| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is csoS3
Identifier: 124025318
GI number: 124025318
Start: 553630
End: 555189
Strand: Direct
Name: csoS3
Synonym: NATL1_06071
Alternate gene names: NA
Gene position: 553630-555189 (Clockwise)
Preceding gene: 124025317
Following gene: 124025319
Centisome position: 29.69
GC content: 35.58
Gene sequence:
>1560_bases ATGGCCTATCGTAATTTGGCCAAGAAATCTCGTCGTGGGCCTACAGCTCCTATGAAGAGGTTTGTCGACCTAGAGACAAA GAATTTGAATTCTGAAGTTATTAAAACTACTAATTCTTTCTCCGATGAAATAAAAACTATTAGCTCTTTTTCTACTGATC ATCCCTTAACCAATTCTCAGGAAAACCAGAAGTTAAATCAATACGAAAATAAGGTTAAAGGTCGATTTGACAATATTGTT CCTCTTTTAAAAAGAGTATCTAGTCTTCAAAATGATTTGAATTTTGTAGAAAGAGCTCAAAATTTATGTCGATCAGAATT AGGTTATGAGTTGCCACTGCATATACTTGAAAAGGCATGGGTTGGAAGTGTAGACATAAGTGCCTTGTTTGCATGGTGTG TTTTTCAGTCACACCAATTAACGAGTAATGAATTTTTTAATTCAGATCCAATAGAGGGATCTGAAAATAGTCAATATGCT AAATCTTTTCAGTCATTTCTTTATCAATGTGGGTTTCATCTTTTAGATATAACTCCTTGTGCAGATGGTCGATTAGCTCA TGCTATTTCTTATGCATTACGTATACCTTTTAGCTCTGTTAGGAGGCGTTCTCATGCAGGTGCACTATTTGATATTGAAA AAACAGTTAATCGTTGGATTAAAACCGAACATAGTAGATATAGAGAGTCAACTCCGAATTCTGCAACTGAGCCAACAAGA TATTTAAAATCAGTAATCTATCATTTTAGTTCTGTTGACCCTACACACCAAGGATGTGCTGCTCATGGTAGTAATGATGA ATTAGCAGCATCAGAAGGCCTACAGCGATTATTAGATTTTAGGGAAGCAGTCGAAAATAGTTTTTGTTGTGGTGCCTCTG TTGATTTGCTTTTAATTGGTATTGATACGGATACAGATGCAATAAGAGTTCATACACCTTCGAAAACTAATGAAGTTGAT TTGAAATCATGGGTTTGTGCAAATCAAATATACAAAGAGACTCAATTTCTAAAAGCTGAAGAGGCTCTTCAAAAAATTCA AGAAAACATCAAAAGGGTTTGCCCTGGAGAAACAGATCCAAATATGGTTATGTTTATTACCAGACTCATTTCAAATAATA TTTCTCAAATTGATTATGTTAAGAATTTTCATTCCGGAAGCTACCAAGATGCAGGTCATGCTGAGAGGTTTATTGGTGTA GGTATTGGTTTTAAAGAAGTTCACTTAAGGAATCTTACTTATTTTGCTCATTTGGAGACTGTTGAACAAGGAGCTCCTGA TCTAGATGTCGGAGTGAAAATTTTTACAGGTCTCAATATCTCTAGGAGTTTACCAATCCCTATTGTTATTCGCTTTGATT ATTCAGGTAGTGTCCCTCATGCAAGGAATAGAGCATTATCTGATTGTCATAGAATTAATGAGGCTATTAAGTCTCGTTAT CGAGATTTAATAGATAATGGTTCACTTCACACATTTCTTACTATTCGAGATCGAGATAAAAAGGCTCCTGCAGAAGTTGT AGGCTCTTCCCTCGATCCAGTCACTCAGGAGGCTCACTAA
Upstream 100 bases:
>100_bases GAGGTTCCCGAACCAGACTTCCTGATCACTGGTTCTAGTGGCAATACAAGGGATGGCCAATTGGTTACTTTCTCTGGTGG AGCAAGAGGTTAAATAGTCA
Downstream 100 bases:
>100_bases ATGCTCATTTGTAAAGTTCTCAAACCACTTGTCTCAACCAATCGTATTCCAGGCTTTGAACATAAGCATTTACAGGTTGT ATTGGACGGCAGCTCAAAAA
Product: carboxysome shell protein CsoS3
Products: NA
Alternate protein names: Carboxysome Shell; Carboxysome Peptide; Carboxysome Shell Carbonic Anhydrase Epsilon
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MAYRNLAKKSRRGPTAPMKRFVDLETKNLNSEVIKTTNSFSDEIKTISSFSTDHPLTNSQENQKLNQYENKVKGRFDNIV PLLKRVSSLQNDLNFVERAQNLCRSELGYELPLHILEKAWVGSVDISALFAWCVFQSHQLTSNEFFNSDPIEGSENSQYA KSFQSFLYQCGFHLLDITPCADGRLAHAISYALRIPFSSVRRRSHAGALFDIEKTVNRWIKTEHSRYRESTPNSATEPTR YLKSVIYHFSSVDPTHQGCAAHGSNDELAASEGLQRLLDFREAVENSFCCGASVDLLLIGIDTDTDAIRVHTPSKTNEVD LKSWVCANQIYKETQFLKAEEALQKIQENIKRVCPGETDPNMVMFITRLISNNISQIDYVKNFHSGSYQDAGHAERFIGV GIGFKEVHLRNLTYFAHLETVEQGAPDLDVGVKIFTGLNISRSLPIPIVIRFDYSGSVPHARNRALSDCHRINEAIKSRY RDLIDNGSLHTFLTIRDRDKKAPAEVVGSSLDPVTQEAH
Sequences:
>Translated_519_residues MAYRNLAKKSRRGPTAPMKRFVDLETKNLNSEVIKTTNSFSDEIKTISSFSTDHPLTNSQENQKLNQYENKVKGRFDNIV PLLKRVSSLQNDLNFVERAQNLCRSELGYELPLHILEKAWVGSVDISALFAWCVFQSHQLTSNEFFNSDPIEGSENSQYA KSFQSFLYQCGFHLLDITPCADGRLAHAISYALRIPFSSVRRRSHAGALFDIEKTVNRWIKTEHSRYRESTPNSATEPTR YLKSVIYHFSSVDPTHQGCAAHGSNDELAASEGLQRLLDFREAVENSFCCGASVDLLLIGIDTDTDAIRVHTPSKTNEVD LKSWVCANQIYKETQFLKAEEALQKIQENIKRVCPGETDPNMVMFITRLISNNISQIDYVKNFHSGSYQDAGHAERFIGV GIGFKEVHLRNLTYFAHLETVEQGAPDLDVGVKIFTGLNISRSLPIPIVIRFDYSGSVPHARNRALSDCHRINEAIKSRY RDLIDNGSLHTFLTIRDRDKKAPAEVVGSSLDPVTQEAH >Mature_518_residues AYRNLAKKSRRGPTAPMKRFVDLETKNLNSEVIKTTNSFSDEIKTISSFSTDHPLTNSQENQKLNQYENKVKGRFDNIVP LLKRVSSLQNDLNFVERAQNLCRSELGYELPLHILEKAWVGSVDISALFAWCVFQSHQLTSNEFFNSDPIEGSENSQYAK SFQSFLYQCGFHLLDITPCADGRLAHAISYALRIPFSSVRRRSHAGALFDIEKTVNRWIKTEHSRYRESTPNSATEPTRY LKSVIYHFSSVDPTHQGCAAHGSNDELAASEGLQRLLDFREAVENSFCCGASVDLLLIGIDTDTDAIRVHTPSKTNEVDL KSWVCANQIYKETQFLKAEEALQKIQENIKRVCPGETDPNMVMFITRLISNNISQIDYVKNFHSGSYQDAGHAERFIGVG IGFKEVHLRNLTYFAHLETVEQGAPDLDVGVKIFTGLNISRSLPIPIVIRFDYSGSVPHARNRALSDCHRINEAIKSRYR DLIDNGSLHTFLTIRDRDKKAPAEVVGSSLDPVTQEAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58595; Mature: 58463
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYRNLAKKSRRGPTAPMKRFVDLETKNLNSEVIKTTNSFSDEIKTISSFSTDHPLTNSQ CCCHHHHHHHCCCCCHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH ENQKLNQYENKVKGRFDNIVPLLKRVSSLQNDLNFVERAQNLCRSELGYELPLHILEKAW HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VGSVDISALFAWCVFQSHQLTSNEFFNSDPIEGSENSQYAKSFQSFLYQCGFHLLDITPC CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC ADGRLAHAISYALRIPFSSVRRRSHAGALFDIEKTVNRWIKTEHSRYRESTPNSATEPTR CCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHH YLKSVIYHFSSVDPTHQGCAAHGSNDELAASEGLQRLLDFREAVENSFCCGASVDLLLIG HHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE IDTDTDAIRVHTPSKTNEVDLKSWVCANQIYKETQFLKAEEALQKIQENIKRVCPGETDP ECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NMVMFITRLISNNISQIDYVKNFHSGSYQDAGHAERFIGVGIGFKEVHLRNLTYFAHLET HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH VEQGAPDLDVGVKIFTGLNISRSLPIPIVIRFDYSGSVPHARNRALSDCHRINEAIKSRY HHCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH RDLIDNGSLHTFLTIRDRDKKAPAEVVGSSLDPVTQEAH HHHHCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure AYRNLAKKSRRGPTAPMKRFVDLETKNLNSEVIKTTNSFSDEIKTISSFSTDHPLTNSQ CCHHHHHHHCCCCCHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH ENQKLNQYENKVKGRFDNIVPLLKRVSSLQNDLNFVERAQNLCRSELGYELPLHILEKAW HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VGSVDISALFAWCVFQSHQLTSNEFFNSDPIEGSENSQYAKSFQSFLYQCGFHLLDITPC CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC ADGRLAHAISYALRIPFSSVRRRSHAGALFDIEKTVNRWIKTEHSRYRESTPNSATEPTR CCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHH YLKSVIYHFSSVDPTHQGCAAHGSNDELAASEGLQRLLDFREAVENSFCCGASVDLLLIG HHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE IDTDTDAIRVHTPSKTNEVDLKSWVCANQIYKETQFLKAEEALQKIQENIKRVCPGETDP ECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NMVMFITRLISNNISQIDYVKNFHSGSYQDAGHAERFIGVGIGFKEVHLRNLTYFAHLET HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH VEQGAPDLDVGVKIFTGLNISRSLPIPIVIRFDYSGSVPHARNRALSDCHRINEAIKSRY HHCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH RDLIDNGSLHTFLTIRDRDKKAPAEVVGSSLDPVTQEAH HHHHCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA