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The map label for this gene is ybbK [C]

Identifier: 124027618

GI number: 124027618

Start: 727720

End: 728154

Strand: Direct

Name: ybbK [C]

Synonym: Hbut_0739

Alternate gene names: 124027618

Gene position: 727720-728154 (Clockwise)

Preceding gene: 124027617

Following gene: 124027619

Centisome position: 43.65

GC content: 59.08

Gene sequence:

>435_bases
ATGGAGCTAGACGAGATACCCTACAACCGCGCTGCAATAAACGCTAAGCTCCGCAGCATACTCGACGAGGCCACGGATAA
GTGGGGCGTCCGGGCCGAGAGCATCGAGATAAGAGAGGTTGAGCCAAGCCCCACGGTTAAGAAGGCTATGGAGGAGCAGA
CGGCAGCGGAGAGGGAGAGAAGGGCAGCAATACTCAGCGCTGAGGGCGAGAGGATGGCCATGATACTCCGAGCGCTAGGC
GAAGCCCAGAGGCTGAGGATACTAGCAGCTGGAGCATCAGCACTACACCCAGCCGCAGTAACGGTCCTCGGCCTAGAGAC
GCTAGCCAAGCTAGCAGACACACCATCAACAAAGCTGGTCCTACCATACGAGCTAACCCGCCTAGCTGAGGCAGTAGCAG
CACACCTGGGTGCTGCAGCAGCCCAGCCACCATAG

Upstream 100 bases:

>100_bases
CCGCGTCATAGACCCGAAGAAGGCCTTCTTCGAGATCGAAGACTACCGGACCGCAGTTGTCGCGCCGGCGCAGACAACGC
TGCGAAGCGTAATAGGCGAC

Downstream 100 bases:

>100_bases
CTCGTCGAGCTCGAGAAGCTGGAGGAGATAAACAAGAAGCTCGAAGAGCTACTAGGCAAGCTCCCAAGCATAGAGGAGGT
AACAAAGGGGATCCAGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MELDEIPYNRAAINAKLRSILDEATDKWGVRAESIEIREVEPSPTVKKAMEEQTAAERERRAAILSAEGERMAMILRALG
EAQRLRILAAGASALHPAAVTVLGLETLAKLADTPSTKLVLPYELTRLAEAVAAHLGAAAAQPP

Sequences:

>Translated_144_residues
MELDEIPYNRAAINAKLRSILDEATDKWGVRAESIEIREVEPSPTVKKAMEEQTAAERERRAAILSAEGERMAMILRALG
EAQRLRILAAGASALHPAAVTVLGLETLAKLADTPSTKLVLPYELTRLAEAVAAHLGAAAAQPP
>Mature_144_residues
MELDEIPYNRAAINAKLRSILDEATDKWGVRAESIEIREVEPSPTVKKAMEEQTAAERERRAAILSAEGERMAMILRALG
EAQRLRILAAGASALHPAAVTVLGLETLAKLADTPSTKLVLPYELTRLAEAVAAHLGAAAAQPP

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Escherichia coli, GI1786697, Length=83, Percent_Identity=50.6024096385542, Blast_Score=80, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 15460; Mature: 15460

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDEIPYNRAAINAKLRSILDEATDKWGVRAESIEIREVEPSPTVKKAMEEQTAAERER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEECCCCHHHHHHHHHHHHHHHHH
RAAILSAEGERMAMILRALGEAQRLRILAAGASALHPAAVTVLGLETLAKLADTPSTKLV
HHHHHCCCCHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE
LPYELTRLAEAVAAHLGAAAAQPP
EHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MELDEIPYNRAAINAKLRSILDEATDKWGVRAESIEIREVEPSPTVKKAMEEQTAAERER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEECCCCHHHHHHHHHHHHHHHHH
RAAILSAEGERMAMILRALGEAQRLRILAAGASALHPAAVTVLGLETLAKLADTPSTKLV
HHHHHCCCCHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE
LPYELTRLAEAVAAHLGAAAAQPP
EHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]