BacMap

Definition	Prochlorococcus marinus str. NATL1A, complete genome.
Accession	NC_008819
Length	1,864,731

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The map label for this gene is modF [H]

Identifier: 124025556

GI number: 124025556

Start: 779812

End: 780624

Strand: Reverse

Name: modF [H]

Synonym: NATL1_08491

Alternate gene names: 124025556

Gene position: 780624-779812 (Counterclockwise)

Preceding gene: 124025557

Following gene: 124025554

Centisome position: 41.86

GC content: 26.08

Gene sequence:

>813_bases
ATGAATGATGAGTCTCTTAAAGATAGAATAATATGGGCTAGTTTAAAAAATATAAATGTATATATTGATAAAAACAAAAT
CCTATCAGATATAAATATAAATCTTCGTTATGGTGAAAACATACTGCTATTAGGACCAAATGGATCTGGTAAATCAACTT
TTCTAAAGTTATTAAATAGGTCGATTTATCCAATCACCTCTAATGATAGTTCATTTAAGTTGTTTAACAAAGAAAACATA
AATATTTGGGACTTAAGGAAGAAGATTGGATTTCTATTTAAAGAAATGGAGCAAAGGGTAACTAATGGAGTCAAGTTATA
TGATGTAATTAGTTCAGGATTTTCAGGAATATTTAATTCTAGATATTCAAATCTACTTTCTGAAAGAGAGAAAATTAAAA
TCAATAGTTTAATAAAAGAATGGGAGCTAAGTGCTATTATTTATAATGAGTTTCAATCATTATCTGATGGTCAAAAAAGA
AGAGGATTACTTGCAAGAGCTTTAGTTTATGAGCCTGATATACTAGTATTGGATGAGCCTTTTAGCAATTTAGATATAAA
ATCAAATTTCATCTTAAATCAAAACCTAAATAAATTAATTAAGCAATCAGTAAATATAATTTATGTCACACATAGTATTG
AATCTATTTTATCTAAAACCAATAGAGTTCTTCTAATAAAAGAAGGTAAAATAATAAATGATGGAAGTCCTTATGATTTA
ATTAATACAAAAACACTTAGCGATCTTTTTAATATATCAATCAAAGTAATAGAACAAGAAGGATACTGGAGAATGCTCCA
ATTCAGTAACTAA

Upstream 100 bases:

>100_bases
AAGATAATTATAAAACTTTTAACTAGATTATTATTCCCAATTAGTTTTATTCTACTATTAATATAATTAAAATAGATTAT
AAATTTAAATGATTATATAA

Downstream 100 bases:

>100_bases
ACAACCACAAGAATAAAGGCAACTATTAATATACATATAAAGAGAATATATTTATTATTAAATGAAAACTTACTGTAAAT
ACCTTTTTTATTATTTACTC

Product: ABC transporter ATPase

Products: NA

Alternate protein names: Sulfate-transporting ATPase [H]

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MNDESLKDRIIWASLKNINVYIDKNKILSDININLRYGENILLLGPNGSGKSTFLKLLNRSIYPITSNDSSFKLFNKENI
NIWDLRKKIGFLFKEMEQRVTNGVKLYDVISSGFSGIFNSRYSNLLSEREKIKINSLIKEWELSAIIYNEFQSLSDGQKR
RGLLARALVYEPDILVLDEPFSNLDIKSNFILNQNLNKLIKQSVNIIYVTHSIESILSKTNRVLLIKEGKIINDGSPYDL
INTKTLSDLFNISIKVIEQEGYWRMLQFSN

Sequences:

>Translated_270_residues
MNDESLKDRIIWASLKNINVYIDKNKILSDININLRYGENILLLGPNGSGKSTFLKLLNRSIYPITSNDSSFKLFNKENI
NIWDLRKKIGFLFKEMEQRVTNGVKLYDVISSGFSGIFNSRYSNLLSEREKIKINSLIKEWELSAIIYNEFQSLSDGQKR
RGLLARALVYEPDILVLDEPFSNLDIKSNFILNQNLNKLIKQSVNIIYVTHSIESILSKTNRVLLIKEGKIINDGSPYDL
INTKTLSDLFNISIKVIEQEGYWRMLQFSN
>Mature_270_residues
MNDESLKDRIIWASLKNINVYIDKNKILSDININLRYGENILLLGPNGSGKSTFLKLLNRSIYPITSNDSSFKLFNKENI
NIWDLRKKIGFLFKEMEQRVTNGVKLYDVISSGFSGIFNSRYSNLLSEREKIKINSLIKEWELSAIIYNEFQSLSDGQKR
RGLLARALVYEPDILVLDEPFSNLDIKSNFILNQNLNKLIKQSVNIIYVTHSIESILSKTNRVLLIKEGKIINDGSPYDL
INTKTLSDLFNISIKVIEQEGYWRMLQFSN

Specific function: Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system [H]

COG id: COG1119

COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI255708477, Length=228, Percent_Identity=30.2631578947368, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI9955966, Length=229, Percent_Identity=26.2008733624454, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI45243524, Length=229, Percent_Identity=26.2008733624454, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI9955968, Length=229, Percent_Identity=26.2008733624454, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI42741659, Length=231, Percent_Identity=26.8398268398268, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI9961250, Length=230, Percent_Identity=25.6521739130435, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI171184400, Length=220, Percent_Identity=27.7272727272727, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI9955963, Length=224, Percent_Identity=25.4464285714286, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI27881501, Length=213, Percent_Identity=27.2300469483568, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI30795238, Length=213, Percent_Identity=27.2300469483568, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI45446740, Length=229, Percent_Identity=27.0742358078603, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI47078218, Length=229, Percent_Identity=27.0742358078603, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI4505771, Length=226, Percent_Identity=25.6637168141593, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI9961252, Length=226, Percent_Identity=25.6637168141593, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI1788761, Length=225, Percent_Identity=29.3333333333333, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787029, Length=229, Percent_Identity=28.82096069869, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790467, Length=214, Percent_Identity=27.1028037383178, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789593, Length=241, Percent_Identity=24.0663900414938, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787089, Length=229, Percent_Identity=27.0742358078603, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1790739, Length=242, Percent_Identity=23.1404958677686, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI87081709, Length=232, Percent_Identity=26.2931034482759, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786975, Length=232, Percent_Identity=30.1724137931034, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787370, Length=232, Percent_Identity=25.4310344827586, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1790544, Length=233, Percent_Identity=24.0343347639485, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI87081782, Length=215, Percent_Identity=28.8372093023256, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1790162, Length=234, Percent_Identity=27.7777777777778, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786345, Length=253, Percent_Identity=23.3201581027668, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786253, Length=228, Percent_Identity=26.3157894736842, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1789032, Length=220, Percent_Identity=26.8181818181818, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786872, Length=237, Percent_Identity=28.6919831223629, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786803, Length=245, Percent_Identity=23.6734693877551, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788053, Length=211, Percent_Identity=25.1184834123223, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787712, Length=219, Percent_Identity=29.2237442922374, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788225, Length=238, Percent_Identity=24.7899159663866, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1788506, Length=223, Percent_Identity=24.2152466367713, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787164, Length=218, Percent_Identity=25.6880733944954, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI87082267, Length=224, Percent_Identity=23.6607142857143, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786319, Length=219, Percent_Identity=27.3972602739726, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789891, Length=214, Percent_Identity=26.1682242990654, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787547, Length=221, Percent_Identity=24.4343891402715, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787112, Length=224, Percent_Identity=26.7857142857143, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI87081834, Length=225, Percent_Identity=27.1111111111111, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789873, Length=222, Percent_Identity=25.6756756756757, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787143, Length=229, Percent_Identity=26.2008733624454, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789991, Length=225, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI48994943, Length=231, Percent_Identity=21.6450216450216, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787041, Length=216, Percent_Identity=26.3888888888889, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788210, Length=229, Percent_Identity=25.3275109170306, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789864, Length=223, Percent_Identity=22.4215246636771, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1789962, Length=216, Percent_Identity=23.1481481481481, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=237, Percent_Identity=29.957805907173, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17533971, Length=222, Percent_Identity=26.1261261261261, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17558664, Length=224, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17541710, Length=234, Percent_Identity=29.0598290598291, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=245, Percent_Identity=28.9795918367347, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI115534520, Length=254, Percent_Identity=23.6220472440945, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193209708, Length=230, Percent_Identity=27.8260869565217, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=216, Percent_Identity=31.4814814814815, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193208177, Length=226, Percent_Identity=28.3185840707965, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=224, Percent_Identity=25.4464285714286, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71984940, Length=232, Percent_Identity=27.1551724137931, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=221, Percent_Identity=24.8868778280543, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=227, Percent_Identity=25.9911894273128, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17567269, Length=219, Percent_Identity=26.9406392694064, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=217, Percent_Identity=29.4930875576037, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=217, Percent_Identity=29.4930875576037, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=243, Percent_Identity=24.6913580246914, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=229, Percent_Identity=28.3842794759825, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=240, Percent_Identity=24.5833333333333, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17551702, Length=215, Percent_Identity=23.2558139534884, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17551700, Length=215, Percent_Identity=23.2558139534884, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=220, Percent_Identity=30.9090909090909, Blast_Score=97, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6324985, Length=233, Percent_Identity=28.3261802575107, Blast_Score=82, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6324498, Length=256, Percent_Identity=28.125, Blast_Score=66, Evalue=6e-12,
Organism=Drosophila melanogaster, GI85726357, Length=232, Percent_Identity=29.7413793103448, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24659289, Length=230, Percent_Identity=28.695652173913, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24585091, Length=257, Percent_Identity=23.3463035019455, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI281361582, Length=242, Percent_Identity=25.2066115702479, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281363262, Length=223, Percent_Identity=25.1121076233184, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24653245, Length=223, Percent_Identity=25.1121076233184, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI85724864, Length=221, Percent_Identity=26.6968325791855, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24580555, Length=221, Percent_Identity=26.6968325791855, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI85816269, Length=221, Percent_Identity=26.6968325791855, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24580553, Length=221, Percent_Identity=26.6968325791855, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI28574259, Length=219, Percent_Identity=25.1141552511416, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI23397593, Length=223, Percent_Identity=26.0089686098655, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI45552437, Length=239, Percent_Identity=24.2677824267782, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24648279, Length=221, Percent_Identity=23.9819004524887, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014769
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR008995
- InterPro:   IPR005666 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.25 [H]

Molecular weight: Translated: 31182; Mature: 31182

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDESLKDRIIWASLKNINVYIDKNKILSDININLRYGENILLLGPNGSGKSTFLKLLNR
CCCHHHHHEEEEEEECCEEEEEECCCEEEEEEEEEEECCEEEEECCCCCCHHHHHHHHCC
SIYPITSNDSSFKLFNKENINIWDLRKKIGFLFKEMEQRVTNGVKLYDVISSGFSGIFNS
CCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHH
RYSNLLSEREKIKINSLIKEWELSAIIYNEFQSLSDGQKRRGLLARALVYEPDILVLDEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCEEEEECC
FSNLDIKSNFILNQNLNKLIKQSVNIIYVTHSIESILSKTNRVLLIKEGKIINDGSPYDL
CCCCCCCCEEEECCCHHHHHHCCCCEEEEEEHHHHHHHCCCCEEEEECCEEECCCCCCCC
INTKTLSDLFNISIKVIEQEGYWRMLQFSN
CCHHHHHHHHCEEEEEEECCCCEEEEEECC
>Mature Secondary Structure
MNDESLKDRIIWASLKNINVYIDKNKILSDININLRYGENILLLGPNGSGKSTFLKLLNR
CCCHHHHHEEEEEEECCEEEEEECCCEEEEEEEEEEECCEEEEECCCCCCHHHHHHHHCC
SIYPITSNDSSFKLFNKENINIWDLRKKIGFLFKEMEQRVTNGVKLYDVISSGFSGIFNS
CCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHH
RYSNLLSEREKIKINSLIKEWELSAIIYNEFQSLSDGQKRRGLLARALVYEPDILVLDEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCEEEEECC
FSNLDIKSNFILNQNLNKLIKQSVNIIYVTHSIESILSKTNRVLLIKEGKIINDGSPYDL
CCCCCCCCEEEECCCHHHHHHCCCCEEEEEEHHHHHHHCCCCEEEEECCEEECCCCCCCC
INTKTLSDLFNISIKVIEQEGYWRMLQFSN
CCHHHHHHHHCEEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]