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The map label for this gene is hcaE [H]

Identifier: 124025557

GI number: 124025557

Start: 780659

End: 781993

Strand: Reverse

Name: hcaE [H]

Synonym: NATL1_08501

Alternate gene names: 124025557

Gene position: 781993-780659 (Counterclockwise)

Preceding gene: 124025558

Following gene: 124025556

Centisome position: 41.94

GC content: 30.56

Gene sequence:

>1335_bases
ATGAACGAAGAAAATGGAAAAGACAATAAATCATTTGAATATGAGACTAATAACCTCATTAGATCTAATTTTAATGAGAA
AGAAAGTGTAAAAGAACTAGAGAATATTGCTCCCAAGCCATCTAATCAACTAACAAATGGACTATTAGGTTGGTATTCAG
TATCGAGTAGCGAGTCAATAAAGGAGGGTAAATTAAATCACTTCACAATTTACAATGAGCCGCTTGTTTTGTATCGTGAT
AGAGAAGGTATTGTTAGATGTGTAAAAGATGTCTGTCCTCATAGAGGAGCTTCATTTCTAGGCGGTGAAGTGATAAACGG
ACAACTTGTTTGCCCTTATCACGGTGCAAGGTTCTCATCTCAAGGAAGTTGCACAAATTTAGATAGAATAACCTGCCAGC
ATATTATTGATTCTAATTACGATAACTATGCAAAAAGCATAAAACTTTTTCAATATCCATGCGTAGAGAAAGAAGGATAT
ATTTATATTTATTATACAGGTACACCTCTAGCAAACATTGAAGACTTTCAGATAAAATCTTCAATCAATAGCCTTCTGCC
TGACTCCTATGGATTTCCATCTTTAGAATATGAATATGAAGAAGTTTATGTAGATTTCAAAGCAGACTGGGCAAGAATTA
TAGAAAATCATCTAGATATATTGCATGTATTCTGGATGCACGGAGACACAATCCCCGACAAGAACGTAAACAGAGAAACA
ATAACAAGCTTCAATCAAAAAATAAAAAGAGATAATAGGCAAATAGAAAGTATATATTCATATAAAACAAATGGGCAAGA
AGAGTTTATTAGAATAAAATTCGTACCTCCGGGAAGAATTTTTATATATAAAGGCTCACCTGAAAGTACAAGATATATTC
AAGTTCTAGATCATATTCCACTAGGAAATAATAAAGCAAGAGTAATTGTAAGGCATTATAGAAAATTCCTTAAAAATAAA
TTTTTTACAAACCTAGTTTTATTTAGCCATCTACAAAGAAGAACATTTTATAAGATTTTCACTGAAGATTATTTAGTCTT
AAAAACTCAAACATTTAATGATCAAATGGGCTACATACAAAAAGATAATGTAAAATTATTAGGAGAAGATAAAATGGTTC
AATATTACTGGGATTGGCTTCAAAATGCTTTAAATAAAGAAAAACCATGGGACTTACATCCAACCAATTCATTGACTAAT
TCAGTTCATGAGGATAGAGGAATGCAATATCCTCCAGAAAATCCTAATATGGCCATAAAGAATAATAGAAAGATAATTAT
AAAACTTTTAACTAGATTATTATTCCCAATTAGTTTTATTCTACTATTAATATAA

Upstream 100 bases:

>100_bases
CTGGAAGGCATTAGATGCTATTTTTTTGAGACTTTAAACATATCAGAAGAAAACTCTTTAAATGAGTCAAATTATTTCTC
ACTAAAAGAGCTGCTCGGCT

Downstream 100 bases:

>100_bases
TTAAAATAGATTATAAATTTAAATGATTATATAAATGAATGATGAGTCTCTTAAAGATAGAATAATATGGGCTAGTTTAA
AAAATATAAATGTATATATT

Product: Rieske iron-sulfur protein 2Fe-2S subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MNEENGKDNKSFEYETNNLIRSNFNEKESVKELENIAPKPSNQLTNGLLGWYSVSSSESIKEGKLNHFTIYNEPLVLYRD
REGIVRCVKDVCPHRGASFLGGEVINGQLVCPYHGARFSSQGSCTNLDRITCQHIIDSNYDNYAKSIKLFQYPCVEKEGY
IYIYYTGTPLANIEDFQIKSSINSLLPDSYGFPSLEYEYEEVYVDFKADWARIIENHLDILHVFWMHGDTIPDKNVNRET
ITSFNQKIKRDNRQIESIYSYKTNGQEEFIRIKFVPPGRIFIYKGSPESTRYIQVLDHIPLGNNKARVIVRHYRKFLKNK
FFTNLVLFSHLQRRTFYKIFTEDYLVLKTQTFNDQMGYIQKDNVKLLGEDKMVQYYWDWLQNALNKEKPWDLHPTNSLTN
SVHEDRGMQYPPENPNMAIKNNRKIIIKLLTRLLFPISFILLLI

Sequences:

>Translated_444_residues
MNEENGKDNKSFEYETNNLIRSNFNEKESVKELENIAPKPSNQLTNGLLGWYSVSSSESIKEGKLNHFTIYNEPLVLYRD
REGIVRCVKDVCPHRGASFLGGEVINGQLVCPYHGARFSSQGSCTNLDRITCQHIIDSNYDNYAKSIKLFQYPCVEKEGY
IYIYYTGTPLANIEDFQIKSSINSLLPDSYGFPSLEYEYEEVYVDFKADWARIIENHLDILHVFWMHGDTIPDKNVNRET
ITSFNQKIKRDNRQIESIYSYKTNGQEEFIRIKFVPPGRIFIYKGSPESTRYIQVLDHIPLGNNKARVIVRHYRKFLKNK
FFTNLVLFSHLQRRTFYKIFTEDYLVLKTQTFNDQMGYIQKDNVKLLGEDKMVQYYWDWLQNALNKEKPWDLHPTNSLTN
SVHEDRGMQYPPENPNMAIKNNRKIIIKLLTRLLFPISFILLLI
>Mature_444_residues
MNEENGKDNKSFEYETNNLIRSNFNEKESVKELENIAPKPSNQLTNGLLGWYSVSSSESIKEGKLNHFTIYNEPLVLYRD
REGIVRCVKDVCPHRGASFLGGEVINGQLVCPYHGARFSSQGSCTNLDRITCQHIIDSNYDNYAKSIKLFQYPCVEKEGY
IYIYYTGTPLANIEDFQIKSSINSLLPDSYGFPSLEYEYEEVYVDFKADWARIIENHLDILHVFWMHGDTIPDKNVNRET
ITSFNQKIKRDNRQIESIYSYKTNGQEEFIRIKFVPPGRIFIYKGSPESTRYIQVLDHIPLGNNKARVIVRHYRKFLKNK
FFTNLVLFSHLQRRTFYKIFTEDYLVLKTQTFNDQMGYIQKDNVKLLGEDKMVQYYWDWLQNALNKEKPWDLHPTNSLTN
SVHEDRGMQYPPENPNMAIKNNRKIIIKLLTRLLFPISFILLLI

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71983709, Length=189, Percent_Identity=28.042328042328, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI161085896, Length=138, Percent_Identity=28.2608695652174, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 52156; Mature: 52156

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: PS00570 RING_HYDROXYL_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEENGKDNKSFEYETNNLIRSNFNEKESVKELENIAPKPSNQLTNGLLGWYSVSSSESI
CCCCCCCCCCCEEECCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCCH
KEGKLNHFTIYNEPLVLYRDREGIVRCVKDVCPHRGASFLGGEVINGQLVCPYHGARFSS
HCCCCCEEEEECCCEEEEECCHHHHHHHHHHCCCCCCHHCCCEEECCEEECCCCCCCCCC
QGSCTNLDRITCQHIIDSNYDNYAKSIKLFQYPCVEKEGYIYIYYTGTPLANIEDFQIKS
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCCCHHHHHH
SINSLLPDSYGFPSLEYEYEEVYVDFKADWARIIENHLDILHVFWMHGDTIPDKNVNRET
HHHHHCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
ITSFNQKIKRDNRQIESIYSYKTNGQEEFIRIKFVPPGRIFIYKGSPESTRYIQVLDHIP
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEECCCCCCCCEEEEEECCC
LGNNKARVIVRHYRKFLKNKFFTNLVLFSHLQRRTFYKIFTEDYLVLKTQTFNDQMGYIQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEE
KDNVKLLGEDKMVQYYWDWLQNALNKEKPWDLHPTNSLTNSVHEDRGMQYPPENPNMAIK
CCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEE
NNRKIIIKLLTRLLFPISFILLLI
CCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNEENGKDNKSFEYETNNLIRSNFNEKESVKELENIAPKPSNQLTNGLLGWYSVSSSESI
CCCCCCCCCCCEEECCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCCH
KEGKLNHFTIYNEPLVLYRDREGIVRCVKDVCPHRGASFLGGEVINGQLVCPYHGARFSS
HCCCCCEEEEECCCEEEEECCHHHHHHHHHHCCCCCCHHCCCEEECCEEECCCCCCCCCC
QGSCTNLDRITCQHIIDSNYDNYAKSIKLFQYPCVEKEGYIYIYYTGTPLANIEDFQIKS
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCCCHHHHHH
SINSLLPDSYGFPSLEYEYEEVYVDFKADWARIIENHLDILHVFWMHGDTIPDKNVNRET
HHHHHCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
ITSFNQKIKRDNRQIESIYSYKTNGQEEFIRIKFVPPGRIFIYKGSPESTRYIQVLDHIP
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEECCCCCCCCEEEEEECCC
LGNNKARVIVRHYRKFLKNKFFTNLVLFSHLQRRTFYKIFTEDYLVLKTQTFNDQMGYIQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEE
KDNVKLLGEDKMVQYYWDWLQNALNKEKPWDLHPTNSLTNSVHEDRGMQYPPENPNMAIK
CCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEE
NNRKIIIKLLTRLLFPISFILLLI
CCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704279 [H]