| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is yleA [C]
Identifier: 124027620
GI number: 124027620
Start: 729455
End: 730816
Strand: Reverse
Name: yleA [C]
Synonym: Hbut_0741
Alternate gene names: 124027620
Gene position: 730816-729455 (Counterclockwise)
Preceding gene: 124027622
Following gene: 124027615
Centisome position: 43.84
GC content: 62.78
Gene sequence:
>1362_bases ATGCCTGCCGACCTAGTGTTTGTCGCTAGGAGCGTCTACGGCGCGCGGAACGCCTTTGCACACCTAGCCTCAGCGCTAGA GGCTGCTGGGCTCCTCGGACGCAGCGTGGACATGGTTCTCGTCGAGGAGGACCCCGCCACTGTTGCTGCGGAGCTTGAGA GGCGTGGGCGCCGGGTGGTGCTGCTCTACGGTCTCTCCAGCCCTGTTTTCCTCGACCTGCTACCAGAGCTAGCCCGCAAC ACTGCGAGATTCACTGTGGTTGTTGGCGGGCCCCACGCTGAGGGCGCCTACTGGCAGCTCCTAAGGATGGGCGTCTACGC AGCCGTCGTGGGTGACGGCGAGAACACGGTAGTGGCGCTTGCCGAGCACTTTCTCGGCGAGAGGAGCCTCGATGATGTGC CAAACATAGCGCTCCGCGATGATGGAAGGTTCCGCATTACGAGGATCGAGCTGGTGGACCTGGACAGTTATATGCCGCAT AGTAGGAGGTATAGGTTGTACCCGCCGATAGAGATTATGAGGGGGTGCCCGTTCCGGTGCCGGTTCTGCCAGGTGCCATG GCTCTTCAAGGCCCGCGTAAGGTACCGTAGCCCCAGTGTTGTGGAGGAGGCTGTGAGGGACTACGTGGCTGCCGGCAAGA AGCATATACGGTTCGTGGCGCCGATAGGTTTCGCCTACATGTCGAGGAGGCCCGGCGAGCCCAACGTGGAGGCGATAGAG GAGCTCCTCACCGCCGTCCGGAGAGCCGGGGGTATACCCTACCTGGGCACCTTCCCTAGCGAGACACGGCCTGAGTACGT GACGCCCGAGGTGCTAGAGGTTGTGAAGCGGCTCGCCGCCAACCGGAGGATAGCCCTGGGGCTCCAGAGCGGTGACAACA GGGTGCTAGAGGTCTCCGACCGCGGTCACACAGTGGAGCAGGTCTTCGAGGCAGTGGAGCTAGTGGTCCGCTATGGGTTC CGCCCCGTGGTGGACATACTGTTCGGCCTACCGGGCGAGGACGAGGAGGCCGTGGAGAAGACTGTGGACGCGATGTACAA GCTAGCAGAGATGGGGGCGCAGCTGAGGCTCCACACCTTCATACCCCTGCCAGGCACCCCCTTCGCCAAGGCGAAGCCGA AACCTGTGCACCCCAGGTACCGTGAGGCGATACGACGCCTCCTAGGCAGAGGCGTGCTGGAGGGCGACTGGGAGGAGCAG GAGCAGATAGCACCGAGGGTCTACTGTACAATAGCTATCGACCCTGCTCCGACACCGGAGCCGAGGCCCCTACCCGAGCA GAGCTACTGCCGGGAGACGTGGACGAAGCTTGCAAACCTAATACCAGCATACCGGGACATAGCGAGGGAGATGGAGGGGT AG
Upstream 100 bases:
>100_bases GCGTAGACGGTGGCAGCTGCTGGGCTACGATACATGCATAGACGGTTGCCGCATAGCCCTCCACTAGCCTGGAGAACTGC TGGGAGGGTGCTGGCCGGGG
Downstream 100 bases:
>100_bases GAGGGTAAAACAGCGCCGTAGGGCCCTACATGCGGGTTTAGGCTGTTGGTGCTGCTAGCGATTCGAGGGCGCGGATGAGG TTCTGCTCTACGCCGCTGTG
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MPADLVFVARSVYGARNAFAHLASALEAAGLLGRSVDMVLVEEDPATVAAELERRGRRVVLLYGLSSPVFLDLLPELARN TARFTVVVGGPHAEGAYWQLLRMGVYAAVVGDGENTVVALAEHFLGERSLDDVPNIALRDDGRFRITRIELVDLDSYMPH SRRYRLYPPIEIMRGCPFRCRFCQVPWLFKARVRYRSPSVVEEAVRDYVAAGKKHIRFVAPIGFAYMSRRPGEPNVEAIE ELLTAVRRAGGIPYLGTFPSETRPEYVTPEVLEVVKRLAANRRIALGLQSGDNRVLEVSDRGHTVEQVFEAVELVVRYGF RPVVDILFGLPGEDEEAVEKTVDAMYKLAEMGAQLRLHTFIPLPGTPFAKAKPKPVHPRYREAIRRLLGRGVLEGDWEEQ EQIAPRVYCTIAIDPAPTPEPRPLPEQSYCRETWTKLANLIPAYRDIAREMEG
Sequences:
>Translated_453_residues MPADLVFVARSVYGARNAFAHLASALEAAGLLGRSVDMVLVEEDPATVAAELERRGRRVVLLYGLSSPVFLDLLPELARN TARFTVVVGGPHAEGAYWQLLRMGVYAAVVGDGENTVVALAEHFLGERSLDDVPNIALRDDGRFRITRIELVDLDSYMPH SRRYRLYPPIEIMRGCPFRCRFCQVPWLFKARVRYRSPSVVEEAVRDYVAAGKKHIRFVAPIGFAYMSRRPGEPNVEAIE ELLTAVRRAGGIPYLGTFPSETRPEYVTPEVLEVVKRLAANRRIALGLQSGDNRVLEVSDRGHTVEQVFEAVELVVRYGF RPVVDILFGLPGEDEEAVEKTVDAMYKLAEMGAQLRLHTFIPLPGTPFAKAKPKPVHPRYREAIRRLLGRGVLEGDWEEQ EQIAPRVYCTIAIDPAPTPEPRPLPEQSYCRETWTKLANLIPAYRDIAREMEG >Mature_452_residues PADLVFVARSVYGARNAFAHLASALEAAGLLGRSVDMVLVEEDPATVAAELERRGRRVVLLYGLSSPVFLDLLPELARNT ARFTVVVGGPHAEGAYWQLLRMGVYAAVVGDGENTVVALAEHFLGERSLDDVPNIALRDDGRFRITRIELVDLDSYMPHS RRYRLYPPIEIMRGCPFRCRFCQVPWLFKARVRYRSPSVVEEAVRDYVAAGKKHIRFVAPIGFAYMSRRPGEPNVEAIEE LLTAVRRAGGIPYLGTFPSETRPEYVTPEVLEVVKRLAANRRIALGLQSGDNRVLEVSDRGHTVEQVFEAVELVVRYGFR PVVDILFGLPGEDEEAVEKTVDAMYKLAEMGAQLRLHTFIPLPGTPFAKAKPKPVHPRYREAIRRLLGRGVLEGDWEEQE QIAPRVYCTIAIDPAPTPEPRPLPEQSYCRETWTKLANLIPAYRDIAREMEG
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 50843; Mature: 50712
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS01305 MOAA_NIFB_PQQE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADLVFVARSVYGARNAFAHLASALEAAGLLGRSVDMVLVEEDPATVAAELERRGRRVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEE LLYGLSSPVFLDLLPELARNTARFTVVVGGPHAEGAYWQLLRMGVYAAVVGDGENTVVAL EEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHEEEEECCCCHHHHH AEHFLGERSLDDVPNIALRDDGRFRITRIELVDLDSYMPHSRRYRLYPPIEIMRGCPFRC HHHHHCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCEEECCCHHHHCCCCCEE RFCQVPWLFKARVRYRSPSVVEEAVRDYVAAGKKHIRFVAPIGFAYMSRRPGEPNVEAIE EEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEEEECCHHHHHHHCCCCCCCHHHHH ELLTAVRRAGGIPYLGTFPSETRPEYVTPEVLEVVKRLAANRRIALGLQSGDNRVLEVSD HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEECC RGHTVEQVFEAVELVVRYGFRPVVDILFGLPGEDEEAVEKTVDAMYKLAEMGAQLRLHTF CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE IPLPGTPFAKAKPKPVHPRYREAIRRLLGRGVLEGDWEEQEQIAPRVYCTIAIDPAPTPE ECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEEEECCCCCCC PRPLPEQSYCRETWTKLANLIPAYRDIAREMEG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PADLVFVARSVYGARNAFAHLASALEAAGLLGRSVDMVLVEEDPATVAAELERRGRRVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEE LLYGLSSPVFLDLLPELARNTARFTVVVGGPHAEGAYWQLLRMGVYAAVVGDGENTVVAL EEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHEEEEECCCCHHHHH AEHFLGERSLDDVPNIALRDDGRFRITRIELVDLDSYMPHSRRYRLYPPIEIMRGCPFRC HHHHHCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCEEECCCHHHHCCCCCEE RFCQVPWLFKARVRYRSPSVVEEAVRDYVAAGKKHIRFVAPIGFAYMSRRPGEPNVEAIE EEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEEEECCHHHHHHHCCCCCCCHHHHH ELLTAVRRAGGIPYLGTFPSETRPEYVTPEVLEVVKRLAANRRIALGLQSGDNRVLEVSD HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEECC RGHTVEQVFEAVELVVRYGFRPVVDILFGLPGEDEEAVEKTVDAMYKLAEMGAQLRLHTF CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE IPLPGTPFAKAKPKPVHPRYREAIRRLLGRGVLEGDWEEQEQIAPRVYCTIAIDPAPTPE ECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEEEECCCCCCC PRPLPEQSYCRETWTKLANLIPAYRDIAREMEG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]