| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025339
Identifier: 124025339
GI number: 124025339
Start: 571272
End: 571541
Strand: Direct
Name: 124025339
Synonym: NATL1_06281
Alternate gene names: NA
Gene position: 571272-571541 (Clockwise)
Preceding gene: 124025338
Following gene: 124025346
Centisome position: 30.64
GC content: 35.19
Gene sequence:
>270_bases ATGGATCAATTTGTCCTTTGGGGGTCTTACTGTGAAGATGCTCTACTAAAGAGAACACCTTTTAGGGAAGAGCATCTTCA AAGGCTCTCATTACTTAAGGAAAAAGGTATATTAATAACTTTAGGCCCGACAAAATGTAATAGATATGTTTTTGGGATAT TTAAATCTGAAGACATTGAATATATTAGAAGTCTTATCAAAGAGGACGTTTACTGGAGAGAGGGAATATGGACTGATTTC GAAATTTACTCTTGGACCCAAGCTTTTTGA
Upstream 100 bases:
>100_bases CTAATTAATATTTTTTTAAATAGCAACAGATCAAGCTGAATATTGAATTCTTTTCTATGTTTTATCTTGAGAAATATTGT CTTTATTTAACTTGAAAACC
Downstream 100 bases:
>100_bases GCTTGCTCCCAGACCCAATTAGCTACGATTTGATCGCCATTATCTCCTAGCTCATCTTCATAACCACTCATTATCCCTAC CCCTTGTCTTGCGATATTCG
Product: YciI-like protein
Products: NA
Alternate protein names: YCII-Related Domain Superfamily; YCII-Like Protein; YCII-Related Domain Superfamily Protein; YciI-Like-Protein; YCII-Related
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MDQFVLWGSYCEDALLKRTPFREEHLQRLSLLKEKGILITLGPTKCNRYVFGIFKSEDIEYIRSLIKEDVYWREGIWTDF EIYSWTQAF
Sequences:
>Translated_89_residues MDQFVLWGSYCEDALLKRTPFREEHLQRLSLLKEKGILITLGPTKCNRYVFGIFKSEDIEYIRSLIKEDVYWREGIWTDF EIYSWTQAF >Mature_89_residues MDQFVLWGSYCEDALLKRTPFREEHLQRLSLLKEKGILITLGPTKCNRYVFGIFKSEDIEYIRSLIKEDVYWREGIWTDF EIYSWTQAF
Specific function: Unknown
COG id: COG2350
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10776; Mature: 10776
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQFVLWGSYCEDALLKRTPFREEHLQRLSLLKEKGILITLGPTKCNRYVFGIFKSEDIE CCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCHH YIRSLIKEDVYWREGIWTDFEIYSWTQAF HHHHHHHHCCHHCCCCCCCCEECCEECCC >Mature Secondary Structure MDQFVLWGSYCEDALLKRTPFREEHLQRLSLLKEKGILITLGPTKCNRYVFGIFKSEDIE CCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCHH YIRSLIKEDVYWREGIWTDFEIYSWTQAF HHHHHHHHCCHHCCCCCCCCEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA