Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
---|---|
Accession | NC_008818 |
Length | 1,667,163 |
Click here to switch to the map view.
The map label for this gene is 124027592
Identifier: 124027592
GI number: 124027592
Start: 693301
End: 695013
Strand: Direct
Name: 124027592
Synonym: Hbut_0712
Alternate gene names: NA
Gene position: 693301-695013 (Clockwise)
Preceding gene: 124027591
Following gene: 124027593
Centisome position: 41.59
GC content: 51.31
Gene sequence:
>1713_bases ATGCCCAGCTTCATAAGACCAAAGCCCCTCGCTACACTCAGCTTTGTGAGCTTTACACCTTTATGGCCTGGAGGCCCCCT CGGAGGCCGCACCTACCGGTGTATTACCAGGAGATACTGTATCGGCCCCTTCCTCCCCGACTCCAAGCAGGTTATCGGGA GGGTCAGATGGCTCCTTAGAACCGTTGAGGCTACCCTCCAGGTGTTGACTGGGAAGCCAGTTAACTCCTACGCAGATGTC GAGTCGTTGAATGCTAGGATATTCGGGACCACAAGCACAGCCTCGAAGCTACGCATAGTCCTATCATACTCGCCCAACAG CGTGAGAAGCTACTTTGATGCCAGCACCGTGCAGGCCTTGGAAGAGGCTGCCAGGAGAGCGAGTCTAAATGCCAAGAGTA TAGTGCAGCTCATAGAGGTTGACGGTTTTACAAGGCTGAGACACAAGCTGAATCTGCCACCTTTTGAGAGGAGAATATGG TCAGACTACGAGCGTTATCTAAAGGTGACAAGGAATGGGTCATTAGTACCCGATGAGTTGGCTCTACTCCTTACAATTCC GCGTATACGGCTTACACTACAGGGTATAAAAAAGTTCATTGACATATACGAGATGCAGCCTTTACGAGAAGGAATCGAAC TAACTGTAACCATCTATGCCCGTAAAGGAGCTAATGTCGATTCTCTCGAGGCTAGCTTTGCAGTACTCGTTATAGTGTTC ACTCTAGCCTTCATAGGCTTGGGTAAGGCAACATCAAGAGGTTTTGGAAGGTTTGCCCTTAAGAAGTACGAGATTAATGT CAATAATAAAGACCTTGTTGATGATGTGCTTGAAAGCTTTACAAAAGTAGTGAACTCTGTTGAGGATATGAAGAGTGTCT ACATGGAGGCTGGCAAGACCCTTCTAATGCTCGCTCGGGAGTTGAAAGGGGTACCTGTGCCCTCATCGAAGATCGATGAC GTGGCTGGAGAGGATGGATGGCATAAGGCGGTTCAGCTGGTTAGGAGGAGTAGAGTGCCCCTCTTCGCTACGAGTATAGC CTACGTAGCGCTTAAGGGAGCTATAGGGAGGATAAAGCATCCCTGCCCCTACGCAACAGCAGAGCTAGGCGGCCGGATTG AAAGCCGTCCCCATGGCTGCATAGATAATACTGTAGAGGTAGGTGATATTATAACTGCTCTAAGTGCTGTAGGGAAAGCC ACACTTAAATCGACATGGAAGTTGTATCATGGCCCACAGCAGCTCAGGAGGGAAGGGGTTGCATATCATACTTGGCCTCT AGGTCTACCGCGAGGAGCCCAAAACACAGGGTATTATATTGCTGAGCACGCTTATACAGGTGAAAGGTGCGGCCCCAATC TAGGCAGGATTGCCAAGTTGAATAAATCCTCGAGGAGGCTTTCAACAGTATTCTTCACAGTAGCCTGCAGCGGCGGGGAA TGCTTCGGACTTGTGCAGCCCTTCCTCTCCTACGAAGACTTTGCCGACGCTATGACCAGGCTTGTGCATGTAGGCAAGCA TGACAAAACACTATATCACGTGGTCAGCGTTGCCCAGGCCTTGCAGCAGAGCAGGCTGGGCCATGGGGGATGCCCGCCGG ACCCTGCGGGGCTTGCAGCCCCAAGGGACACCCCAGGCGCACGTACTGCCTCCGATGTTGTTCTCGAGCCTCTTCTCACG GCTCTCGACTGGATTGTCACGCTGTTAGGGTGA
Upstream 100 bases:
>100_bases AGGGTGTCACTGTGGAGAAGCTTGTGCAGGCCTACGTTAACGAGCTGAAGAAGCTAGCGTCGGCACTATACCCGGAGAAG AAAACATGAGGTGCTCTGCA
Downstream 100 bases:
>100_bases GGGGGATGGTTGAGACGGCGCCCTGTAGGAATATGATGCTGTGTATCGCTTGGAAGTTCAGCAAGCTTGTACTGGACACA TTGAGTAGGGGTAGGGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MPSFIRPKPLATLSFVSFTPLWPGGPLGGRTYRCITRRYCIGPFLPDSKQVIGRVRWLLRTVEATLQVLTGKPVNSYADV ESLNARIFGTTSTASKLRIVLSYSPNSVRSYFDASTVQALEEAARRASLNAKSIVQLIEVDGFTRLRHKLNLPPFERRIW SDYERYLKVTRNGSLVPDELALLLTIPRIRLTLQGIKKFIDIYEMQPLREGIELTVTIYARKGANVDSLEASFAVLVIVF TLAFIGLGKATSRGFGRFALKKYEINVNNKDLVDDVLESFTKVVNSVEDMKSVYMEAGKTLLMLARELKGVPVPSSKIDD VAGEDGWHKAVQLVRRSRVPLFATSIAYVALKGAIGRIKHPCPYATAELGGRIESRPHGCIDNTVEVGDIITALSAVGKA TLKSTWKLYHGPQQLRREGVAYHTWPLGLPRGAQNTGYYIAEHAYTGERCGPNLGRIAKLNKSSRRLSTVFFTVACSGGE CFGLVQPFLSYEDFADAMTRLVHVGKHDKTLYHVVSVAQALQQSRLGHGGCPPDPAGLAAPRDTPGARTASDVVLEPLLT ALDWIVTLLG
Sequences:
>Translated_570_residues MPSFIRPKPLATLSFVSFTPLWPGGPLGGRTYRCITRRYCIGPFLPDSKQVIGRVRWLLRTVEATLQVLTGKPVNSYADV ESLNARIFGTTSTASKLRIVLSYSPNSVRSYFDASTVQALEEAARRASLNAKSIVQLIEVDGFTRLRHKLNLPPFERRIW SDYERYLKVTRNGSLVPDELALLLTIPRIRLTLQGIKKFIDIYEMQPLREGIELTVTIYARKGANVDSLEASFAVLVIVF TLAFIGLGKATSRGFGRFALKKYEINVNNKDLVDDVLESFTKVVNSVEDMKSVYMEAGKTLLMLARELKGVPVPSSKIDD VAGEDGWHKAVQLVRRSRVPLFATSIAYVALKGAIGRIKHPCPYATAELGGRIESRPHGCIDNTVEVGDIITALSAVGKA TLKSTWKLYHGPQQLRREGVAYHTWPLGLPRGAQNTGYYIAEHAYTGERCGPNLGRIAKLNKSSRRLSTVFFTVACSGGE CFGLVQPFLSYEDFADAMTRLVHVGKHDKTLYHVVSVAQALQQSRLGHGGCPPDPAGLAAPRDTPGARTASDVVLEPLLT ALDWIVTLLG >Mature_569_residues PSFIRPKPLATLSFVSFTPLWPGGPLGGRTYRCITRRYCIGPFLPDSKQVIGRVRWLLRTVEATLQVLTGKPVNSYADVE SLNARIFGTTSTASKLRIVLSYSPNSVRSYFDASTVQALEEAARRASLNAKSIVQLIEVDGFTRLRHKLNLPPFERRIWS DYERYLKVTRNGSLVPDELALLLTIPRIRLTLQGIKKFIDIYEMQPLREGIELTVTIYARKGANVDSLEASFAVLVIVFT LAFIGLGKATSRGFGRFALKKYEINVNNKDLVDDVLESFTKVVNSVEDMKSVYMEAGKTLLMLARELKGVPVPSSKIDDV AGEDGWHKAVQLVRRSRVPLFATSIAYVALKGAIGRIKHPCPYATAELGGRIESRPHGCIDNTVEVGDIITALSAVGKAT LKSTWKLYHGPQQLRREGVAYHTWPLGLPRGAQNTGYYIAEHAYTGERCGPNLGRIAKLNKSSRRLSTVFFTVACSGGEC FGLVQPFLSYEDFADAMTRLVHVGKHDKTLYHVVSVAQALQQSRLGHGGCPPDPAGLAAPRDTPGARTASDVVLEPLLTA LDWIVTLLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62787; Mature: 62656
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFIRPKPLATLSFVSFTPLWPGGPLGGRTYRCITRRYCIGPFLPDSKQVIGRVRWLLR CCCCCCCCCCCEEEHHEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TVEATLQVLTGKPVNSYADVESLNARIFGTTSTASKLRIVLSYSPNSVRSYFDASTVQAL HHHHHHHHHCCCCCCCHHHHHHCCEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHH EEAARRASLNAKSIVQLIEVDGFTRLRHKLNLPPFERRIWSDYERYLKVTRNGSLVPDEL HHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH ALLLTIPRIRLTLQGIKKFIDIYEMQPLREGIELTVTIYARKGANVDSLEASFAVLVIVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH TLAFIGLGKATSRGFGRFALKKYEINVNNKDLVDDVLESFTKVVNSVEDMKSVYMEAGKT HHHHHHCCCHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH LLMLARELKGVPVPSSKIDDVAGEDGWHKAVQLVRRSRVPLFATSIAYVALKGAIGRIKH HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PCPYATAELGGRIESRPHGCIDNTVEVGDIITALSAVGKATLKSTWKLYHGPQQLRREGV CCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC AYHTWPLGLPRGAQNTGYYIAEHAYTGERCGPNLGRIAKLNKSSRRLSTVFFTVACSGGE EEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCHHHEEEEEEEEEECCCC CFGLVQPFLSYEDFADAMTRLVHVGKHDKTLYHVVSVAQALQQSRLGHGGCPPDPAGLAA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PRDTPGARTASDVVLEPLLTALDWIVTLLG CCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSFIRPKPLATLSFVSFTPLWPGGPLGGRTYRCITRRYCIGPFLPDSKQVIGRVRWLLR CCCCCCCCCCEEEHHEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH TVEATLQVLTGKPVNSYADVESLNARIFGTTSTASKLRIVLSYSPNSVRSYFDASTVQAL HHHHHHHHHCCCCCCCHHHHHHCCEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHH EEAARRASLNAKSIVQLIEVDGFTRLRHKLNLPPFERRIWSDYERYLKVTRNGSLVPDEL HHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH ALLLTIPRIRLTLQGIKKFIDIYEMQPLREGIELTVTIYARKGANVDSLEASFAVLVIVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHH TLAFIGLGKATSRGFGRFALKKYEINVNNKDLVDDVLESFTKVVNSVEDMKSVYMEAGKT HHHHHHCCCHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH LLMLARELKGVPVPSSKIDDVAGEDGWHKAVQLVRRSRVPLFATSIAYVALKGAIGRIKH HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PCPYATAELGGRIESRPHGCIDNTVEVGDIITALSAVGKATLKSTWKLYHGPQQLRREGV CCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC AYHTWPLGLPRGAQNTGYYIAEHAYTGERCGPNLGRIAKLNKSSRRLSTVFFTVACSGGE EEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCHHHEEEEEEEEEECCCC CFGLVQPFLSYEDFADAMTRLVHVGKHDKTLYHVVSVAQALQQSRLGHGGCPPDPAGLAA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PRDTPGARTASDVVLEPLLTALDWIVTLLG CCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA