Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025247
Identifier: 124025247
GI number: 124025247
Start: 485767
End: 486285
Strand: Direct
Name: 124025247
Synonym: NATL1_05361
Alternate gene names: NA
Gene position: 485767-486285 (Clockwise)
Preceding gene: 124025246
Following gene: 124025248
Centisome position: 26.05
GC content: 39.11
Gene sequence:
>519_bases ATGTCCTTGAGTCGATCACTCGATCTTCCTGCATTGGGACGAGTTGATACTCTCGCTCAGGAATTGGCCTTGTTGAAAAA CGAGGGTAAAAGAAGAATTGCTTTTTTAGGTAGTAGGCATGTACCTGTAGTTTCTATTCATATTGTTGAATTAATAGCTA GGTCTTTGGCTCAAGAGGGCCATTCGATAATCACTTCAGGCTCTCAAGGTGTAAATGCTGCAGTCATTAGAGCGGTTCTA GATGTTAACCCCTCTCTATTAACTGTTTTGCTGCCTCAGTCTCTTGACAGGCAAACTGCAGAGGTAAAGGATCTTCTTGG TAGCGTTTTACATCTAATAGAGAAAGAGGACAATAATGATTTGCCTTTGCCAATGGCAAGCAGTCTTTGTAATCAAGAAA TTATTAACAGATGTGATCAATTAATTTGTTTCGCATTTCATGATAGTGAAACATTATTGAGTAGTTGCCATAGTGCCGAA GATATGGGAAAAGTAGTGAGCCTTATGTTTTTTGATTGA
Upstream 100 bases:
>100_bases TTAGTACAAGAACATTGCGATCTCGATCGAATCTTTAAAACTTTAGGAATTTCTTCTTGAGTTTATGAATAATGGCTACC TTTAAATTATCCGAATTAGT
Downstream 100 bases:
>100_bases TTTTCACTCAAAGACAATCTTCTACCTATTGATACTTTTTCTTAACCTACGAAATATCTCACAAGTATATTTACAAGCAA TCTTGGTTTTTTTTCATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSLSRSLDLPALGRVDTLAQELALLKNEGKRRIAFLGSRHVPVVSIHIVELIARSLAQEGHSIITSGSQGVNAAVIRAVL DVNPSLLTVLLPQSLDRQTAEVKDLLGSVLHLIEKEDNNDLPLPMASSLCNQEIINRCDQLICFAFHDSETLLSSCHSAE DMGKVVSLMFFD
Sequences:
>Translated_172_residues MSLSRSLDLPALGRVDTLAQELALLKNEGKRRIAFLGSRHVPVVSIHIVELIARSLAQEGHSIITSGSQGVNAAVIRAVL DVNPSLLTVLLPQSLDRQTAEVKDLLGSVLHLIEKEDNNDLPLPMASSLCNQEIINRCDQLICFAFHDSETLLSSCHSAE DMGKVVSLMFFD >Mature_171_residues SLSRSLDLPALGRVDTLAQELALLKNEGKRRIAFLGSRHVPVVSIHIVELIARSLAQEGHSIITSGSQGVNAAVIRAVLD VNPSLLTVLLPQSLDRQTAEVKDLLGSVLHLIEKEDNNDLPLPMASSLCNQEIINRCDQLICFAFHDSETLLSSCHSAED MGKVVSLMFFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18738; Mature: 18607
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSRSLDLPALGRVDTLAQELALLKNEGKRRIAFLGSRHVPVVSIHIVELIARSLAQEG CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC HSIITSGSQGVNAAVIRAVLDVNPSLLTVLLPQSLDRQTAEVKDLLGSVLHLIEKEDNND CCEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC LPLPMASSLCNQEIINRCDQLICFAFHDSETLLSSCHSAEDMGKVVSLMFFD CCCHHHHHHHHHHHHHHHHHHEEHEECCCHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure SLSRSLDLPALGRVDTLAQELALLKNEGKRRIAFLGSRHVPVVSIHIVELIARSLAQEG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC HSIITSGSQGVNAAVIRAVLDVNPSLLTVLLPQSLDRQTAEVKDLLGSVLHLIEKEDNND CCEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC LPLPMASSLCNQEIINRCDQLICFAFHDSETLLSSCHSAEDMGKVVSLMFFD CCCHHHHHHHHHHHHHHHHHHEEHEECCCHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA