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The map label for this gene is dnaQ

Identifier: 124025389

GI number: 124025389

Start: 627221

End: 628099

Strand: Direct

Name: dnaQ

Synonym: NATL1_06801

Alternate gene names: NA

Gene position: 627221-628099 (Clockwise)

Preceding gene: 124025387

Following gene: 124025390

Centisome position: 33.64

GC content: 36.63

Gene sequence:

>879_bases
ATGATAATAGAAGCACGACTAATTAATTTTGAAGTGAAAGAAGAGCAGAATCATCAAAAAGAGAGTGAGCAGCTTAACTT
TTTAGATGAAACAACTAAAGAAATTGCTAATGAAAAGGAAAAAGATTTAGGAGTAAAAAGTCCTCTCCAATCAAAGGATG
AACGGTTCGGAATCTTAAGGAACGAACATTTCCCTGAGAATATCTTGATTTTGGATACTGAAACCACTGGCCTTGACAAT
GAAAATGATGATTGTCTTGAAGTAGGTTCTATCCTTTTTAATGTAAAAAGTAGATCGGTGCTAGCGCAGCAATCTTTTCT
TTTACCAGTTGAAATTAATAACGCAGAAAAAATAAACAATATTCCTGCTGAAATAACTAGATTGCCTCAACCTCTCTCTG
AAGCAATTAAATATTTTGAATCTTTAGTTCGAGTATCAAATGTGATTGTTGCTCACAATGCAGAATTTGATAAGAAATGG
TTTGGTCTCAAGAAATTGCCTCAGATTGAAAAACCATGGATTTGTTCTATGGACGATATAACTTGGCCAGCTGATCGACA
ATTGAAGACTCGTCCTTCTGTAAGAGATCTTGCATTGGCTTATGGTGTGCCGGTCTGGAATGCACATAGAGCTTTGACCG
ATTGCATATATCTGGCAGAGGTTTTTATAAGATGTACTGAACTTGAAAAACTATTGATTAGAGCGTTAGAGCCAAAAGTT
TTGCTTCGAGCTGAGATCTCCTATGAGGATAGGTATTTAGCGAAAAATGCTGGCTTTAGGTGGAATGATGCAATTAAGGG
CGCTTGGTCTAGGAAAATGAGTCGTCGTGATAAGGAGAAATTAGAGTTTCCTGTTCATGAGGTTGACTTTCATGCTTGA

Upstream 100 bases:

>100_bases
TAATCACTCTTTAAGAGAACTAGAAAACGATTATAAATTAAAAATAAGTATCTTTTATTTCTAATGTTCTACTAAGTTTT
TATTCAACTATGTTTTTTTG

Downstream 100 bases:

>100_bases
AGTATATTTTTCATAAAGTACTCATTTCAAATCTTTGCTATGTGTTTAATGTATTGATTAATGAGTTTTTCTAGAGTTTT
CTCCATGATTGATTTATGAG

Product: putative DNA polymerase III, epsilon subunit

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Subunit Epsilon; Exonuclease; Exonuclease RNAse T And DNA Polymerase III; Exonuclease RNAse T/DNA Polymerase III; 3--5' Exonuclease; Exonuclease Family

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIIEARLINFEVKEEQNHQKESEQLNFLDETTKEIANEKEKDLGVKSPLQSKDERFGILRNEHFPENILILDTETTGLDN
ENDDCLEVGSILFNVKSRSVLAQQSFLLPVEINNAEKINNIPAEITRLPQPLSEAIKYFESLVRVSNVIVAHNAEFDKKW
FGLKKLPQIEKPWICSMDDITWPADRQLKTRPSVRDLALAYGVPVWNAHRALTDCIYLAEVFIRCTELEKLLIRALEPKV
LLRAEISYEDRYLAKNAGFRWNDAIKGAWSRKMSRRDKEKLEFPVHEVDFHA

Sequences:

>Translated_292_residues
MIIEARLINFEVKEEQNHQKESEQLNFLDETTKEIANEKEKDLGVKSPLQSKDERFGILRNEHFPENILILDTETTGLDN
ENDDCLEVGSILFNVKSRSVLAQQSFLLPVEINNAEKINNIPAEITRLPQPLSEAIKYFESLVRVSNVIVAHNAEFDKKW
FGLKKLPQIEKPWICSMDDITWPADRQLKTRPSVRDLALAYGVPVWNAHRALTDCIYLAEVFIRCTELEKLLIRALEPKV
LLRAEISYEDRYLAKNAGFRWNDAIKGAWSRKMSRRDKEKLEFPVHEVDFHA
>Mature_292_residues
MIIEARLINFEVKEEQNHQKESEQLNFLDETTKEIANEKEKDLGVKSPLQSKDERFGILRNEHFPENILILDTETTGLDN
ENDDCLEVGSILFNVKSRSVLAQQSFLLPVEINNAEKINNIPAEITRLPQPLSEAIKYFESLVRVSNVIVAHNAEFDKKW
FGLKKLPQIEKPWICSMDDITWPADRQLKTRPSVRDLALAYGVPVWNAHRALTDCIYLAEVFIRCTELEKLLIRALEPKV
LLRAEISYEDRYLAKNAGFRWNDAIKGAWSRKMSRRDKEKLEFPVHEVDFHA

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 33873; Mature: 33873

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIEARLINFEVKEEQNHQKESEQLNFLDETTKEIANEKEKDLGVKSPLQSKDERFGILR
CEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHCCCC
NEHFPENILILDTETTGLDNENDDCLEVGSILFNVKSRSVLAQQSFLLPVEINNAEKINN
CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHCC
IPAEITRLPQPLSEAIKYFESLVRVSNVIVAHNAEFDKKWFGLKKLPQIEKPWICSMDDI
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCHHHCCCCCCCCEECCCCC
TWPADRQLKTRPSVRDLALAYGVPVWNAHRALTDCIYLAEVFIRCTELEKLLIRALEPKV
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LLRAEISYEDRYLAKNAGFRWNDAIKGAWSRKMSRRDKEKLEFPVHEVDFHA
EEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure
MIIEARLINFEVKEEQNHQKESEQLNFLDETTKEIANEKEKDLGVKSPLQSKDERFGILR
CEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHCCCC
NEHFPENILILDTETTGLDNENDDCLEVGSILFNVKSRSVLAQQSFLLPVEINNAEKINN
CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHCC
IPAEITRLPQPLSEAIKYFESLVRVSNVIVAHNAEFDKKWFGLKKLPQIEKPWICSMDDI
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCHHHCCCCCCCCEECCCCC
TWPADRQLKTRPSVRDLALAYGVPVWNAHRALTDCIYLAEVFIRCTELEKLLIRALEPKV
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LLRAEISYEDRYLAKNAGFRWNDAIKGAWSRKMSRRDKEKLEFPVHEVDFHA
EEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA