| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025553
Identifier: 124025553
GI number: 124025553
Start: 776673
End: 777269
Strand: Reverse
Name: 124025553
Synonym: NATL1_08461
Alternate gene names: NA
Gene position: 777269-776673 (Counterclockwise)
Preceding gene: 124025554
Following gene: 124025552
Centisome position: 41.68
GC content: 43.89
Gene sequence:
>597_bases ATGAGCTTTAGAAGCTACGCAGAAACTCCTTCATCAGCTGTTCGAATGGCAACCGGGCAATCCGTGCTGATAGATCCCTC CTCAAGAAGAGGAGATACTTGCTTAGAGGTTTTAGAGGGCGTAGCACGTGTTTATTGCCCGTGTGAAGAAACAGAGGGTA TGACATTGGCTTTCTTGCAGTCTGGCGATCAATTAAGAACGGACCGGCTTTGCAGTGAAGGTGTATGCGTAGAAGCTTTA ACCCCTCTTTGTTTCGTAAGTGATGCTGAAACGTCAGTTGAATCAGGAGGGTTCGACGCTGTCAACGAGTGGACTCTTCA GCTACTTAGAATTAGACACTTAGGTAATGCTGAACAAAGACTTCAAGCTTTATTTGCTTTATTAGTTAACCGACTTGGAA GAAGATGCGGTGATTGGTGCCAATTACCATTCAGGCTTACTCATGAAAGAATTGGTGAGTTAATTGGATCAACAAGGGTT ACTTCTACTCGTTTAATTTCAAGACTGAGAACAGCCGATTTACTAAGAGCTCCATCAGGTGATCCTACTCTAAGTCTTTC TCCGGACTTCATTGAGTCATCACCATTAACCGCGTAA
Upstream 100 bases:
>100_bases TTGGCTAAAAATCTCAAGAGCTTGTTGCTATTGAGAATCGGTTGCAAAAAGCTTTGAATTTTGTGTAAATTAGATATCCA TCAAGCTTCATTCGGTTTTA
Downstream 100 bases:
>100_bases TAAATAATGAATCAAGATATATTTTCCTATTCCGAATCTATTGTTTTTTCACTCTGTAAAGAGATAGAGTTTATAAAGAT TAGATCCAAAAACATTAATA
Product: Crp family regulatory proteins
Products: NA
Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp Family Regulatory Protein; Regulatory Proteins Crp Family Protein; Crp Family Regulatory Proteins; Bacterial Regulatory Protein Crp Family
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSFRSYAETPSSAVRMATGQSVLIDPSSRRGDTCLEVLEGVARVYCPCEETEGMTLAFLQSGDQLRTDRLCSEGVCVEAL TPLCFVSDAETSVESGGFDAVNEWTLQLLRIRHLGNAEQRLQALFALLVNRLGRRCGDWCQLPFRLTHERIGELIGSTRV TSTRLISRLRTADLLRAPSGDPTLSLSPDFIESSPLTA
Sequences:
>Translated_198_residues MSFRSYAETPSSAVRMATGQSVLIDPSSRRGDTCLEVLEGVARVYCPCEETEGMTLAFLQSGDQLRTDRLCSEGVCVEAL TPLCFVSDAETSVESGGFDAVNEWTLQLLRIRHLGNAEQRLQALFALLVNRLGRRCGDWCQLPFRLTHERIGELIGSTRV TSTRLISRLRTADLLRAPSGDPTLSLSPDFIESSPLTA >Mature_197_residues SFRSYAETPSSAVRMATGQSVLIDPSSRRGDTCLEVLEGVARVYCPCEETEGMTLAFLQSGDQLRTDRLCSEGVCVEALT PLCFVSDAETSVESGGFDAVNEWTLQLLRIRHLGNAEQRLQALFALLVNRLGRRCGDWCQLPFRLTHERIGELIGSTRVT STRLISRLRTADLLRAPSGDPTLSLSPDFIESSPLTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21755; Mature: 21624
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRSYAETPSSAVRMATGQSVLIDPSSRRGDTCLEVLEGVARVYCPCEETEGMTLAFLQ CCCCCHHCCCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEC SGDQLRTDRLCSEGVCVEALTPLCFVSDAETSVESGGFDAVNEWTLQLLRIRHLGNAEQR CCCHHHHHHHHCCCCHHHHHCCHHEECCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHH LQALFALLVNRLGRRCGDWCQLPFRLTHERIGELIGSTRVTSTRLISRLRTADLLRAPSG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC DPTLSLSPDFIESSPLTA CCCEECCCCCCCCCCCCC >Mature Secondary Structure SFRSYAETPSSAVRMATGQSVLIDPSSRRGDTCLEVLEGVARVYCPCEETEGMTLAFLQ CCCCHHCCCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEC SGDQLRTDRLCSEGVCVEALTPLCFVSDAETSVESGGFDAVNEWTLQLLRIRHLGNAEQR CCCHHHHHHHHCCCCHHHHHCCHHEECCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHH LQALFALLVNRLGRRCGDWCQLPFRLTHERIGELIGSTRVTSTRLISRLRTADLLRAPSG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC DPTLSLSPDFIESSPLTA CCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA