Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
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Accession | NC_008818 |
Length | 1,667,163 |
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The map label for this gene is 124027701
Identifier: 124027701
GI number: 124027701
Start: 819458
End: 822394
Strand: Reverse
Name: 124027701
Synonym: Hbut_0824
Alternate gene names: NA
Gene position: 822394-819458 (Counterclockwise)
Preceding gene: 124027702
Following gene: 124027700
Centisome position: 49.33
GC content: 52.09
Gene sequence:
>2937_bases GTGAGAAAGCTCATAGCTCTAATCTTAATAGCGGTATTTGTCCTACCAAGCCTAGGCGTTGCGATTACAGCCCAGGCGCA AGGTGAGAAGGGTCCAGCATCAGACAAGGTGATCTGGAAGCAGGTTACATTAGAGCAAGTAGTGCAAGCACTAAAGTCTG GTGACATCGACGTTTACTTGTTCGGTCTAAGGCCAGCTGCCGCGCAGCAGCTTGTAGGCGAGAAAGGTATAGAGCTATAC CAGGCTCCAGCAGGCCTAGTAGACCTGGGCCTCAACCCAGCTCCAGTAATGATCGTAGAGCTGCCGGGCAAGCTAACCAA GGAGGAGGCAGCCACGAAACTAGGCGTAGACCCGGTAGTGATTGCCTACGCAACCTACGTGCCGTCGGGCGCTGAGGAGG TACCGCCAGTGGGTGTGAGTATTGAGGACAGGGACATCACTGTTGTAGAACTATGTGCCAAGATACCGGAGACCAGCGTA ACCAGCGCTGGTGGCAAGGTTCTCTGGCAGAGCGATAAGTTTGACATTAACCCGTTCTGCTTCAAGGAGATAAGGTTTGC CATGAACTACCTAGTGGACAGAGACTACATCGTAAAGAACATCTACAAGGGCTTTGCCATTGCCAGGTACGCTGTGTATG GCGCTGGCGACCCAACATACGTGGAGGTAATCGATGTAGTTGCCAAGTATAAGTTTAGCTACAATCCAACACTAGCCAAG GAGATTGTCTTCAGCGTGTTGCAGAAGGCTGGTGCCGAGTACAGGGATGGTGTATGGTACTACAATGGTAAGCCAATACA AGTCATAGGCATCATAAGGCAGGAGGACGAGCGTCTAGATATTGGTAAAATGTTCGCCGACGAGCTAGAGAAGACCATTG GCATCAAGGTGCTAAGGCAGATAGTACCCTTCGGTGAGGCAATCACTAAGGTATACGCGAGTGACCCCAAGGACTTCGAG TGGCACTTCTACACTGAGGGCTGGGGTAGGGGTGCAATAGACCGCTGGGACCCATGGATGGTGACACAGTTCGCAGCACC CTGGTTCGGCTGGGTAGTAGGCTGGGCTGAGCCAACCTGGTGGAACTACAGGAACGATACCATTGACGAGTACAGCAAGA TCATATCCCTAGGCGGCTTCAAGAGCAAGGAGGAATTCATTGACCTGCTAAAGAAGGCTACCGAGCTAAGCATACAAGAG AGCCTAAGGATCTGGATTGTATCCACTCTAGACACTTATCCAGCGAGGAGCGAGGTTAAGGGTGTCACCCTAGACCTAGG CGCTGGTCTGAGGTCACCATTCTTCATACGTGGCGCCTACGTAGCAGGCGGCGATGGCACACTAAAGGTTGGCCACAGAT GGGTATTCACTGCTAGAACTATCTGGAACCCATTCGGCGGCTTTGATGACGTATACAGCGTAGACCCAGCACGCGCAACC TACGATCCCGGCATATGGAGACACCCGTTCAATGGTGAGCCAATAGCATTCAGAACACCGTTCACAGTTGAGACTGCTGG GCCAGAGGGCAAGCTACCGGTACCCGACGATGCTGTCTGGTGGGATGCTGAGAACGACAGGTGGGTATACGCCAAGGATC TAGGCAGGATAGAGGCTGTCAGCAAGGTGGTATTCGATGTATCCAAGCTAGTTGGCAGCAAGTGGCACGACGGTGAGCCA ATAACCTTCGCGGACATAATGGCGTGGCTGGCAGAGAACCTAGACATAACCTATGACCCGCAGAAGAGCCAGATCGAGGG TGCAATCGCCTCTACGGCTAAGGAGATCTACGAAAAGATAGTAGCGTTCAGATTCCTGCCAAGCGAGAACAAGGTGGAGG TATACGTTGACTACTGGCACTTCGACCCCAACTACATTGCCGACTTCGCAGCATTCACGCTGTACAACCCCGCACCAGTA ATCTTCGCAATGGACTACCTAGCATTCGTCAAGAAGACCTATGCGCTCGACGAGACTAGGGCCAGGAAGGAGAACATACC ACAGCTCAACCTAGTACTAGCAGACCACGCCGCAGCTATAAAGGAGGCTCTTGACGAGATAAGTTACGACGCCTACAAGG GCTACTTCACACTACCAGACGGCACAGTGCTAATGACACCGGACGAGTGGGCTGACAGGATAGAGAAGGCCAAGGCATGG ATCGACACTTACGGTAACGCATGGATTAGCGATGGACCGTTCAAGCTGGTAAAGTTCGACAAGGACGCCCAGATGCTGGA GCTAGAGGCATTCAGAGACCCAACGTACCCATTCGGTCCAACTGACTGGGTATTCGGCCTGCCAGCACCGGTAACAATCA CTGGTATCAAGACACCGCTAGTACCGCCAGGCAAGGAGGCAAGGATCATAGTAACAGTTGCAGGTCCATCACCACTACAT GTCAAGTATGTGCTACGCGACCCAGAGACCAACAAGGTAATAGCTGTAGGCGAGGCTGAAGAGACACCTGGTGGCTTCCT AATCAAGCTGCCAGCCAGCCTGACAGCTACGCTGGCAGAATACTCTGTCTACGACCTAACAGTGATAGCTTATAGTGAAA GTGTAGCACTGCCAGCGGAGCAGACAGTATCGCTACAGACTACCGAGACGGCAGGGAAGATAGAACAAGTACAGGAGAAC ATCCAGAAGCAAATAGAGCAGCTAAGACAGCTACTAGGTGAGCAAGTGGCTAGCGCGATTAGTAACGCCATTAGTGGTGT AAACACACAAATACAAGACCTGCTAAAGACGGTGCAGCAGCTGCCAGACACGCTCAAGAGCAGTATAAGTGGGCTAGCAA CCAAGGACGATGTAGCAACAGCGACGAACAAGGCAGCTGCAGCAGAGAGTAAGGCCAACCTAGCACTAATAGTAAGTGTC ATCAACCTAATACTGCTACTAGCCATAGCCTACGGTGTCTTTGCAAGGCGTAGCTAA
Upstream 100 bases:
>100_bases AGCCAATAACTAGCATAGGAAATTTTTTTAACATCGCCTTATGCTTTACCTAAACACAACACGGATTAGGGTAGGAACCG CATACGCTGGGTGACCCATC
Downstream 100 bases:
>100_bases GCATAAACGCTAGCATGGCGTCAGCATGATTAGCAACTATTTCCCACAAGACGTTCCACACATTATTTTTCGCACACCCT CACCGGTCTTTCCTTCCATA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; ABC-Type Dipeptide/Oligopeptide Transport System; Peptide ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 978; Mature: 978
Protein sequence:
>978_residues MRKLIALILIAVFVLPSLGVAITAQAQGEKGPASDKVIWKQVTLEQVVQALKSGDIDVYLFGLRPAAAQQLVGEKGIELY QAPAGLVDLGLNPAPVMIVELPGKLTKEEAATKLGVDPVVIAYATYVPSGAEEVPPVGVSIEDRDITVVELCAKIPETSV TSAGGKVLWQSDKFDINPFCFKEIRFAMNYLVDRDYIVKNIYKGFAIARYAVYGAGDPTYVEVIDVVAKYKFSYNPTLAK EIVFSVLQKAGAEYRDGVWYYNGKPIQVIGIIRQEDERLDIGKMFADELEKTIGIKVLRQIVPFGEAITKVYASDPKDFE WHFYTEGWGRGAIDRWDPWMVTQFAAPWFGWVVGWAEPTWWNYRNDTIDEYSKIISLGGFKSKEEFIDLLKKATELSIQE SLRIWIVSTLDTYPARSEVKGVTLDLGAGLRSPFFIRGAYVAGGDGTLKVGHRWVFTARTIWNPFGGFDDVYSVDPARAT YDPGIWRHPFNGEPIAFRTPFTVETAGPEGKLPVPDDAVWWDAENDRWVYAKDLGRIEAVSKVVFDVSKLVGSKWHDGEP ITFADIMAWLAENLDITYDPQKSQIEGAIASTAKEIYEKIVAFRFLPSENKVEVYVDYWHFDPNYIADFAAFTLYNPAPV IFAMDYLAFVKKTYALDETRARKENIPQLNLVLADHAAAIKEALDEISYDAYKGYFTLPDGTVLMTPDEWADRIEKAKAW IDTYGNAWISDGPFKLVKFDKDAQMLELEAFRDPTYPFGPTDWVFGLPAPVTITGIKTPLVPPGKEARIIVTVAGPSPLH VKYVLRDPETNKVIAVGEAEETPGGFLIKLPASLTATLAEYSVYDLTVIAYSESVALPAEQTVSLQTTETAGKIEQVQEN IQKQIEQLRQLLGEQVASAISNAISGVNTQIQDLLKTVQQLPDTLKSSISGLATKDDVATATNKAAAAESKANLALIVSV INLILLLAIAYGVFARRS
Sequences:
>Translated_978_residues MRKLIALILIAVFVLPSLGVAITAQAQGEKGPASDKVIWKQVTLEQVVQALKSGDIDVYLFGLRPAAAQQLVGEKGIELY QAPAGLVDLGLNPAPVMIVELPGKLTKEEAATKLGVDPVVIAYATYVPSGAEEVPPVGVSIEDRDITVVELCAKIPETSV TSAGGKVLWQSDKFDINPFCFKEIRFAMNYLVDRDYIVKNIYKGFAIARYAVYGAGDPTYVEVIDVVAKYKFSYNPTLAK EIVFSVLQKAGAEYRDGVWYYNGKPIQVIGIIRQEDERLDIGKMFADELEKTIGIKVLRQIVPFGEAITKVYASDPKDFE WHFYTEGWGRGAIDRWDPWMVTQFAAPWFGWVVGWAEPTWWNYRNDTIDEYSKIISLGGFKSKEEFIDLLKKATELSIQE SLRIWIVSTLDTYPARSEVKGVTLDLGAGLRSPFFIRGAYVAGGDGTLKVGHRWVFTARTIWNPFGGFDDVYSVDPARAT YDPGIWRHPFNGEPIAFRTPFTVETAGPEGKLPVPDDAVWWDAENDRWVYAKDLGRIEAVSKVVFDVSKLVGSKWHDGEP ITFADIMAWLAENLDITYDPQKSQIEGAIASTAKEIYEKIVAFRFLPSENKVEVYVDYWHFDPNYIADFAAFTLYNPAPV IFAMDYLAFVKKTYALDETRARKENIPQLNLVLADHAAAIKEALDEISYDAYKGYFTLPDGTVLMTPDEWADRIEKAKAW IDTYGNAWISDGPFKLVKFDKDAQMLELEAFRDPTYPFGPTDWVFGLPAPVTITGIKTPLVPPGKEARIIVTVAGPSPLH VKYVLRDPETNKVIAVGEAEETPGGFLIKLPASLTATLAEYSVYDLTVIAYSESVALPAEQTVSLQTTETAGKIEQVQEN IQKQIEQLRQLLGEQVASAISNAISGVNTQIQDLLKTVQQLPDTLKSSISGLATKDDVATATNKAAAAESKANLALIVSV INLILLLAIAYGVFARRS >Mature_978_residues MRKLIALILIAVFVLPSLGVAITAQAQGEKGPASDKVIWKQVTLEQVVQALKSGDIDVYLFGLRPAAAQQLVGEKGIELY QAPAGLVDLGLNPAPVMIVELPGKLTKEEAATKLGVDPVVIAYATYVPSGAEEVPPVGVSIEDRDITVVELCAKIPETSV TSAGGKVLWQSDKFDINPFCFKEIRFAMNYLVDRDYIVKNIYKGFAIARYAVYGAGDPTYVEVIDVVAKYKFSYNPTLAK EIVFSVLQKAGAEYRDGVWYYNGKPIQVIGIIRQEDERLDIGKMFADELEKTIGIKVLRQIVPFGEAITKVYASDPKDFE WHFYTEGWGRGAIDRWDPWMVTQFAAPWFGWVVGWAEPTWWNYRNDTIDEYSKIISLGGFKSKEEFIDLLKKATELSIQE SLRIWIVSTLDTYPARSEVKGVTLDLGAGLRSPFFIRGAYVAGGDGTLKVGHRWVFTARTIWNPFGGFDDVYSVDPARAT YDPGIWRHPFNGEPIAFRTPFTVETAGPEGKLPVPDDAVWWDAENDRWVYAKDLGRIEAVSKVVFDVSKLVGSKWHDGEP ITFADIMAWLAENLDITYDPQKSQIEGAIASTAKEIYEKIVAFRFLPSENKVEVYVDYWHFDPNYIADFAAFTLYNPAPV IFAMDYLAFVKKTYALDETRARKENIPQLNLVLADHAAAIKEALDEISYDAYKGYFTLPDGTVLMTPDEWADRIEKAKAW IDTYGNAWISDGPFKLVKFDKDAQMLELEAFRDPTYPFGPTDWVFGLPAPVTITGIKTPLVPPGKEARIIVTVAGPSPLH VKYVLRDPETNKVIAVGEAEETPGGFLIKLPASLTATLAEYSVYDLTVIAYSESVALPAEQTVSLQTTETAGKIEQVQEN IQKQIEQLRQLLGEQVASAISNAISGVNTQIQDLLKTVQQLPDTLKSSISGLATKDDVATATNKAAAAESKANLALIVSV INLILLLAIAYGVFARRS
Specific function: Unknown
COG id: COG3889
COG function: function code R; Predicted solute binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 108393; Mature: 108393
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLIALILIAVFVLPSLGVAITAQAQGEKGPASDKVIWKQVTLEQVVQALKSGDIDVYL CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE FGLRPAAAQQLVGEKGIELYQAPAGLVDLGLNPAPVMIVELPGKLTKEEAATKLGVDPVV EECCHHHHHHHHHHCCCEEEECCCCCEECCCCCCCEEEEECCCCCCHHHHHHHCCCCCEE IAYATYVPSGAEEVPPVGVSIEDRDITVVELCAKIPETSVTSAGGKVLWQSDKFDINPFC EEEEHHCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHH FKEIRFAMNYLVDRDYIVKNIYKGFAIARYAVYGAGDPTYVEVIDVVAKYKFSYNPTLAK HHHHHHHHHHHHCHHHHHHHHHHHHHEEHEEEECCCCCHHHHHHHHHHHHCCCCCCHHHH EIVFSVLQKAGAEYRDGVWYYNGKPIQVIGIIRQEDERLDIGKMFADELEKTIGIKVLRQ HHHHHHHHHCCCCHHCCEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH IVPFGEAITKVYASDPKDFEWHFYTEGWGRGAIDRWDPWMVTQFAAPWFGWVVGWAEPTW HHCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHEEECCCCCC WNYRNDTIDEYSKIISLGGFKSKEEFIDLLKKATELSIQESLRIWIVSTLDTYPARSEVK CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHCC GVTLDLGAGLRSPFFIRGAYVAGGDGTLKVGHRWVFTARTIWNPFGGFDDVYSVDPARAT CEEEECCCCCCCCEEEEEEEEECCCCEEEECCEEEEEEHHHCCCCCCCCCCCCCCCCCCC YDPGIWRHPFNGEPIAFRTPFTVETAGPEGKLPVPDDAVWWDAENDRWVYAKDLGRIEAV CCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHHH SKVVFDVSKLVGSKWHDGEPITFADIMAWLAENLDITYDPQKSQIEGAIASTAKEIYEKI HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHH VAFRFLPSENKVEVYVDYWHFDPNYIADFAAFTLYNPAPVIFAMDYLAFVKKTYALDETR HHHEECCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ARKENIPQLNLVLADHAAAIKEALDEISYDAYKGYFTLPDGTVLMTPDEWADRIEKAKAW HHHHCCCEEEEEEHHHHHHHHHHHHHCCHHHHCCEEECCCCEEEECCHHHHHHHHHHHHH IDTYGNAWISDGPFKLVKFDKDAQMLELEAFRDPTYPFGPTDWVFGLPAPVTITGIKTPL HHHCCCCEECCCCEEEEEECCCCCEEEHHHHCCCCCCCCCCCCEECCCCCEEEEECCCCC VPPGKEARIIVTVAGPSPLHVKYVLRDPETNKVIAVGEAEETPGGFLIKLPASLTATLAE CCCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHH YSVYDLTVIAYSESVALPAEQTVSLQTTETAGKIEQVQENIQKQIEQLRQLLGEQVASAI CEEEEEEEEEEECCCCCCCHHCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNAISGVNTQIQDLLKTVQQLPDTLKSSISGLATKDDVATATNKAAAAESKANLALIVSV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHCCCCHHHHHHH INLILLLAIAYGVFARRS HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKLIALILIAVFVLPSLGVAITAQAQGEKGPASDKVIWKQVTLEQVVQALKSGDIDVYL CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE FGLRPAAAQQLVGEKGIELYQAPAGLVDLGLNPAPVMIVELPGKLTKEEAATKLGVDPVV EECCHHHHHHHHHHCCCEEEECCCCCEECCCCCCCEEEEECCCCCCHHHHHHHCCCCCEE IAYATYVPSGAEEVPPVGVSIEDRDITVVELCAKIPETSVTSAGGKVLWQSDKFDINPFC EEEEHHCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHH FKEIRFAMNYLVDRDYIVKNIYKGFAIARYAVYGAGDPTYVEVIDVVAKYKFSYNPTLAK HHHHHHHHHHHHCHHHHHHHHHHHHHEEHEEEECCCCCHHHHHHHHHHHHCCCCCCHHHH EIVFSVLQKAGAEYRDGVWYYNGKPIQVIGIIRQEDERLDIGKMFADELEKTIGIKVLRQ HHHHHHHHHCCCCHHCCEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH IVPFGEAITKVYASDPKDFEWHFYTEGWGRGAIDRWDPWMVTQFAAPWFGWVVGWAEPTW HHCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHEEECCCCCC WNYRNDTIDEYSKIISLGGFKSKEEFIDLLKKATELSIQESLRIWIVSTLDTYPARSEVK CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHCC GVTLDLGAGLRSPFFIRGAYVAGGDGTLKVGHRWVFTARTIWNPFGGFDDVYSVDPARAT CEEEECCCCCCCCEEEEEEEEECCCCEEEECCEEEEEEHHHCCCCCCCCCCCCCCCCCCC YDPGIWRHPFNGEPIAFRTPFTVETAGPEGKLPVPDDAVWWDAENDRWVYAKDLGRIEAV CCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHHH SKVVFDVSKLVGSKWHDGEPITFADIMAWLAENLDITYDPQKSQIEGAIASTAKEIYEKI HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHH VAFRFLPSENKVEVYVDYWHFDPNYIADFAAFTLYNPAPVIFAMDYLAFVKKTYALDETR HHHEECCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ARKENIPQLNLVLADHAAAIKEALDEISYDAYKGYFTLPDGTVLMTPDEWADRIEKAKAW HHHHCCCEEEEEEHHHHHHHHHHHHHCCHHHHCCEEECCCCEEEECCHHHHHHHHHHHHH IDTYGNAWISDGPFKLVKFDKDAQMLELEAFRDPTYPFGPTDWVFGLPAPVTITGIKTPL HHHCCCCEECCCCEEEEEECCCCCEEEHHHHCCCCCCCCCCCCEECCCCCEEEEECCCCC VPPGKEARIIVTVAGPSPLHVKYVLRDPETNKVIAVGEAEETPGGFLIKLPASLTATLAE CCCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHH YSVYDLTVIAYSESVALPAEQTVSLQTTETAGKIEQVQENIQKQIEQLRQLLGEQVASAI CEEEEEEEEEEECCCCCCCHHCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNAISGVNTQIQDLLKTVQQLPDTLKSSISGLATKDDVATATNKAAAAESKANLALIVSV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHCCCCHHHHHHH INLILLLAIAYGVFARRS HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA