| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is mpeV [H]
Identifier: 124025101
GI number: 124025101
Start: 358854
End: 359717
Strand: Reverse
Name: mpeV [H]
Synonym: NATL1_03881
Alternate gene names: 124025101
Gene position: 359717-358854 (Counterclockwise)
Preceding gene: 124025103
Following gene: 124025097
Centisome position: 19.29
GC content: 32.75
Gene sequence:
>864_bases GTGGATAATTACTTGAACAGTGAAATATCGACTGAAGAAGAAAGTGAAAAGGCCAAGGGGGATAAACAAAACATAATGAG TAAGAAAAAATCAAGTCAAAAAGACATCAAGCTATTAATCAAAGGACTTAGTGATGAAAATGGTTTGGTAAGAAGAAATT ATGCAATAGCACTAGCCGAGGTTGGTTCGGCAGCGTTACCTGAATTAATCAAAGCTCTTCTGAATAGTAAAAACGTAATA CAGAGAAGAGCGGCAGCTAAGACTTTAAAGTTAGTTAACGATCCATCAGCTTTACCTCATTTAATAAAAGCACTTACCAG TGATTCAGATTCTGTAGTGCAATTTTCAGCAGCTGGTGCAATTGCAATTTTTGGAGAGGCTGCTGTTAATCATCTAATCA TTGTCTTGGAGAATCAAGAATATACAGAAATGCAATATGGTCTTGCAGCATGGTGTTTAGAATTTATTGGAGCTAAAGCC TCTAATGCAATAAAAAAAGCAGCTAAATCAAAAAACACCAATGTAAAATCAGCTGCAATTTCAGCACTTGAAGAACACAT TAGACAGTCCCAAGATCAGGAAGCAATTCAAATAGTAGAAAGGGCTATTAATGATCCTGCTGAAAATGTTCAGATTGAAG CTATTAAATTAGTTGGTAAATTGTATAGGATAGAATCATTAATTCCTACCTTAATATTAAAATTAAAACACAAAAATCCA GATATTCGAAAAGCTTCCATATTGTCATTAATCCAACTTAATATTAATGAAGCTATAAATCCACTCAGGGACCTTCTTAA AATTGAGCAAGATAAAAATGTTACCGCAATTATTAAATTAGCTATAAAAAAAATAAATAACTAA
Upstream 100 bases:
>100_bases TGAATGTAAAAGGATATTATTTATGAAAATACATGTAATAAAATTATAGTGAATTATTTAATCTAGATTATATAATACGC TTTCAAGGATATAAGAAAAA
Downstream 100 bases:
>100_bases AAGACTTAATAAAGAATCTGGAATATTAAATAATTTTGTCTCTCAAAATATCTTCCTTTATCATTTGATCAATAGATTTA TCATTTAATAAGTCTTCAAA
Product: HEAT repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MDNYLNSEISTEEESEKAKGDKQNIMSKKKSSQKDIKLLIKGLSDENGLVRRNYAIALAEVGSAALPELIKALLNSKNVI QRRAAAKTLKLVNDPSALPHLIKALTSDSDSVVQFSAAGAIAIFGEAAVNHLIIVLENQEYTEMQYGLAAWCLEFIGAKA SNAIKKAAKSKNTNVKSAAISALEEHIRQSQDQEAIQIVERAINDPAENVQIEAIKLVGKLYRIESLIPTLILKLKHKNP DIRKASILSLIQLNINEAINPLRDLLKIEQDKNVTAIIKLAIKKINN
Sequences:
>Translated_287_residues MDNYLNSEISTEEESEKAKGDKQNIMSKKKSSQKDIKLLIKGLSDENGLVRRNYAIALAEVGSAALPELIKALLNSKNVI QRRAAAKTLKLVNDPSALPHLIKALTSDSDSVVQFSAAGAIAIFGEAAVNHLIIVLENQEYTEMQYGLAAWCLEFIGAKA SNAIKKAAKSKNTNVKSAAISALEEHIRQSQDQEAIQIVERAINDPAENVQIEAIKLVGKLYRIESLIPTLILKLKHKNP DIRKASILSLIQLNINEAINPLRDLLKIEQDKNVTAIIKLAIKKINN >Mature_287_residues MDNYLNSEISTEEESEKAKGDKQNIMSKKKSSQKDIKLLIKGLSDENGLVRRNYAIALAEVGSAALPELIKALLNSKNVI QRRAAAKTLKLVNDPSALPHLIKALTSDSDSVVQFSAAGAIAIFGEAAVNHLIIVLENQEYTEMQYGLAAWCLEFIGAKA SNAIKKAAKSKNTNVKSAAISALEEHIRQSQDQEAIQIVERAINDPAENVQIEAIKLVGKLYRIESLIPTLILKLKHKNP DIRKASILSLIQLNINEAINPLRDLLKIEQDKNVTAIIKLAIKKINN
Specific function: An enzyme involved in the biosynthesis of bilin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpcE/RpcE/PecE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR004155 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31530; Mature: 31530
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNYLNSEISTEEESEKAKGDKQNIMSKKKSSQKDIKLLIKGLSDENGLVRRNYAIALAE CCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEHHHHHHHHH VGSAALPELIKALLNSKNVIQRRAAAKTLKLVNDPSALPHLIKALTSDSDSVVQFSAAGA HCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCH IAIFGEAAVNHLIIVLENQEYTEMQYGLAAWCLEFIGAKASNAIKKAAKSKNTNVKSAAI HEEHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHH SALEEHIRQSQDQEAIQIVERAINDPAENVQIEAIKLVGKLYRIESLIPTLILKLKHKNP HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DIRKASILSLIQLNINEAINPLRDLLKIEQDKNVTAIIKLAIKKINN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MDNYLNSEISTEEESEKAKGDKQNIMSKKKSSQKDIKLLIKGLSDENGLVRRNYAIALAE CCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEHHHHHHHHH VGSAALPELIKALLNSKNVIQRRAAAKTLKLVNDPSALPHLIKALTSDSDSVVQFSAAGA HCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCH IAIFGEAAVNHLIIVLENQEYTEMQYGLAAWCLEFIGAKASNAIKKAAKSKNTNVKSAAI HEEHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHH SALEEHIRQSQDQEAIQIVERAINDPAENVQIEAIKLVGKLYRIESLIPTLILKLKHKNP HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DIRKASILSLIQLNINEAINPLRDLLKIEQDKNVTAIIKLAIKKINN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8425055; 8419325 [H]