Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025278
Identifier: 124025278
GI number: 124025278
Start: 514226
End: 514687
Strand: Direct
Name: 124025278
Synonym: NATL1_05671
Alternate gene names: NA
Gene position: 514226-514687 (Clockwise)
Preceding gene: 124025273
Following gene: 124025279
Centisome position: 27.58
GC content: 31.6
Gene sequence:
>462_bases ATGTTTAACGGGTCTGTGAATTCAGGGACAAATGGAAGATCAGAGGAGTTTTTAGATAAAGGGTTGAATACAGCTTCTAA CTCAAGTGATTCTTTGTTGACTATTGACGAAGTTCAGAAAACATTAAATAGATCTAGAGCTTCCGTATACAGGTATACAA ATACTGACACAAGAAATCTTAATCCCCCTTTCAATCCTAGAAAACTAAACACTGAATTTAGAAGCGATCAAAAAGATCAA TTACTTTTTCATCCCAATGAAGTTGCAAGATTTGCAAAAGATATACTCAGAATTAAAGAAGTAACTTTAGAAATATTAAA TTCTCCATCATCTGAAACACAAAATATTCTAAATGCAATACTTGATGAGTTAAGAATTATAAGGAATAAAATTGATGGAC AAGCTGATAAGAATCACTCTATTCCTAATCATTTACAAGATCCTGATAAAAAGGCTGCTTAG
Upstream 100 bases:
>100_bases GGAATCATGTTGTTTTTTTAAAGTGTCCAATTGTACGTGGTCTAAATTAGATTATTCTGCTAATTTCTTCCACATGTTTT CCTAGAAGCTTTCTTTAGCA
Downstream 100 bases:
>100_bases TTATTCTTAATTGTGGGATAGTATCTACATACATTCACATTAATTAAGAATTTTAATTGATTTCCACGCATTTGACTAAC GGTTTATTTATTTCAAACAT
Product: resolvase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MFNGSVNSGTNGRSEEFLDKGLNTASNSSDSLLTIDEVQKTLNRSRASVYRYTNTDTRNLNPPFNPRKLNTEFRSDQKDQ LLFHPNEVARFAKDILRIKEVTLEILNSPSSETQNILNAILDELRIIRNKIDGQADKNHSIPNHLQDPDKKAA
Sequences:
>Translated_153_residues MFNGSVNSGTNGRSEEFLDKGLNTASNSSDSLLTIDEVQKTLNRSRASVYRYTNTDTRNLNPPFNPRKLNTEFRSDQKDQ LLFHPNEVARFAKDILRIKEVTLEILNSPSSETQNILNAILDELRIIRNKIDGQADKNHSIPNHLQDPDKKAA >Mature_153_residues MFNGSVNSGTNGRSEEFLDKGLNTASNSSDSLLTIDEVQKTLNRSRASVYRYTNTDTRNLNPPFNPRKLNTEFRSDQKDQ LLFHPNEVARFAKDILRIKEVTLEILNSPSSETQNILNAILDELRIIRNKIDGQADKNHSIPNHLQDPDKKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17337; Mature: 17337
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNGSVNSGTNGRSEEFLDKGLNTASNSSDSLLTIDEVQKTLNRSRASVYRYTNTDTRNL CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCC NPPFNPRKLNTEFRSDQKDQLLFHPNEVARFAKDILRIKEVTLEILNSPSSETQNILNAI CCCCCCCCCCCHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LDELRIIRNKIDGQADKNHSIPNHLQDPDKKAA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFNGSVNSGTNGRSEEFLDKGLNTASNSSDSLLTIDEVQKTLNRSRASVYRYTNTDTRNL CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCC NPPFNPRKLNTEFRSDQKDQLLFHPNEVARFAKDILRIKEVTLEILNSPSSETQNILNAI CCCCCCCCCCCHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LDELRIIRNKIDGQADKNHSIPNHLQDPDKKAA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA