| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is cinA [C]
Identifier: 124025048
GI number: 124025048
Start: 309216
End: 310508
Strand: Reverse
Name: cinA [C]
Synonym: NATL1_03351
Alternate gene names: 124025048
Gene position: 310508-309216 (Counterclockwise)
Preceding gene: 124025049
Following gene: 124025047
Centisome position: 16.65
GC content: 33.64
Gene sequence:
>1293_bases GTGAAAACATCTAAAGAAATTACTATTAACAAAAAAAATAAATTTGGAGCAGAGATTTTATGCATTGGAAGTGAAATACT TCTAGGAAATATTGTAAATACAAATTCTCAATGGATAGCAGAGCAATTAGCAATTTTAGGAATACCACATTTCAGACAAA CCGTTATTGGAGATAACCCTGCAAGACTAGAAGAAGCAATACTTGAAGCATCTAATAGATCTGAAATTCTAATAACAACT GGTGGGCTTGGCCCAACTCCAGATGATATAACAACGAAGGTGATTGCTGATACTTTCAAAACACCTCTAGAACAAAGAAA TGATATATTGATTGACTTAAGAAACAAGTCAAAAGATAAGGATAGTAAATTATCCGATAGTCAAAAGAAGCAATCATTAG TCCCAAAAGGGGCTAAAATTATAAACAATTACTCCGGCACAGCTCCTGGTATTTACTGGAGCCCAAAGGAAAATTTTACA ATACTTACATTCCCTGGCGTCCCGAGTGAATTAAAAGAAATGTGGGCTAAAGAAGCATCAAAATTATTAATTAGTAATAA TTTATCAAAAGAAGTTATCTCTAGCAAAGTTTTACATTTTGCTGGGATAAGTGAATCATTACTAGCAGACAAAATTCCTC ATTTACTTATCTCTAAAAACCCAACTGTTGCAACTTATGCAAGAACTGGAGAAGTAAAGGTAAGAATCACAGCCAAAGGA GAGAATTCGGAAGAAACCAATAGATTGATAGAACCTATTAAAAAAGAATTAACTCAAATCACTGGATTAAAATGCTTTGG TATAGACAATGAAACTCTTGAAGAAATTGTATTTAAATTATTACTGAAAAGAAAAGAAACTATTGCTGTTGCAGAATCTT GTACTGGAGGCGGAATAGGTTCTAAACTTACAAAAATCCCTGGATCTTCAAAAATTTTCCATGGAGGTGTCATCGCATAT AACAATTCAATTAAACAGAGATTACTAGGGGTACCTGAGGAAATAATTAATACCCATGGTGCAGTTTCAAAGCCAGTTGT CGAATCAATGGCGAGAGGCGTCCAAATAAAATTCAAAGTTAACTGGGCTATCTCTGTCAGTGGAATTGCAGGACCCACCG GAGGAAGCAAATCAAAACCAGTTGGTCTAGTCAATTTTTGTATTAAGGGTCCAAAAACCCTTATTACATGGGAAGAAAAT TTTGGATCTAATAAGACAAGAGAAGATATTCAAAAATTAAGCGTTTTAAATGCTCTTGATAGATTACGTTTATCTATAAT CATGGCAAATTAA
Upstream 100 bases:
>100_bases AATATCATTGCAGATAGACTACTTAACCCTAACGATGAAGATATAAAGGAAAATTCAATCAATAAAGTATCTGAACTTTG CAATAAGTTTCCTTTATATA
Downstream 100 bases:
>100_bases GTCCTCATTATTGGATTTGAAAGTTGAGTTCTAGAACCCTCTACGACAAAGTTTGGAACTTCCATCAGGTAAAAGAATTA CCTGGAGGATCAACTCAACT
Product: molybdenum cofactor biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKTSKEITINKKNKFGAEILCIGSEILLGNIVNTNSQWIAEQLAILGIPHFRQTVIGDNPARLEEAILEASNRSEILITT GGLGPTPDDITTKVIADTFKTPLEQRNDILIDLRNKSKDKDSKLSDSQKKQSLVPKGAKIINNYSGTAPGIYWSPKENFT ILTFPGVPSELKEMWAKEASKLLISNNLSKEVISSKVLHFAGISESLLADKIPHLLISKNPTVATYARTGEVKVRITAKG ENSEETNRLIEPIKKELTQITGLKCFGIDNETLEEIVFKLLLKRKETIAVAESCTGGGIGSKLTKIPGSSKIFHGGVIAY NNSIKQRLLGVPEEIINTHGAVSKPVVESMARGVQIKFKVNWAISVSGIAGPTGGSKSKPVGLVNFCIKGPKTLITWEEN FGSNKTREDIQKLSVLNALDRLRLSIIMAN
Sequences:
>Translated_430_residues MKTSKEITINKKNKFGAEILCIGSEILLGNIVNTNSQWIAEQLAILGIPHFRQTVIGDNPARLEEAILEASNRSEILITT GGLGPTPDDITTKVIADTFKTPLEQRNDILIDLRNKSKDKDSKLSDSQKKQSLVPKGAKIINNYSGTAPGIYWSPKENFT ILTFPGVPSELKEMWAKEASKLLISNNLSKEVISSKVLHFAGISESLLADKIPHLLISKNPTVATYARTGEVKVRITAKG ENSEETNRLIEPIKKELTQITGLKCFGIDNETLEEIVFKLLLKRKETIAVAESCTGGGIGSKLTKIPGSSKIFHGGVIAY NNSIKQRLLGVPEEIINTHGAVSKPVVESMARGVQIKFKVNWAISVSGIAGPTGGSKSKPVGLVNFCIKGPKTLITWEEN FGSNKTREDIQKLSVLNALDRLRLSIIMAN >Mature_430_residues MKTSKEITINKKNKFGAEILCIGSEILLGNIVNTNSQWIAEQLAILGIPHFRQTVIGDNPARLEEAILEASNRSEILITT GGLGPTPDDITTKVIADTFKTPLEQRNDILIDLRNKSKDKDSKLSDSQKKQSLVPKGAKIINNYSGTAPGIYWSPKENFT ILTFPGVPSELKEMWAKEASKLLISNNLSKEVISSKVLHFAGISESLLADKIPHLLISKNPTVATYARTGEVKVRITAKG ENSEETNRLIEPIKKELTQITGLKCFGIDNETLEEIVFKLLLKRKETIAVAESCTGGGIGSKLTKIPGSSKIFHGGVIAY NNSIKQRLLGVPEEIINTHGAVSKPVVESMARGVQIKFKVNWAISVSGIAGPTGGSKSKPVGLVNFCIKGPKTLITWEEN FGSNKTREDIQKLSVLNALDRLRLSIIMAN
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family
Homologues:
Organism=Escherichia coli, GI1789052, Length=151, Percent_Identity=41.7218543046358, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1788583, Length=290, Percent_Identity=27.9310344827586, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1787818, Length=128, Percent_Identity=30.46875, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323832, Length=184, Percent_Identity=28.2608695652174, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CINAL_PROM1 (A2C089)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001014164.1 - ProteinModelPortal: A2C089 - SMR: A2C089 - STRING: A2C089 - GeneID: 4779190 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_03351 - eggNOG: COG1058 - HOGENOM: HBG449871 - OMA: NPTVAPY - ProtClustDB: CLSK716108 - BioCyc: PMAR167555:NATL1_03351-MONOMER - HAMAP: MF_00226_B - InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 - Gene3D: G3DSA:3.40.980.10 - PIRSF: PIRSF006728 - SMART: SM00852 - TIGRFAMs: TIGR00199 - TIGRFAMs: TIGR00200
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth
EC number: NA
Molecular weight: Translated: 46889; Mature: 46889
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSKEITINKKNKFGAEILCIGSEILLGNIVNTNSQWIAEQLAILGIPHFRQTVIGDNP CCCCCEEEEECCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHCCCCH ARLEEAILEASNRSEILITTGGLGPTPDDITTKVIADTFKTPLEQRNDILIDLRNKSKDK HHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCCC DSKLSDSQKKQSLVPKGAKIINNYSGTAPGIYWSPKENFTILTFPGVPSELKEMWAKEAS CHHCCHHHHHHHCCCCCHHHHCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHH KLLISNNLSKEVISSKVLHFAGISESLLADKIPHLLISKNPTVATYARTGEVKVRITAKG HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCEEECCCCCEEEEEECCEEEEEEEECC ENSEETNRLIEPIKKELTQITGLKCFGIDNETLEEIVFKLLLKRKETIAVAESCTGGGIG CCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCHHHEEHHCCCCCCCC SKLTKIPGSSKIFHGGVIAYNNSIKQRLLGVPEEIINTHGAVSKPVVESMARGVQIKFKV CHHHCCCCCCCEEECCEEEECCHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCEEEEEEE NWAISVSGIAGPTGGSKSKPVGLVNFCIKGPKTLITWEENFGSNKTREDIQKLSVLNALD EEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH RLRLSIIMAN HHEEEEEEEC >Mature Secondary Structure MKTSKEITINKKNKFGAEILCIGSEILLGNIVNTNSQWIAEQLAILGIPHFRQTVIGDNP CCCCCEEEEECCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHCCCCH ARLEEAILEASNRSEILITTGGLGPTPDDITTKVIADTFKTPLEQRNDILIDLRNKSKDK HHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCCC DSKLSDSQKKQSLVPKGAKIINNYSGTAPGIYWSPKENFTILTFPGVPSELKEMWAKEAS CHHCCHHHHHHHCCCCCHHHHCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHH KLLISNNLSKEVISSKVLHFAGISESLLADKIPHLLISKNPTVATYARTGEVKVRITAKG HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCEEECCCCCEEEEEECCEEEEEEEECC ENSEETNRLIEPIKKELTQITGLKCFGIDNETLEEIVFKLLLKRKETIAVAESCTGGGIG CCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCHHHEEHHCCCCCCCC SKLTKIPGSSKIFHGGVIAYNNSIKQRLLGVPEEIINTHGAVSKPVVESMARGVQIKFKV CHHHCCCCCCCEEECCEEEECCHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCEEEEEEE NWAISVSGIAGPTGGSKSKPVGLVNFCIKGPKTLITWEENFGSNKTREDIQKLSVLNALD EEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH RLRLSIIMAN HHEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA