| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025709
Identifier: 124025709
GI number: 124025709
Start: 923579
End: 924142
Strand: Direct
Name: 124025709
Synonym: NATL1_10021
Alternate gene names: NA
Gene position: 923579-924142 (Clockwise)
Preceding gene: 124025708
Following gene: 124025710
Centisome position: 49.53
GC content: 30.32
Gene sequence:
>564_bases ATGAATTTTTCGCCAGAGACATATTTATGGTTTAAATCATTTCATATTATCGGCGTAGTTGTTTGGTTTGCAGGTTTATT TTATTTAGTTAGATTATTTATTTACCATGTTGAAGTACAAACTCAGAAAGAGGAAATTAGGGAAGTTTTTAATAAGCAAT ATTCTTTAATGGAGAAAAGGTTAGCTAATATAATTACCACTCCAGGAATGGTATTGGCTGTTATAATGGCAACTGGTCTA TTGTATATGCAGCCTTCATATCTATCGCAAGTATGGATGCAAGTTAAATTATTATTTGTATTATTTCTACTTATATATCA TTTTTATTGTTATAGAATTATGAATCAATTAAATAATAATCAGTTTAATTTTACTGGTCAGCAACTACGAGCATTGAATG AGTTGCCAACACTACTATTGGTAGTTGTAGTAATGCTTGTTGTATTTAAAAACCAATTCCCAACAAGTGCTGCAAGTTGG TTGATATTTGGGTTAATACTTTTTATGGCTGCAAGTATACAATTTTATGCCAAATGGCGCAGGAACAAGAAACAACTTAC TTAG
Upstream 100 bases:
>100_bases ATAAATAATCTATTTTTAAATTATTAACTATTTAGCGACATCTAATCTTTATTAGAGTAATGTATAGAGTGATATGAACG TACCTAACATTTGATTTAAT
Downstream 100 bases:
>100_bases TTAATATGACTAATAAGGATTTTCTTTGCTTAAAAAATATAATCAAATCTGTTACTAAAGATAGTTGTCCAAATTCTATT AATTTTCATATGCATTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MNFSPETYLWFKSFHIIGVVVWFAGLFYLVRLFIYHVEVQTQKEEIREVFNKQYSLMEKRLANIITTPGMVLAVIMATGL LYMQPSYLSQVWMQVKLLFVLFLLIYHFYCYRIMNQLNNNQFNFTGQQLRALNELPTLLLVVVVMLVVFKNQFPTSAASW LIFGLILFMAASIQFYAKWRRNKKQLT
Sequences:
>Translated_187_residues MNFSPETYLWFKSFHIIGVVVWFAGLFYLVRLFIYHVEVQTQKEEIREVFNKQYSLMEKRLANIITTPGMVLAVIMATGL LYMQPSYLSQVWMQVKLLFVLFLLIYHFYCYRIMNQLNNNQFNFTGQQLRALNELPTLLLVVVVMLVVFKNQFPTSAASW LIFGLILFMAASIQFYAKWRRNKKQLT >Mature_187_residues MNFSPETYLWFKSFHIIGVVVWFAGLFYLVRLFIYHVEVQTQKEEIREVFNKQYSLMEKRLANIITTPGMVLAVIMATGL LYMQPSYLSQVWMQVKLLFVLFLLIYHFYCYRIMNQLNNNQFNFTGQQLRALNELPTLLLVVVVMLVVFKNQFPTSAASW LIFGLILFMAASIQFYAKWRRNKKQLT
Specific function: Unknown
COG id: COG1981
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0093 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014351 - InterPro: IPR005265 [H]
Pfam domain/function: PF03653 UPF0093 [H]
EC number: NA
Molecular weight: Translated: 22193; Mature: 22193
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFSPETYLWFKSFHIIGVVVWFAGLFYLVRLFIYHVEVQTQKEEIREVFNKQYSLMEKR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LANIITTPGMVLAVIMATGLLYMQPSYLSQVWMQVKLLFVLFLLIYHFYCYRIMNQLNNN HHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QFNFTGQQLRALNELPTLLLVVVVMLVVFKNQFPTSAASWLIFGLILFMAASIQFYAKWR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RNKKQLT HHHCCCC >Mature Secondary Structure MNFSPETYLWFKSFHIIGVVVWFAGLFYLVRLFIYHVEVQTQKEEIREVFNKQYSLMEKR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LANIITTPGMVLAVIMATGLLYMQPSYLSQVWMQVKLLFVLFLLIYHFYCYRIMNQLNNN HHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QFNFTGQQLRALNELPTLLLVVVVMLVVFKNQFPTSAASWLIFGLILFMAASIQFYAKWR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RNKKQLT HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]