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The map label for this gene is mdcF [H]

Identifier: 124265322

GI number: 124265322

Start: 132864

End: 133856

Strand: Direct

Name: mdcF [H]

Synonym: Mpe_A0129

Alternate gene names: 124265322

Gene position: 132864-133856 (Clockwise)

Preceding gene: 124265319

Following gene: 124265323

Centisome position: 3.29

GC content: 72.51

Gene sequence:

>993_bases
ATGCAAGCGATCCTGTCCGTCACGGTGCCGTTCTTCGCGCTCGTGCTGTGCGGCTACCTCGCGGCGCGCACGCGCGTGAT
GCCGGAGGCCGCGATCCCCGGCCTCAACGCCTTCGTGCTGTTCTTCGCCCTGCCCTGCATGCTGTTCCGCTTCGGCGCGG
GCACGCCGATCGGCAACCTGCTGAACCCGACGATGCTGGCGGTCTACACGCTCGCGGGCCTCGGCCTCGTGGCGCTGACC
GTCGTGCTCACTCTCGGTGCGCGCGTGCACCTCAAGGATGCGGCCTTCGGCGCGCTGGTGGCCGCTTTCCCGAACAGCGG
CTTCATGGGCATGCCGATGATGACGGCGCTGATCGGTGCAGCCGCGGCCGGCCCGGTGATGGTCACGCTGCTGGTCGACA
TGTTCATCGTCAGCTCGGTCTGCCTCGCGCTGGCGCAGATGCATGCGGCCTCGCACCTGCCGCTCGGCGCACGCCTGCGC
AACGCGCTGCGCGGGCCGATCGCCAACCCGCAGCCCTGGGCCATCGCGCTCGGGGCGCTGTTCTCTGCCGCGGGGCTGGT
GCTGCCGGGGCCGCTGGCGCGCATCGTCGAGCTGCTGGCCGCCGCCGCGACGCCGGTCGCGCTGTTCACCATCGGCGCCG
TGCTGTGGCGGGCCGGCGAGCACGCACGCCTGGACGCCGCCGCCAGCGACGGCGCGCGGCGTGCGTCCCTCGTCGCCGTG
TTGCCGCTCGCGCTGATCAAGCTGTGCGTGCACCCGGCGCTGCTGTTCGCGATCGGCAGTGCGGCCATCGCGGTGGGCGC
CGCGCTGACGCCTTTCAACCTGATGGTGCTGACGCTGACCGCCGCACTGCCGTCGGCCAGCGGCGTCTCGCTGCTCGCCG
AGCGGCACGGTGCCGACACCGGGCGGGTGGCCCGCGTGATCATGGCGTCGACCGTGCTCGCCTTCGTCAGTTTCTCGGCG
CTGGCGTGGTGGTTCGGCGTGCAGGGCGGCTGA

Upstream 100 bases:

>100_bases
AGACGACGGGACGGAGCCGTGGCGAACGGCGGGGCGCGCGATGATAGCCAAGCGCTGCCGGCCGAGGCCTCGGTGCGCGG
CCTGACATACTGCCGCCGCG

Downstream 100 bases:

>100_bases
GTTTGCGTGCGCCCTGAAGCGGTGCGCGGCCCGTGCGGCGCGCGATTTGTCGCGTTGGCGACAGCCTCGGGGGTGTGGTG
GCAGGTGTTGCGTGAATGCG

Product: malonate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MQAILSVTVPFFALVLCGYLAARTRVMPEAAIPGLNAFVLFFALPCMLFRFGAGTPIGNLLNPTMLAVYTLAGLGLVALT
VVLTLGARVHLKDAAFGALVAAFPNSGFMGMPMMTALIGAAAAGPVMVTLLVDMFIVSSVCLALAQMHAASHLPLGARLR
NALRGPIANPQPWAIALGALFSAAGLVLPGPLARIVELLAAAATPVALFTIGAVLWRAGEHARLDAAASDGARRASLVAV
LPLALIKLCVHPALLFAIGSAAIAVGAALTPFNLMVLTLTAALPSASGVSLLAERHGADTGRVARVIMASTVLAFVSFSA
LAWWFGVQGG

Sequences:

>Translated_330_residues
MQAILSVTVPFFALVLCGYLAARTRVMPEAAIPGLNAFVLFFALPCMLFRFGAGTPIGNLLNPTMLAVYTLAGLGLVALT
VVLTLGARVHLKDAAFGALVAAFPNSGFMGMPMMTALIGAAAAGPVMVTLLVDMFIVSSVCLALAQMHAASHLPLGARLR
NALRGPIANPQPWAIALGALFSAAGLVLPGPLARIVELLAAAATPVALFTIGAVLWRAGEHARLDAAASDGARRASLVAV
LPLALIKLCVHPALLFAIGSAAIAVGAALTPFNLMVLTLTAALPSASGVSLLAERHGADTGRVARVIMASTVLAFVSFSA
LAWWFGVQGG
>Mature_330_residues
MQAILSVTVPFFALVLCGYLAARTRVMPEAAIPGLNAFVLFFALPCMLFRFGAGTPIGNLLNPTMLAVYTLAGLGLVALT
VVLTLGARVHLKDAAFGALVAAFPNSGFMGMPMMTALIGAAAAGPVMVTLLVDMFIVSSVCLALAQMHAASHLPLGARLR
NALRGPIANPQPWAIALGALFSAAGLVLPGPLARIVELLAAAATPVALFTIGAVLWRAGEHARLDAAASDGARRASLVAV
LPLALIKLCVHPALLFAIGSAAIAVGAALTPFNLMVLTLTAALPSASGVSLLAERHGADTGRVARVIMASTVLAFVSFSA
LAWWFGVQGG

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 33691; Mature: 33691

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAILSVTVPFFALVLCGYLAARTRVMPEAAIPGLNAFVLFFALPCMLFRFGAGTPIGNL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
LNPTMLAVYTLAGLGLVALTVVLTLGARVHLKDAAFGALVAAFPNSGFMGMPMMTALIGA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AAAGPVMVTLLVDMFIVSSVCLALAQMHAASHLPLGARLRNALRGPIANPQPWAIALGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
FSAAGLVLPGPLARIVELLAAAATPVALFTIGAVLWRAGEHARLDAAASDGARRASLVAV
HHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHH
LPLALIKLCVHPALLFAIGSAAIAVGAALTPFNLMVLTLTAALPSASGVSLLAERHGADT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCH
GRVARVIMASTVLAFVSFSALAWWFGVQGG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQAILSVTVPFFALVLCGYLAARTRVMPEAAIPGLNAFVLFFALPCMLFRFGAGTPIGNL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
LNPTMLAVYTLAGLGLVALTVVLTLGARVHLKDAAFGALVAAFPNSGFMGMPMMTALIGA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AAAGPVMVTLLVDMFIVSSVCLALAQMHAASHLPLGARLRNALRGPIANPQPWAIALGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
FSAAGLVLPGPLARIVELLAAAATPVALFTIGAVLWRAGEHARLDAAASDGARRASLVAV
HHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHH
LPLALIKLCVHPALLFAIGSAAIAVGAALTPFNLMVLTLTAALPSASGVSLLAERHGADT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCH
GRVARVIMASTVLAFVSFSALAWWFGVQGG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10858449; 11481430 [H]