| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025458
Identifier: 124025458
GI number: 124025458
Start: 690341
End: 690742
Strand: Reverse
Name: 124025458
Synonym: NATL1_07511
Alternate gene names: NA
Gene position: 690742-690341 (Counterclockwise)
Preceding gene: 124025459
Following gene: 124025457
Centisome position: 37.04
GC content: 31.34
Gene sequence:
>402_bases ATGTCTACAAATAATATTAATATCTGCAAATTAGAAGACCTTGATAAATTAAGATCTGCTCCTAAGCTAAATAAAAAACA ATCAAAAAACCTTTTTAATCAACTCAGGCATCTTATTCATAAATCAGATTGGATAACGATAGGAGTAATGTCACCTTCAT TAAAAAGAGGAATAAATGCAGTTAGAAGAATAGAAGAAAAATTTGAATATGACGAAATGAAATGCATCACATTCCCTAGT TCTGACGGTCCAATATTCCTAAAGGCGAACCAAAAAACAGGTGAAATTCACGCTAGGGTCGAATTTGGCTTGGGTGAAGG TATATTGATTACTTGTCAAAATTATGAAAATTCATTGACCTCTAAAACAATTGGTCCCTTTCCATTAGATTTCTTTGATT AA
Upstream 100 bases:
>100_bases GAAAAGGTAAGACTATAAATATATAAAAATATTATAATCTTATAAATAAAAATAAAAACACAATAGTCTAGCTGATAAAA TAGATAAAATAACTATCTAA
Downstream 100 bases:
>100_bases GAATAATATTTAATAGCTCCTAAGAGAGTAATAATATTTTAAATAGCTAGTAAATTTGAAATTAATCAAAAAAAAAAAAA TAGTGTGAAATTGAATGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSTNNINICKLEDLDKLRSAPKLNKKQSKNLFNQLRHLIHKSDWITIGVMSPSLKRGINAVRRIEEKFEYDEMKCITFPS SDGPIFLKANQKTGEIHARVEFGLGEGILITCQNYENSLTSKTIGPFPLDFFD
Sequences:
>Translated_133_residues MSTNNINICKLEDLDKLRSAPKLNKKQSKNLFNQLRHLIHKSDWITIGVMSPSLKRGINAVRRIEEKFEYDEMKCITFPS SDGPIFLKANQKTGEIHARVEFGLGEGILITCQNYENSLTSKTIGPFPLDFFD >Mature_132_residues STNNINICKLEDLDKLRSAPKLNKKQSKNLFNQLRHLIHKSDWITIGVMSPSLKRGINAVRRIEEKFEYDEMKCITFPSS DGPIFLKANQKTGEIHARVEFGLGEGILITCQNYENSLTSKTIGPFPLDFFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15189; Mature: 15057
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNNINICKLEDLDKLRSAPKLNKKQSKNLFNQLRHLIHKSDWITIGVMSPSLKRGINA CCCCCCCEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHH VRRIEEKFEYDEMKCITFPSSDGPIFLKANQKTGEIHARVEFGLGEGILITCQNYENSLT HHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCCC SKTIGPFPLDFFD CCCCCCCCCCCCC >Mature Secondary Structure STNNINICKLEDLDKLRSAPKLNKKQSKNLFNQLRHLIHKSDWITIGVMSPSLKRGINA CCCCCCEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHH VRRIEEKFEYDEMKCITFPSSDGPIFLKANQKTGEIHARVEFGLGEGILITCQNYENSLT HHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCCC SKTIGPFPLDFFD CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA