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The map label for this gene is ccdA

Identifier: 124022182

GI number: 124022182

Start: 471904

End: 472572

Strand: Reverse

Name: ccdA

Synonym: P9303_04721

Alternate gene names: NA

Gene position: 472572-471904 (Counterclockwise)

Preceding gene: 124022183

Following gene: 124022181

Centisome position: 17.62

GC content: 60.84

Gene sequence:

>669_bases
ATGCTCAGCCACGGGCTAAGCAATCAAGGTCCGCTCACCCTGGCCCTCGTTTTTGCTGCCGGCTTTCTAACAAGCCTAGG
CCCCTGCTCCCTTTCCCTACTACCCGTCACCCTGGCCTATCTGGCAGGTTTTGATAGCAATCAGGCCCCCTGGCGCCGCA
GCATCGCATTCTGTGGCGGCATTGTGGGTTCCCTGGTACTGCTTGGCAGCCTTAGTGGTCTGATCGGACGGATTTACGGC
CAGGTGCCTGGAGTGGTGCCCACCCTGGTAGCACTGCTGGCGGTAGTCATGGGACTGAATCTGCTAGGCCTCCTAAAACT
GCCCCTGCCTGCAGGACCAGATCCAGATCTTTGGCGGCAACGCGTTCCAGCTCCACTTGCCCCAGTGGCCGCCGGGTTGG
CCTTCGGCCTAGCCGCCTCCCCCTGCACGACACCTGTGCTGGCTGTACTACTGGGATGGATCGCCCAGAGAGGTCAACCT
TTGGTAGGAATCGTGCTGCTCACCTGCTTTGGCATTGGGCAGGTCCTACCACTGCTGCTAGCAGGAAGCGCAGCTGCCAT
CCTGCCGAAATTACTGGCACTGCGACCATTAGGCCGCTGGATCCCCCCCATGAGCGGAGCCGTTCTACTCACGACAGGCG
TTCTCACTCTGTTGGCCCGCTGGAGCTGA

Upstream 100 bases:

>100_bases
GTCGATAGGGTAAATACCGTAATTTGATCCGGCTGAGCCGGCTCTACCCATCCCTGCTCTGGACCTGGTTCTCTCAGATC
TAGCCCGCAACGGTGAGCAA

Downstream 100 bases:

>100_bases
ACCTATGGTCACCTTAAAACGCCTTCTTGCCTGGATCTCCGACCTGCGAATAGCCATAGGTTTGCTCTTCGTTATCGCAC
TCTCAAGTGCCCTAGGTACT

Product: c-type cytochrome biogenesis protein CcdA

Products: NA

Alternate protein names: Cytochrome C Biogenesis Protein; Cytochrome C Biogenesis Protein-Like; CytoChrome C Biogenesis Protein; C-Type Cytochrome Biogenesis Protein

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLSHGLSNQGPLTLALVFAAGFLTSLGPCSLSLLPVTLAYLAGFDSNQAPWRRSIAFCGGIVGSLVLLGSLSGLIGRIYG
QVPGVVPTLVALLAVVMGLNLLGLLKLPLPAGPDPDLWRQRVPAPLAPVAAGLAFGLAASPCTTPVLAVLLGWIAQRGQP
LVGIVLLTCFGIGQVLPLLLAGSAAAILPKLLALRPLGRWIPPMSGAVLLTTGVLTLLARWS

Sequences:

>Translated_222_residues
MLSHGLSNQGPLTLALVFAAGFLTSLGPCSLSLLPVTLAYLAGFDSNQAPWRRSIAFCGGIVGSLVLLGSLSGLIGRIYG
QVPGVVPTLVALLAVVMGLNLLGLLKLPLPAGPDPDLWRQRVPAPLAPVAAGLAFGLAASPCTTPVLAVLLGWIAQRGQP
LVGIVLLTCFGIGQVLPLLLAGSAAAILPKLLALRPLGRWIPPMSGAVLLTTGVLTLLARWS
>Mature_222_residues
MLSHGLSNQGPLTLALVFAAGFLTSLGPCSLSLLPVTLAYLAGFDSNQAPWRRSIAFCGGIVGSLVLLGSLSGLIGRIYG
QVPGVVPTLVALLAVVMGLNLLGLLKLPLPAGPDPDLWRQRVPAPLAPVAAGLAFGLAASPCTTPVLAVLLGWIAQRGQP
LVGIVLLTCFGIGQVLPLLLAGSAAAILPKLLALRPLGRWIPPMSGAVLLTTGVLTLLARWS

Specific function: Unknown

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22680; Mature: 22680

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSHGLSNQGPLTLALVFAAGFLTSLGPCSLSLLPVTLAYLAGFDSNQAPWRRSIAFCGG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
IVGSLVLLGSLSGLIGRIYGQVPGVVPTLVALLAVVMGLNLLGLLKLPLPAGPDPDLWRQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
RVPAPLAPVAAGLAFGLAASPCTTPVLAVLLGWIAQRGQPLVGIVLLTCFGIGQVLPLLL
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AGSAAAILPKLLALRPLGRWIPPMSGAVLLTTGVLTLLARWS
HCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSHGLSNQGPLTLALVFAAGFLTSLGPCSLSLLPVTLAYLAGFDSNQAPWRRSIAFCGG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
IVGSLVLLGSLSGLIGRIYGQVPGVVPTLVALLAVVMGLNLLGLLKLPLPAGPDPDLWRQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
RVPAPLAPVAAGLAFGLAASPCTTPVLAVLLGWIAQRGQPLVGIVLLTCFGIGQVLPLLL
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AGSAAAILPKLLALRPLGRWIPPMSGAVLLTTGVLTLLARWS
HCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA