Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
---|---|
Accession | NC_008820 |
Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is pta
Identifier: 124022396
GI number: 124022396
Start: 641686
End: 642786
Strand: Direct
Name: pta
Synonym: P9303_06871
Alternate gene names: NA
Gene position: 641686-642786 (Clockwise)
Preceding gene: 124022395
Following gene: 124022397
Centisome position: 23.92
GC content: 53.22
Gene sequence:
>1101_bases ATGGGCAAGACCTTGCTGATTGGATCTTGTGAGCCATTCAGTGGTAAATCGGCATTGGTTCTTGGTCTCGCTCGCCAGTT GATAGCGGCGAATCAGCCAATTCGCTTTGGGAAGCCTCTGGCCACGAGTGTGGAATGGGATCCCGCAGTTGCCCCTCTGC CCGAACCTTTAATTGATGATGATGTTCGTTTTGTTGGTGCAACCCTGGGTTTGTCTGAGCATCAACTGATTCCCTCTTTG CATCTTCTGGCAAAAGCAACGGCTGATCACCGTTTGGCTATGTCTCAAATGGATGCTGGCAAAGGATTCGAGGACCTATG CAAGCAGCTCGATCTTCATACTCAGGGCCTCACCATTCTTGAAGCAGCGGGTAGCTTGCATGAAGGCCTTCTTTACGGTC TCAGTCTTGGTCAGCTGGCCCACGGCTTGGATGCCCGCGTGGTGCTGGTGCATCTCTGGCAGGACAGCCGCAGCGTCGAT GCTTTGTTAGCGGCGAAGGAACAGCTTGGAGATCATCTGCTGGGCATCGTTTTGAATGCTGTAAAACCAGATGAAATTGA TGATCTAGAAACCAATGTGGTGCCTGCCCTGGAGGCCCTTGGACTGGCGGTGTTCGGAGTGATGCCCCATTCGCCACTCT TGCGCAGCGTGACTGTGGGTGAGTTGGTTAGGCGCCTAGGAGCCCGGGTGATCTGTTGCTCTGAGCGACTTGAGCTTCTG GTTGAGACTCTCAGTATCGGCGCCATGAATGTGAATTCCGCCATGGAATTTTTCCGTCGTCGTCGCAACATGGCTGTGGT GACTGGTGCTGACCGCACTGATATTCAGTTGGCGGCCCTCGAGGCTTCGACTCAGTGCTTGATCCTCACCGGTGCAGGGC AACCTTTGCCGCAGTTGATTAGTAGGGCAGAAGAACTTGAGGTTCCTTTACTCAAGGTGGATCACGACACACTGTCTACC GTGGAAGTGATTGAGCAGGCCTTTGGTCATGTGCGACTGCATGAGGCCGTTAAAGCAACCTATTCCTTCCGATTGGTCGA AGAACACTGTGACTTGGACCGTTTGTTTGATGTTCTGGGGTTGCCTATGCAGGGTCGATGA
Upstream 100 bases:
>100_bases CCTGCCCAATCGATTCTGGAAGTGGCTGCTGTTGGGTTCTGAAGAGTCTGTCTGTGGGTGACGCCTAAATTGCTCAGCTA TAGGAACACGGAGTCCACTG
Downstream 100 bases:
>100_bases CCACTGCTAGCTTCGATCCATCGTCATGGGGATGTCCTTGAGTCAGTCTCTGGATCTCCCTGACCTTGATCGGGTCGATA CCCTTGCCCAAGAGCTGGCC
Product: phosphotransacetylase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MGKTLLIGSCEPFSGKSALVLGLARQLIAANQPIRFGKPLATSVEWDPAVAPLPEPLIDDDVRFVGATLGLSEHQLIPSL HLLAKATADHRLAMSQMDAGKGFEDLCKQLDLHTQGLTILEAAGSLHEGLLYGLSLGQLAHGLDARVVLVHLWQDSRSVD ALLAAKEQLGDHLLGIVLNAVKPDEIDDLETNVVPALEALGLAVFGVMPHSPLLRSVTVGELVRRLGARVICCSERLELL VETLSIGAMNVNSAMEFFRRRRNMAVVTGADRTDIQLAALEASTQCLILTGAGQPLPQLISRAEELEVPLLKVDHDTLST VEVIEQAFGHVRLHEAVKATYSFRLVEEHCDLDRLFDVLGLPMQGR
Sequences:
>Translated_366_residues MGKTLLIGSCEPFSGKSALVLGLARQLIAANQPIRFGKPLATSVEWDPAVAPLPEPLIDDDVRFVGATLGLSEHQLIPSL HLLAKATADHRLAMSQMDAGKGFEDLCKQLDLHTQGLTILEAAGSLHEGLLYGLSLGQLAHGLDARVVLVHLWQDSRSVD ALLAAKEQLGDHLLGIVLNAVKPDEIDDLETNVVPALEALGLAVFGVMPHSPLLRSVTVGELVRRLGARVICCSERLELL VETLSIGAMNVNSAMEFFRRRRNMAVVTGADRTDIQLAALEASTQCLILTGAGQPLPQLISRAEELEVPLLKVDHDTLST VEVIEQAFGHVRLHEAVKATYSFRLVEEHCDLDRLFDVLGLPMQGR >Mature_365_residues GKTLLIGSCEPFSGKSALVLGLARQLIAANQPIRFGKPLATSVEWDPAVAPLPEPLIDDDVRFVGATLGLSEHQLIPSLH LLAKATADHRLAMSQMDAGKGFEDLCKQLDLHTQGLTILEAAGSLHEGLLYGLSLGQLAHGLDARVVLVHLWQDSRSVDA LLAAKEQLGDHLLGIVLNAVKPDEIDDLETNVVPALEALGLAVFGVMPHSPLLRSVTVGELVRRLGARVICCSERLELLV ETLSIGAMNVNSAMEFFRRRRNMAVVTGADRTDIQLAALEASTQCLILTGAGQPLPQLISRAEELEVPLLKVDHDTLSTV EVIEQAFGHVRLHEAVKATYSFRLVEEHCDLDRLFDVLGLPMQGR
Specific function: Unknown
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.fulgidus AF1212 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010766 [H]
Pfam domain/function: PF01656 CbiA; PF07085 DRTGG [H]
EC number: NA
Molecular weight: Translated: 39608; Mature: 39477
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKTLLIGSCEPFSGKSALVLGLARQLIAANQPIRFGKPLATSVEWDPAVAPLPEPLIDD CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVRFVGATLGLSEHQLIPSLHLLAKATADHRLAMSQMDAGKGFEDLCKQLDLHTQGLTIL CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHH EAAGSLHEGLLYGLSLGQLAHGLDARVVLVHLWQDSRSVDALLAAKEQLGDHLLGIVLNA HHHCHHHHHHHHHCCHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC VKPDEIDDLETNVVPALEALGLAVFGVMPHSPLLRSVTVGELVRRLGARVICCSERLELL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHH VETLSIGAMNVNSAMEFFRRRRNMAVVTGADRTDIQLAALEASTQCLILTGAGQPLPQLI HHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCCHHHHH SRAEELEVPLLKVDHDTLSTVEVIEQAFGHVRLHEAVKATYSFRLVEEHCDLDRLFDVLG HHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC LPMQGR CCCCCC >Mature Secondary Structure GKTLLIGSCEPFSGKSALVLGLARQLIAANQPIRFGKPLATSVEWDPAVAPLPEPLIDD CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVRFVGATLGLSEHQLIPSLHLLAKATADHRLAMSQMDAGKGFEDLCKQLDLHTQGLTIL CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHH EAAGSLHEGLLYGLSLGQLAHGLDARVVLVHLWQDSRSVDALLAAKEQLGDHLLGIVLNA HHHCHHHHHHHHHCCHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC VKPDEIDDLETNVVPALEALGLAVFGVMPHSPLLRSVTVGELVRRLGARVICCSERLELL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHH VETLSIGAMNVNSAMEFFRRRRNMAVVTGADRTDIQLAALEASTQCLILTGAGQPLPQLI HHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCCHHHHH SRAEELEVPLLKVDHDTLSTVEVIEQAFGHVRLHEAVKATYSFRLVEEHCDLDRLFDVLG HHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC LPMQGR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]