| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is ytfP [H]
Identifier: 124025469
GI number: 124025469
Start: 696437
End: 697660
Strand: Direct
Name: ytfP [H]
Synonym: NATL1_07621
Alternate gene names: 124025469
Gene position: 696437-697660 (Clockwise)
Preceding gene: 124025464
Following gene: 124025470
Centisome position: 37.35
GC content: 33.25
Gene sequence:
>1224_bases ATGATTTCAGATCTTGTCATTATTGGAGGGGGTGCCTCTGGCTTTATGGCAGCAATCACCGCGATTACTAATGGACTTAG ATCAGTTGTGATTCTAGAAGGTGCCTCAAAAGTACTTGAAAAAGTTAGAATTAGTGGTGGTGGTAGATGTAATTTAACCA ACTCATGTTTCGAGATTTCTGATTTAGTAAACAATTATCCAAGAGGTGAAAAGCAACTATTAGGATTGTTTAATAGATTT TCTACAACTGAAGCTTTTGATTGGTTTCAGGAGAAAGGACTTAGTCTTAAAGTAGAGAAAGATGGCAGAGTATTTCCTTG CTCTGATTCTTCTGAAGAAGTTATAAGTTGTTTGACTAATGTTGCGAAAAACTCAGGTGTAAAGGTATTAACTAATTCTT ATGTAAAGCAAATAAGTAAAATAGAAGGTGGCTTTAACTTATTAGTCAAAGGAGACAATTCCTTTAAAGCTAAGAATATT TTAATTTGTACTGGTGGTCATTCTAGTGGACGTAGATTAGCAATGAGTCTAGGGCACTCTATTATTCATCCTGTGCCCTC TCTTTTTTCTTTTTCTACTGTAGATAGCTCATTAAAAGATTGCTCAGGTATTACTTTAGATGTTCAAGTCAAACTCAATG TTAACAATAAAAAATATTTTGAAAAAGGTCCTATCTTGATAACTCATAAAGGCTTTAGCGGCCCTGTCATCCTTAGACTA TCTGCATTTAGTGCTAGAAATCTATACGATAATAAATACAAAGCTGAATTAAGAATAAATTGGCTTTGTATGAATGAGAA TGAAGCCAGATTGAAAATTGATTTATATAAATTAGAAAATGGTAAGAAATTAGTGTTCAATTATAAACCTTTCGATAAAC TTCCACGAAGCTTATGGAAATCTTTTCTCTTAAGCCTAAATATTGACTCACAATTGAAATGGGCTGAGCTATCTAAAACC AAAAAAGAGTCTTTAATCAAATATTTAATAATGAAAACCTATCTTATTAAGGGTCGTGGTCCTTTTGGTGAGGAATTTGT AACTGCTGGAGGAGTATCACTTAAGGAAATTAATTTTAAAACTATGGAAAGTAAGATAACTAAGGGGGTATTCTTCGCTG GAGAAGTATTAGATATTGATGGTGTTACAGGTGGTTTTAATTTCCAGCATTGTTGGACAAGTGGCTGGGTAGCAGGGAAA TCAATAGTTGTTAAGTATTCATAA
Upstream 100 bases:
>100_bases TTTTTTAAGATTTAGTTTTGACTCAATAAATAAAAGTAATAAATAATTTATTTATTTATTACTTTTATTAAAATCTAAAT TATTAGAAGTTTATTCTTTT
Downstream 100 bases:
>100_bases CTTGAAGCAATATTTACAAATTTTTAATATTGAATATCTTAAAAAAATTGAATATGTGTAGATTTAATTTTAGCCAAGTG AAGCGATTAGTGCTGGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MISDLVIIGGGASGFMAAITAITNGLRSVVILEGASKVLEKVRISGGGRCNLTNSCFEISDLVNNYPRGEKQLLGLFNRF STTEAFDWFQEKGLSLKVEKDGRVFPCSDSSEEVISCLTNVAKNSGVKVLTNSYVKQISKIEGGFNLLVKGDNSFKAKNI LICTGGHSSGRRLAMSLGHSIIHPVPSLFSFSTVDSSLKDCSGITLDVQVKLNVNNKKYFEKGPILITHKGFSGPVILRL SAFSARNLYDNKYKAELRINWLCMNENEARLKIDLYKLENGKKLVFNYKPFDKLPRSLWKSFLLSLNIDSQLKWAELSKT KKESLIKYLIMKTYLIKGRGPFGEEFVTAGGVSLKEINFKTMESKITKGVFFAGEVLDIDGVTGGFNFQHCWTSGWVAGK SIVVKYS
Sequences:
>Translated_407_residues MISDLVIIGGGASGFMAAITAITNGLRSVVILEGASKVLEKVRISGGGRCNLTNSCFEISDLVNNYPRGEKQLLGLFNRF STTEAFDWFQEKGLSLKVEKDGRVFPCSDSSEEVISCLTNVAKNSGVKVLTNSYVKQISKIEGGFNLLVKGDNSFKAKNI LICTGGHSSGRRLAMSLGHSIIHPVPSLFSFSTVDSSLKDCSGITLDVQVKLNVNNKKYFEKGPILITHKGFSGPVILRL SAFSARNLYDNKYKAELRINWLCMNENEARLKIDLYKLENGKKLVFNYKPFDKLPRSLWKSFLLSLNIDSQLKWAELSKT KKESLIKYLIMKTYLIKGRGPFGEEFVTAGGVSLKEINFKTMESKITKGVFFAGEVLDIDGVTGGFNFQHCWTSGWVAGK SIVVKYS >Mature_407_residues MISDLVIIGGGASGFMAAITAITNGLRSVVILEGASKVLEKVRISGGGRCNLTNSCFEISDLVNNYPRGEKQLLGLFNRF STTEAFDWFQEKGLSLKVEKDGRVFPCSDSSEEVISCLTNVAKNSGVKVLTNSYVKQISKIEGGFNLLVKGDNSFKAKNI LICTGGHSSGRRLAMSLGHSIIHPVPSLFSFSTVDSSLKDCSGITLDVQVKLNVNNKKYFEKGPILITHKGFSGPVILRL SAFSARNLYDNKYKAELRINWLCMNENEARLKIDLYKLENGKKLVFNYKPFDKLPRSLWKSFLLSLNIDSQLKWAELSKT KKESLIKYLIMKTYLIKGRGPFGEEFVTAGGVSLKEINFKTMESKITKGVFFAGEVLDIDGVTGGFNFQHCWTSGWVAGK SIVVKYS
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI2367234, Length=401, Percent_Identity=25.9351620947631, Blast_Score=121, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 45004; Mature: 45004
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISDLVIIGGGASGFMAAITAITNGLRSVVILEGASKVLEKVRISGGGRCNLTNSCFEIS CCCCEEEEECCCHHHHHHHHHHHHCHHEEEEECCHHHHHHHHHCCCCCEECCCCHHHHHH DLVNNYPRGEKQLLGLFNRFSTTEAFDWFQEKGLSLKVEKDGRVFPCSDSSEEVISCLTN HHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCEECCCCCHHHHHHHHHH VAKNSGVKVLTNSYVKQISKIEGGFNLLVKGDNSFKAKNILICTGGHSSGRRLAMSLGHS HHHCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHCCH IIHPVPSLFSFSTVDSSLKDCSGITLDVQVKLNVNNKKYFEKGPILITHKGFSGPVILRL HHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEECCCCEEEEECCCCCCEEEEE SAFSARNLYDNKYKAELRINWLCMNENEARLKIDLYKLENGKKLVFNYKPFDKLPRSLWK ECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHH SFLLSLNIDSQLKWAELSKTKKESLIKYLIMKTYLIKGRGPFGEEFVTAGGVSLKEINFK HHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCCEEEECCHH TMESKITKGVFFAGEVLDIDGVTGGFNFQHCWTSGWVAGKSIVVKYS HHHHHHHCCEEEECEEEEECCCCCCCCCCEEECCCEEECCEEEEEEC >Mature Secondary Structure MISDLVIIGGGASGFMAAITAITNGLRSVVILEGASKVLEKVRISGGGRCNLTNSCFEIS CCCCEEEEECCCHHHHHHHHHHHHCHHEEEEECCHHHHHHHHHCCCCCEECCCCHHHHHH DLVNNYPRGEKQLLGLFNRFSTTEAFDWFQEKGLSLKVEKDGRVFPCSDSSEEVISCLTN HHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCEECCCCCHHHHHHHHHH VAKNSGVKVLTNSYVKQISKIEGGFNLLVKGDNSFKAKNILICTGGHSSGRRLAMSLGHS HHHCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHCCH IIHPVPSLFSFSTVDSSLKDCSGITLDVQVKLNVNNKKYFEKGPILITHKGFSGPVILRL HHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEECCCCEEEEECCCCCCEEEEE SAFSARNLYDNKYKAELRINWLCMNENEARLKIDLYKLENGKKLVFNYKPFDKLPRSLWK ECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHH SFLLSLNIDSQLKWAELSKTKKESLIKYLIMKTYLIKGRGPFGEEFVTAGGVSLKEINFK HHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCCEEEECCHH TMESKITKGVFFAGEVLDIDGVTGGFNFQHCWTSGWVAGKSIVVKYS HHHHHHHCCEEEECEEEEECCCCCCCCCCEEECCCEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]