Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022294
Identifier: 124022294
GI number: 124022294
Start: 557936
End: 558283
Strand: Direct
Name: 124022294
Synonym: P9303_05841
Alternate gene names: NA
Gene position: 557936-558283 (Clockwise)
Preceding gene: 124022293
Following gene: 124022295
Centisome position: 20.8
GC content: 54.02
Gene sequence:
>348_bases ATGTCGCTTCTAGGGCAGGATTCGCAGAGATGCCGCCTCTTGCTGCAGCTCCTGCTCTGTGGTTTTCTTCCACTACTAGG GATGATTCCTGTAAGAGCGACTCAGCTTCAAGGCCTTACGCCGCTAGCACTCGCATGCTTTCAATCTGGTCAGCTCAACG CATGCCAAGCCGCTTTACTGCGGGCGGAAGCCCTGCAGAGAAGTGCAGGAGCTCAGAGCAACTATCCCTGTCAGACCTTG CTGCTTGGCTTGCAAGCCGATGTGATCATGAGTCAACTTCGAGCTGGACGTGGTGATGATGCTTTGATCATGCTGGAGGA GGTCAGCAACAGTTGTCGAGGTTTGTGA
Upstream 100 bases:
>100_bases AAAGGCACTTTCTTGATTAGTGGCATGCAAATTACTTTTGAGCATTTGCGATAGACCCATTCATTTGCGTTGAAATAAGC ACCGTTCTTGTGAAGGAATC
Downstream 100 bases:
>100_bases TCTAAGAGAGCAGAACTAGTGATCTCTTGAATTGCTTTTAATCTTCTTTATTGTTGCCCCGTTAACCCTGACCGTCAGCG TAAATATTGTCTTAACCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSLLGQDSQRCRLLLQLLLCGFLPLLGMIPVRATQLQGLTPLALACFQSGQLNACQAALLRAEALQRSAGAQSNYPCQTL LLGLQADVIMSQLRAGRGDDALIMLEEVSNSCRGL
Sequences:
>Translated_115_residues MSLLGQDSQRCRLLLQLLLCGFLPLLGMIPVRATQLQGLTPLALACFQSGQLNACQAALLRAEALQRSAGAQSNYPCQTL LLGLQADVIMSQLRAGRGDDALIMLEEVSNSCRGL >Mature_114_residues SLLGQDSQRCRLLLQLLLCGFLPLLGMIPVRATQLQGLTPLALACFQSGQLNACQAALLRAEALQRSAGAQSNYPCQTLL LGLQADVIMSQLRAGRGDDALIMLEEVSNSCRGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12300; Mature: 12169
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLGQDSQRCRLLLQLLLCGFLPLLGMIPVRATQLQGLTPLALACFQSGQLNACQAALL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHCCCCCHHHHHHHH RAEALQRSAGAQSNYPCQTLLLGLQADVIMSQLRAGRGDDALIMLEEVSNSCRGL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCC >Mature Secondary Structure SLLGQDSQRCRLLLQLLLCGFLPLLGMIPVRATQLQGLTPLALACFQSGQLNACQAALL CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHCCCCCHHHHHHHH RAEALQRSAGAQSNYPCQTLLLGLQADVIMSQLRAGRGDDALIMLEEVSNSCRGL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA