Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is purC
Identifier: 124022258
GI number: 124022258
Start: 530835
End: 531563
Strand: Direct
Name: purC
Synonym: P9303_05481
Alternate gene names: 124022258
Gene position: 530835-531563 (Clockwise)
Preceding gene: 124022257
Following gene: 124022259
Centisome position: 19.79
GC content: 54.46
Gene sequence:
>729_bases ATGACGCCAGATCACGGCCCTCTGCTCTATGAGGGCAAGGCCAAAAGAGTATTCGCTGCGGATCAGCCCGATTGTGTGTT GGTGGAGTTCAAGAATGACGCCACGGCGTTTAATGCACTCAAACGGGCTGAACTCGAGGGCAAGGGGCGACTGAACTGTC AGATCTCGGCACGACTGTTCGAGATGCTTGAGCGAGAGGGTGTGCCCACCCACTACCTCGGCCTGGCCGCCGAAACCTGG ATGCTTGTTCAGCATGTTGATGTGATTCCCCTGGAGGTTGTGATTCGCAACGTGGCGACTGGATCGCTTTGTCAACAAAC GCCGATTGCGGCCGGTACTGAGCTTTCGCCCGCTTTGTTGGATCTCTATTACAAGGACGACAATTTGGGTGATCCCCTGC TGAGCGAATCAAGGCTGCAGCTGCTTGGATTGATCAGTTCGCAGCAGCGTTTAGAGATCGAACAGTTGGCACGTCGAGTG AATCAGCTGTTGCTGTCTTTTTTTGAGAGCTTGGACCTGTTGTTGGTGGACTTCAAGCTCGAACTTGGACTCAACGGTGC CGGCACTCTGCTGGTGGCTGATGAAATCAGTCCTGATACCTGCAGGCTTTGGGACCATCGAAATAGTGATCCCCAGGCCC GCATTTTGGATAAGGATCGCTTCCGCCAGGACCTTGGTGGAGTGATTGAAGCCTACGGGGAGATCCTCAAACGGGTCCAA GGGGTGTGA
Upstream 100 bases:
>100_bases TTCTAGAGCAGGAGCTGCGCTCGCCCCGTCAGCCTGGCGGCCATGCTGCTGTTGAAGCGCATCAAAGTGCGCCTCCTGTT TCAGTTCCATCAGAATTCAA
Downstream 100 bases:
>100_bases GCTAATCCCTTCAACTGCAGGTAATGTCAGCGCACATTTGGCGGCTTTGTAGCCGGATTCCTATCACCCATGGCCAGCTT CCTATCTAGCGGACCCTCGG
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTPDHGPLLYEGKAKRVFAADQPDCVLVEFKNDATAFNALKRAELEGKGRLNCQISARLFEMLEREGVPTHYLGLAAETW MLVQHVDVIPLEVVIRNVATGSLCQQTPIAAGTELSPALLDLYYKDDNLGDPLLSESRLQLLGLISSQQRLEIEQLARRV NQLLLSFFESLDLLLVDFKLELGLNGAGTLLVADEISPDTCRLWDHRNSDPQARILDKDRFRQDLGGVIEAYGEILKRVQ GV
Sequences:
>Translated_242_residues MTPDHGPLLYEGKAKRVFAADQPDCVLVEFKNDATAFNALKRAELEGKGRLNCQISARLFEMLEREGVPTHYLGLAAETW MLVQHVDVIPLEVVIRNVATGSLCQQTPIAAGTELSPALLDLYYKDDNLGDPLLSESRLQLLGLISSQQRLEIEQLARRV NQLLLSFFESLDLLLVDFKLELGLNGAGTLLVADEISPDTCRLWDHRNSDPQARILDKDRFRQDLGGVIEAYGEILKRVQ GV >Mature_241_residues TPDHGPLLYEGKAKRVFAADQPDCVLVEFKNDATAFNALKRAELEGKGRLNCQISARLFEMLEREGVPTHYLGLAAETWM LVQHVDVIPLEVVIRNVATGSLCQQTPIAAGTELSPALLDLYYKDDNLGDPLLSESRLQLLGLISSQQRLEIEQLARRVN QLLLSFFESLDLLLVDFKLELGLNGAGTLLVADEISPDTCRLWDHRNSDPQARILDKDRFRQDLGGVIEAYGEILKRVQG V
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family
Homologues:
Organism=Homo sapiens, GI119220557, Length=226, Percent_Identity=31.4159292035398, Blast_Score=110, Evalue=8e-25, Organism=Homo sapiens, GI5453539, Length=226, Percent_Identity=31.4159292035398, Blast_Score=110, Evalue=8e-25, Organism=Homo sapiens, GI119220559, Length=233, Percent_Identity=30.0429184549356, Blast_Score=101, Evalue=7e-22, Organism=Escherichia coli, GI1788820, Length=231, Percent_Identity=38.961038961039, Blast_Score=179, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17531275, Length=236, Percent_Identity=32.2033898305085, Blast_Score=120, Evalue=5e-28, Organism=Drosophila melanogaster, GI18860083, Length=244, Percent_Identity=28.6885245901639, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24583917, Length=249, Percent_Identity=27.710843373494, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): PUR7_PROM3 (A2C740)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016565.1 - ProteinModelPortal: A2C740 - SMR: A2C740 - STRING: A2C740 - GeneID: 4775922 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_05481 - eggNOG: COG0152 - HOGENOM: HBG306070 - OMA: YKDDALG - ProtClustDB: PRK09362 - HAMAP: MF_00137 - InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 - Gene3D: G3DSA:3.30.470.20 - PANTHER: PTHR11609 - TIGRFAMs: TIGR00081
Pfam domain/function: PF01259 SAICAR_synt
EC number: =6.3.2.6
Molecular weight: Translated: 26995; Mature: 26864
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS01057 SAICAR_SYNTHETASE_1; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDHGPLLYEGKAKRVFAADQPDCVLVEFKNDATAFNALKRAELEGKGRLNCQISARLF CCCCCCCEEECCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEHHHHHH EMLEREGVPTHYLGLAAETWMLVQHVDVIPLEVVIRNVATGSLCQQTPIAAGTELSPALL HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHH DLYYKDDNLGDPLLSESRLQLLGLISSQQRLEIEQLARRVNQLLLSFFESLDLLLVDFKL EEEECCCCCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEE ELGLNGAGTLLVADEISPDTCRLWDHRNSDPQARILDKDRFRQDLGGVIEAYGEILKRVQ EECCCCCCEEEEEECCCCCCEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHC GV CC >Mature Secondary Structure TPDHGPLLYEGKAKRVFAADQPDCVLVEFKNDATAFNALKRAELEGKGRLNCQISARLF CCCCCCEEECCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEHHHHHH EMLEREGVPTHYLGLAAETWMLVQHVDVIPLEVVIRNVATGSLCQQTPIAAGTELSPALL HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHH DLYYKDDNLGDPLLSESRLQLLGLISSQQRLEIEQLARRVNQLLLSFFESLDLLLVDFKL EEEECCCCCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEE ELGLNGAGTLLVADEISPDTCRLWDHRNSDPQARILDKDRFRQDLGGVIEAYGEILKRVQ EECCCCCCEEEEEECCCCCCEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHC GV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA