| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025540
Identifier: 124025540
GI number: 124025540
Start: 765175
End: 766152
Strand: Reverse
Name: 124025540
Synonym: NATL1_08331
Alternate gene names: NA
Gene position: 766152-765175 (Counterclockwise)
Preceding gene: 124025541
Following gene: 124025539
Centisome position: 41.09
GC content: 31.7
Gene sequence:
>978_bases ATGGAAGTTATGATTCCTTCTTTTAATGTTCATCCTCAGCTAATTGGTATAGATAAAAATGAGATAATAAATATTCAGAC AAAAATCAAACCACTTCACACAGATGAAGAAGAACATCTAAATAATGACTATTGGACTGCATATATTTTAAAAGGGAAAA AATCGATATTTGTCGAAATTGAAATTGAATATGAAATTAAAAGTACAGCTATAGATAAGATTAAATGTTTGTGGCTAGAT ATAGAATGGGTTAATTACGGACCATTCGGTTCTTTCAAAAGATTCGATAGTTTTGTATTACCTAATTCTTTAGATATATC CAAAGTAAATTCTTCTAGTACCAATCTAGTAGATCCAATAAGAACTCATATTCTTGGCAGCTTAGATGATCCTATTAGAG TTTTAGAATCCTACATTCCACCAAATTACTTGCCTACAGATATTCTTACAATTGGAGAGTCACCACTAGCCGTAATGCAA GGAAGATACATAGATTATAGGAACGTAAAATCAAATCTAATATCAAGGATACTTTGCAAAGGATTTCACCCTACTAGTAG TTTAGCTACAGCTTCCGGAATGCAAACACTAATAAATATTTCTGGTCCAACACGCGTAATAATTTCATGGTTAATTGGAG GAATATTAAAATTATTTGGTGTTAAGGGTATGTTTTATCGTTTAGCTGGTGAACAAGCAAGATTGATTGATGACATCACT GGTACAACACCGCCCTATGACAAAAGTATAGTTTTAGGGCCTAAAGATACTAAAACTTTTTGTATTAATGCCGCAAAAAA ACTAAACGTTAATGTTGCTGTTGTAGATGTAAATGATTTAGGAAGAGTTAAAATTCTATCAACAAGTGATGTTAATAATG CTGAAATAATTAAAAAATCATTGACATCAAATCCAGCAGGTAATGCTAACCAACAAACGCCCCTAGTACTCATCAGATCA GATGAAACAAGTAAATAG
Upstream 100 bases:
>100_bases TTCGCCATTAGTTCTGAAACCCAAAGAATTTAAAAAAATCATATTCAATTCTATGCACAAATATATTACTCGTGTTGAAA TTAAAAATTCAAAGAAAAGA
Downstream 100 bases:
>100_bases TCACATGAAAGTTAAAAATATAATAAAATAATTAAATGAAAAATGATGACTCATTATCTTCAGATTTAATAATTGAGCCA CTTAAGCTCAAGCATTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MEVMIPSFNVHPQLIGIDKNEIINIQTKIKPLHTDEEEHLNNDYWTAYILKGKKSIFVEIEIEYEIKSTAIDKIKCLWLD IEWVNYGPFGSFKRFDSFVLPNSLDISKVNSSSTNLVDPIRTHILGSLDDPIRVLESYIPPNYLPTDILTIGESPLAVMQ GRYIDYRNVKSNLISRILCKGFHPTSSLATASGMQTLINISGPTRVIISWLIGGILKLFGVKGMFYRLAGEQARLIDDIT GTTPPYDKSIVLGPKDTKTFCINAAKKLNVNVAVVDVNDLGRVKILSTSDVNNAEIIKKSLTSNPAGNANQQTPLVLIRS DETSK
Sequences:
>Translated_325_residues MEVMIPSFNVHPQLIGIDKNEIINIQTKIKPLHTDEEEHLNNDYWTAYILKGKKSIFVEIEIEYEIKSTAIDKIKCLWLD IEWVNYGPFGSFKRFDSFVLPNSLDISKVNSSSTNLVDPIRTHILGSLDDPIRVLESYIPPNYLPTDILTIGESPLAVMQ GRYIDYRNVKSNLISRILCKGFHPTSSLATASGMQTLINISGPTRVIISWLIGGILKLFGVKGMFYRLAGEQARLIDDIT GTTPPYDKSIVLGPKDTKTFCINAAKKLNVNVAVVDVNDLGRVKILSTSDVNNAEIIKKSLTSNPAGNANQQTPLVLIRS DETSK >Mature_325_residues MEVMIPSFNVHPQLIGIDKNEIINIQTKIKPLHTDEEEHLNNDYWTAYILKGKKSIFVEIEIEYEIKSTAIDKIKCLWLD IEWVNYGPFGSFKRFDSFVLPNSLDISKVNSSSTNLVDPIRTHILGSLDDPIRVLESYIPPNYLPTDILTIGESPLAVMQ GRYIDYRNVKSNLISRILCKGFHPTSSLATASGMQTLINISGPTRVIISWLIGGILKLFGVKGMFYRLAGEQARLIDDIT GTTPPYDKSIVLGPKDTKTFCINAAKKLNVNVAVVDVNDLGRVKILSTSDVNNAEIIKKSLTSNPAGNANQQTPLVLIRS DETSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36191; Mature: 36191
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVMIPSFNVHPQLIGIDKNEIINIQTKIKPLHTDEEEHLNNDYWTAYILKGKKSIFVEI CEEECCCCCCCCEEEECCCCCEEEEEEEEECCCCCHHHHCCCCEEEEEEEECCCEEEEEE EIEYEIKSTAIDKIKCLWLDIEWVNYGPFGSFKRFDSFVLPNSLDISKVNSSSTNLVDPI EEEEEECCCCCCEEEEEEEEEEEECCCCCCCHHHHCCCCCCCCCCCEECCCCCCCCHHHH RTHILGSLDDPIRVLESYIPPNYLPTDILTIGESPLAVMQGRYIDYRNVKSNLISRILCK HHHHCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHC GFHPTSSLATASGMQTLINISGPTRVIISWLIGGILKLFGVKGMFYRLAGEQARLIDDIT CCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHC GTTPPYDKSIVLGPKDTKTFCINAAKKLNVNVAVVDVNDLGRVKILSTSDVNNAEIIKKS CCCCCCCCEEEECCCCCCEEEEECCEEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHH LTSNPAGNANQQTPLVLIRSDETSK HCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MEVMIPSFNVHPQLIGIDKNEIINIQTKIKPLHTDEEEHLNNDYWTAYILKGKKSIFVEI CEEECCCCCCCCEEEECCCCCEEEEEEEEECCCCCHHHHCCCCEEEEEEEECCCEEEEEE EIEYEIKSTAIDKIKCLWLDIEWVNYGPFGSFKRFDSFVLPNSLDISKVNSSSTNLVDPI EEEEEECCCCCCEEEEEEEEEEEECCCCCCCHHHHCCCCCCCCCCCEECCCCCCCCHHHH RTHILGSLDDPIRVLESYIPPNYLPTDILTIGESPLAVMQGRYIDYRNVKSNLISRILCK HHHHCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHC GFHPTSSLATASGMQTLINISGPTRVIISWLIGGILKLFGVKGMFYRLAGEQARLIDDIT CCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHC GTTPPYDKSIVLGPKDTKTFCINAAKKLNVNVAVVDVNDLGRVKILSTSDVNNAEIIKKS CCCCCCCCEEEECCCCCCEEEEECCEEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHH LTSNPAGNANQQTPLVLIRSDETSK HCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA