Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is mas1 [H]
Identifier: 124025403
GI number: 124025403
Start: 637817
End: 638530
Strand: Reverse
Name: mas1 [H]
Synonym: NATL1_06941
Alternate gene names: 124025403
Gene position: 638530-637817 (Counterclockwise)
Preceding gene: 124025404
Following gene: 124025400
Centisome position: 34.24
GC content: 32.49
Gene sequence:
>714_bases ATGAGAAAAATCCTTATAAGTGGAGCAAGTAGAGGTATAGGAAAAGCGATAGCAATAAAATTACTTAAAGAAGGACACTC GTTAAGCTTAGGAGTAAGAGAAAGAGACGATTTATTAAATACACCATTAGATCCAAAAATTAACAATTCAGATAGTTTCT TGGTTCACACCTATGATGCAACTGATCAAAACTCATCAAAGAAATGGGTAGACAAAACATTTGAAACATTTAAAAGTGTT GATACTATTATTCATTGCGCTGGTATATTCAAAACAACAAAACTATTATTTAATGATAATGAAATGAAAGATATTGAAGA TCTATGGAAAGTTAATGTGATGGGGCCATGGATACTAACAAAACATGCTTGGAAGTATTTATCTCTGAGCAATTCAGCAC GAATTATTGTATTGGTATCAATGAGTGGAAAACGATCAAAAGGTAACTTGTGTGGCTATTCTATGAGTAAATTCGCTTTA ATGAGCTTATGCCAAACAATGAGAAATGAAGGATGGGGAAACGGTATTAGAGTTACAGCTATTTGCCCAGGCTGGGTAAA TACAGACATGGCAAAAGAAATAAAACATTATCCCAAAAAAGATATGTCACAAGCAAATGATATTGCAAGTATTTGCTCCA ATTTACTTACTTTACCAAACAGTTCTATTCCTTTTGAAATCGCACTAAATTGTCAACTTGAAACAAACATTTAG
Upstream 100 bases:
>100_bases AGATGTTTAGGAAATCACCCTGGACTATCAAACAAGGCTTAATGAATATGCATGGTAGAGAATTAAATTTATTATTTAAA GCATTATTAGTTAATAATAA
Downstream 100 bases:
>100_bases AAGATAAGTCTTGTTTTTTTTTAAATAGGATTAGTAGTTTTTTTAAATGTATTCAAAACTCCCAGAATTGCCTGACGGAG ATACTTATGAAAATAGTTTC
Product: short-chain dehydrogenase/reductase
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MRKILISGASRGIGKAIAIKLLKEGHSLSLGVRERDDLLNTPLDPKINNSDSFLVHTYDATDQNSSKKWVDKTFETFKSV DTIIHCAGIFKTTKLLFNDNEMKDIEDLWKVNVMGPWILTKHAWKYLSLSNSARIIVLVSMSGKRSKGNLCGYSMSKFAL MSLCQTMRNEGWGNGIRVTAICPGWVNTDMAKEIKHYPKKDMSQANDIASICSNLLTLPNSSIPFEIALNCQLETNI
Sequences:
>Translated_237_residues MRKILISGASRGIGKAIAIKLLKEGHSLSLGVRERDDLLNTPLDPKINNSDSFLVHTYDATDQNSSKKWVDKTFETFKSV DTIIHCAGIFKTTKLLFNDNEMKDIEDLWKVNVMGPWILTKHAWKYLSLSNSARIIVLVSMSGKRSKGNLCGYSMSKFAL MSLCQTMRNEGWGNGIRVTAICPGWVNTDMAKEIKHYPKKDMSQANDIASICSNLLTLPNSSIPFEIALNCQLETNI >Mature_237_residues MRKILISGASRGIGKAIAIKLLKEGHSLSLGVRERDDLLNTPLDPKINNSDSFLVHTYDATDQNSSKKWVDKTFETFKSV DTIIHCAGIFKTTKLLFNDNEMKDIEDLWKVNVMGPWILTKHAWKYLSLSNSARIIVLVSMSGKRSKGNLCGYSMSKFAL MSLCQTMRNEGWGNGIRVTAICPGWVNTDMAKEIKHYPKKDMSQANDIASICSNLLTLPNSSIPFEIALNCQLETNI
Specific function: Reduces deoxy-fructosyl-glutamine to mannopine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4503817, Length=200, Percent_Identity=27, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI15277342, Length=231, Percent_Identity=26.4069264069264, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1787335, Length=233, Percent_Identity=25.7510729613734, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI87082100, Length=198, Percent_Identity=26.7676767676768, Blast_Score=69, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71994600, Length=195, Percent_Identity=28.2051282051282, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71994604, Length=194, Percent_Identity=28.8659793814433, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17561402, Length=221, Percent_Identity=25.3393665158371, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17508895, Length=197, Percent_Identity=25.8883248730964, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=199, Percent_Identity=29.1457286432161, Blast_Score=75, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6322861, Length=189, Percent_Identity=25.3968253968254, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648944, Length=227, Percent_Identity=27.3127753303965, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI281364494, Length=239, Percent_Identity=27.1966527196653, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28571387, Length=248, Percent_Identity=28.2258064516129, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI23397609, Length=193, Percent_Identity=26.9430051813472, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24644339, Length=188, Percent_Identity=26.5957446808511, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR013078 - InterPro: IPR015845 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short; PF00300 PGAM [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 26503; Mature: 26503
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKILISGASRGIGKAIAIKLLKEGHSLSLGVRERDDLLNTPLDPKINNSDSFLVHTYDA CCEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCCCCCCCCCCEEEEEECC TDQNSSKKWVDKTFETFKSVDTIIHCAGIFKTTKLLFNDNEMKDIEDLWKVNVMGPWILT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHEECCCCCCHHH KHAWKYLSLSNSARIIVLVSMSGKRSKGNLCGYSMSKFALMSLCQTMRNEGWGNGIRVTA HHHHHEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE ICPGWVNTDMAKEIKHYPKKDMSQANDIASICSNLLTLPNSSIPFEIALNCQLETNI ECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCC >Mature Secondary Structure MRKILISGASRGIGKAIAIKLLKEGHSLSLGVRERDDLLNTPLDPKINNSDSFLVHTYDA CCEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCCCCCCCCCCEEEEEECC TDQNSSKKWVDKTFETFKSVDTIIHCAGIFKTTKLLFNDNEMKDIEDLWKVNVMGPWILT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHEECCCCCCHHH KHAWKYLSLSNSARIIVLVSMSGKRSKGNLCGYSMSKFALMSLCQTMRNEGWGNGIRVTA HHHHHEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE ICPGWVNTDMAKEIKHYPKKDMSQANDIASICSNLLTLPNSSIPFEIALNCQLETNI ECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA