| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025539
Identifier: 124025539
GI number: 124025539
Start: 764102
End: 765073
Strand: Reverse
Name: 124025539
Synonym: NATL1_08321
Alternate gene names: NA
Gene position: 765073-764102 (Counterclockwise)
Preceding gene: 124025540
Following gene: 124025538
Centisome position: 41.03
GC content: 27.37
Gene sequence:
>972_bases ATGCTTAGAGCTGATAATAATTCAAAATACCTTGGTATATTTCAAATTCTATTATGCAAAAAATGGTTTTCTTCATTAGA GTCCAGCTTAACTAATTTAATTCCTACTCGGAACTCAACATGTTTAGTAGCAGTAGAAAGATATAATATAATTGCATACA TTTTAGCGACTCCAATTAATCGGAGAGGTACTTGTTGGTGTATATCAGAGCCATACTTTATAAGAGAATCAATATCCTTC AGTCGTTATAACTTATTACAGAATTTATTAAGAAAAGTTCTTTATAAAAGCAATATTAATACTCAAAGTTTTTTAATATC TATAAAAACAAATGATAATCAAAATTTATCTGTTATTAGACAATCTGGTTTTCAACCGCTAAGAATAATAAAATATTGGA ATAGAAAAGAAGATATTAAATATAGAAAAAAAGAGTATAAAGATAATTTCACCTGGGAAAAACTAAATGAAGAAAATAGT CAACAAATATGGAGACTTGAACAAGCTAAAGAGTCAATTAACTTTAGGTCGATTTTTGATAGGCAGTGGCATGATATTTA TGAAAAAAGAAATACATTAACTGGTGTAATTAAATCAAAAGAAAATAATATTATCGCTGGGTTAATTCCATCTGTTTGCC CCCAAAATAATTATTCATTAGAATTAATAAGAGGATTGGCTTGGGATGAAAGACTAAATCAATCTATTCCAAATAGAATT AATAATATGAAAGCTGGGAAAAGTAATTGTTATATAGAAACAACTAGTGAAGACAATAAATTGAATGACATTTTACATAA AAGTGACTGGGAAATTTCAGAGGAGAGAGTTCTTCTAGGAAGAAGTGTTTGGAAAAGACAAAATGGATATAAATTAAAAT CTATCGAAACTGAACTATTAACTAATCTTGTAGGCAATTTACAACAACAACCAGAATTACCTTCAACTATTCATATTGAA AATAACAAATGA
Upstream 100 bases:
>100_bases CACATGAAAGTTAAAAATATAATAAAATAATTAAATGAAAAATGATGACTCATTATCTTCAGATTTAATAATTGAGCCAC TTAAGCTCAAGCATTTATCA
Downstream 100 bases:
>100_bases TTCAGCCAAAACCCTGTTCAGTTTTGAGTCTTGATATTGGAGATAAAAGGATTGGTATTGCAGGTTGTGATCCACTTGGA ATATCAATAACTCATCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MLRADNNSKYLGIFQILLCKKWFSSLESSLTNLIPTRNSTCLVAVERYNIIAYILATPINRRGTCWCISEPYFIRESISF SRYNLLQNLLRKVLYKSNINTQSFLISIKTNDNQNLSVIRQSGFQPLRIIKYWNRKEDIKYRKKEYKDNFTWEKLNEENS QQIWRLEQAKESINFRSIFDRQWHDIYEKRNTLTGVIKSKENNIIAGLIPSVCPQNNYSLELIRGLAWDERLNQSIPNRI NNMKAGKSNCYIETTSEDNKLNDILHKSDWEISEERVLLGRSVWKRQNGYKLKSIETELLTNLVGNLQQQPELPSTIHIE NNK
Sequences:
>Translated_323_residues MLRADNNSKYLGIFQILLCKKWFSSLESSLTNLIPTRNSTCLVAVERYNIIAYILATPINRRGTCWCISEPYFIRESISF SRYNLLQNLLRKVLYKSNINTQSFLISIKTNDNQNLSVIRQSGFQPLRIIKYWNRKEDIKYRKKEYKDNFTWEKLNEENS QQIWRLEQAKESINFRSIFDRQWHDIYEKRNTLTGVIKSKENNIIAGLIPSVCPQNNYSLELIRGLAWDERLNQSIPNRI NNMKAGKSNCYIETTSEDNKLNDILHKSDWEISEERVLLGRSVWKRQNGYKLKSIETELLTNLVGNLQQQPELPSTIHIE NNK >Mature_323_residues MLRADNNSKYLGIFQILLCKKWFSSLESSLTNLIPTRNSTCLVAVERYNIIAYILATPINRRGTCWCISEPYFIRESISF SRYNLLQNLLRKVLYKSNINTQSFLISIKTNDNQNLSVIRQSGFQPLRIIKYWNRKEDIKYRKKEYKDNFTWEKLNEENS QQIWRLEQAKESINFRSIFDRQWHDIYEKRNTLTGVIKSKENNIIAGLIPSVCPQNNYSLELIRGLAWDERLNQSIPNRI NNMKAGKSNCYIETTSEDNKLNDILHKSDWEISEERVLLGRSVWKRQNGYKLKSIETELLTNLVGNLQQQPELPSTIHIE NNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38122; Mature: 38122
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRADNNSKYLGIFQILLCKKWFSSLESSLTNLIPTRNSTCLVAVERYNIIAYILATPIN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCEEEEEEECCCC RRGTCWCISEPYFIRESISFSRYNLLQNLLRKVLYKSNINTQSFLISIKTNDNQNLSVIR CCCCEEEECCCEEEHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHH QSGFQPLRIIKYWNRKEDIKYRKKEYKDNFTWEKLNEENSQQIWRLEQAKESINFRSIFD HCCCCCEEHHHHHCCCHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHH RQWHDIYEKRNTLTGVIKSKENNIIAGLIPSVCPQNNYSLELIRGLAWDERLNQSIPNRI HHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NNMKAGKSNCYIETTSEDNKLNDILHKSDWEISEERVLLGRSVWKRQNGYKLKSIETELL HCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHH TNLVGNLQQQPELPSTIHIENNK HHHHHHHHCCCCCCCEEEECCCC >Mature Secondary Structure MLRADNNSKYLGIFQILLCKKWFSSLESSLTNLIPTRNSTCLVAVERYNIIAYILATPIN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCEEEEEEECCCC RRGTCWCISEPYFIRESISFSRYNLLQNLLRKVLYKSNINTQSFLISIKTNDNQNLSVIR CCCCEEEECCCEEEHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHH QSGFQPLRIIKYWNRKEDIKYRKKEYKDNFTWEKLNEENSQQIWRLEQAKESINFRSIFD HCCCCCEEHHHHHCCCHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHH RQWHDIYEKRNTLTGVIKSKENNIIAGLIPSVCPQNNYSLELIRGLAWDERLNQSIPNRI HHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NNMKAGKSNCYIETTSEDNKLNDILHKSDWEISEERVLLGRSVWKRQNGYKLKSIETELL HCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHH TNLVGNLQQQPELPSTIHIENNK HHHHHHHHCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA