCGCCGCCGCGCGCCTGG AGCGCGACGCGCAACAGCGCCTGTGGCGCTGCTTCGAGGCCGAGCGCGGTGCGCAGCGGCTGCGCGTGTGCGAGCGCATC GCGGATGCGGAAGGCCAGGCCTACACCGACACCTCGGCGTGGTTCTGGGCCGCGGCGCTGGGCCGCTCGACCGGCCCCTG GCAGGCGGTGACGACTGTGGCGGTGGTGGACTCGGGAGCCATGCGATGA
Upstream 100 bases:
>100_bases GGCGAGGCCGCGCACCAGGCGATCGGCCTGGGGGTCACGGCCGCGGTGTGCGCCGCCGTGCTGGTGTGGACCCCGCGTGA ACAGGAGAAGGAGCTGCGCC
Downstream 100 bases:
>100_bases AGAACAGCGGCCCACTCCGTTCCCCCGCACGCCGCCTCAGCCTCATCACCTTCGCCCTCCTCGCCACCCTGCTCGCGCTG ACGGCGGCACTCTTCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MQTVIECRHHEPLARWGAALRRRAAPLGGLVRLGAAALLVACALAPLARDAAPADGALRAVEWPRQFDGRTLRPLALSPV EQRFANAFPGAIGRFSDGERLLVLRDVQRPTRMLHPAADCYRGLGYSIAAARLERDAQQRLWRCFEAERGAQRLRVCERI ADAEGQAYTDTSAWFWAAALGRSTGPWQAVTTVAVVDSGAMR
Sequences:
>Translated_202_residues MQTVIECRHHEPLARWGAALRRRAAPLGGLVRLGAAALLVACALAPLARDAAPADGALRAVEWPRQFDGRTLRPLALSPV EQRFANAFPGAIGRFSDGERLLVLRDVQRPTRMLHPAADCYRGLGYSIAAARLERDAQQRLWRCFEAERGAQRLRVCERI ADAEGQAYTDTSAWFWAAALGRSTGPWQAVTTVAVVDSGAMR >Mature_202_residues MQTVIECRHHEPLARWGAALRRRAAPLGGLVRLGAAALLVACALAPLARDAAPADGALRAVEWPRQFDGRTLRPLALSPV EQRFANAFPGAIGRFSDGERLLVLRDVQRPTRMLHPAADCYRGLGYSIAAARLERDAQQRLWRCFEAERGAQRLRVCERI ADAEGQAYTDTSAWFWAAALGRSTGPWQAVTTVAVVDSGAMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22128; Mature: 22128
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTVIECRHHEPLARWGAALRRRAAPLGGLVRLGAAALLVACALAPLARDAAPADGALRA CCCHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH VEWPRQFDGRTLRPLALSPVEQRFANAFPGAIGRFSDGERLLVLRDVQRPTRMLHPAADC HCCCHHCCCCCCCCHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHH YRGLGYSIAAARLERDAQQRLWRCFEAERGAQRLRVCERIADAEGQAYTDTSAWFWAAAL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHH GRSTGPWQAVTTVAVVDSGAMR CCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MQTVIECRHHEPLARWGAALRRRAAPLGGLVRLGAAALLVACALAPLARDAAPADGALRA CCCHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH VEWPRQFDGRTLRPLALSPVEQRFANAFPGAIGRFSDGERLLVLRDVQRPTRMLHPAADC HCCCHHCCCCCCCCHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHH YRGLGYSIAAARLERDAQQRLWRCFEAERGAQRLRVCERIADAEGQAYTDTSAWFWAAAL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHH GRSTGPWQAVTTVAVVDSGAMR CCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA