Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265311
Identifier: 124265311
GI number: 124265311
Start: 122293
End: 122673
Strand: Direct
Name: 124265311
Synonym: Mpe_A0118
Alternate gene names: NA
Gene position: 122293-122673 (Clockwise)
Preceding gene: 124265310
Following gene: 124265312
Centisome position: 3.02
GC content: 72.7
Gene sequence:
>381_bases ATGACGACGAGCGCGCGGGGCGGCAACGAGGACGACTGGCTGGTGGCCTGCCTGTGTGCGGAGTGGTGCGGCACCTGCCG CGACTACCGTGCGGTTTTCGAGGCGCTGGCGCGCGAGCAGCCGGCGCTGCGCTGCGTGTGGGTGGACATCGAGGACGACA GCGATGCGCTCGCGCCGCTCGACCTTGACATCGAGAACTTCCCGACCGTGCTCGTGGCGCGTGGCGCCGAGCTGCGTTTC TTCGGCACGCTGCTGCCGCATGCCACCACGCTGGCGCGCACGCTGGAAGCCGCGCGCGGCGCAGCGCTGGTCGCACTGCC GGCGGCGCAGGCCGAGGCGCTGGTGACGACGGTGCGCACGATCGGGCAGCCGGTGCGCTGA
Upstream 100 bases:
>100_bases TACCGGGCCCATCGGCTGCGGTGGGCGGTCTGAGGGGGCAGCGGCCCGACCCATTCCCCCACCGCCCCGCGCGCCGCAGC CGCACAGGCACACTGCCGGC
Downstream 100 bases:
>100_bases GCGCGGCCCGCCGCGCGGGCCCACATGCGGTTTGCGCATGTGGGCAGGCGAAGAGCTTCGTTGGTTGCAGAAGCGGTGAA GGCTACCTTCAGGTTTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioredoxin Domain-Containing Protein; Thioredoxin Domain Protein; Thioredoxin; Thioredoxin Protein; Thiol-Disulfide Isomerase And Thioredoxins; Thioredoxin Domain; Thiol-Disulfide Isomerase And Thioredoxins Family Protein
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MTTSARGGNEDDWLVACLCAEWCGTCRDYRAVFEALAREQPALRCVWVDIEDDSDALAPLDLDIENFPTVLVARGAELRF FGTLLPHATTLARTLEAARGAALVALPAAQAEALVTTVRTIGQPVR
Sequences:
>Translated_126_residues MTTSARGGNEDDWLVACLCAEWCGTCRDYRAVFEALAREQPALRCVWVDIEDDSDALAPLDLDIENFPTVLVARGAELRF FGTLLPHATTLARTLEAARGAALVALPAAQAEALVTTVRTIGQPVR >Mature_125_residues TTSARGGNEDDWLVACLCAEWCGTCRDYRAVFEALAREQPALRCVWVDIEDDSDALAPLDLDIENFPTVLVARGAELRFF GTLLPHATTLARTLEAARGAALVALPAAQAEALVTTVRTIGQPVR
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13615; Mature: 13483
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSARGGNEDDWLVACLCAEWCGTCRDYRAVFEALAREQPALRCVWVDIEDDSDALAPL CCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC DLDIENFPTVLVARGAELRFFGTLLPHATTLARTLEAARGAALVALPAAQAEALVTTVRT CCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHH IGQPVR CCCCCC >Mature Secondary Structure TTSARGGNEDDWLVACLCAEWCGTCRDYRAVFEALAREQPALRCVWVDIEDDSDALAPL CCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC DLDIENFPTVLVARGAELRFFGTLLPHATTLARTLEAARGAALVALPAAQAEALVTTVRT CCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHH IGQPVR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA