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The map label for this gene is 124027546

Identifier: 124027546

GI number: 124027546

Start: 648854

End: 649300

Strand: Direct

Name: 124027546

Synonym: Hbut_0665

Alternate gene names: NA

Gene position: 648854-649300 (Clockwise)

Preceding gene: 124027545

Following gene: 124027548

Centisome position: 38.92

GC content: 55.48

Gene sequence:

>447_bases
TTGAGGACGTGGAAGAGGATATCGATAAGGTGCTATACGGTGAGCTTACTGGTTGACACTGGTGTCATATTAGCTGCGCT
AGCGAGAAGAGAGAAGAGGCACAGCTGGACCAAAAGGCTAATGGTCGATATACTCGCTGGCCGCTACGGCGTCCCCTTCG
TCACAGACTATATCGTCGACGAGGTGCTCAGCTACGCCGCTGCCCGTCTCACCCCGGAGGATGCTAGGAAGCTTCTTGAC
CTCCTCGTCCACCGCCAGGTGTTCCGCATAATACCATTAACGCTTGACGTGTTCAACCGCGCCGTAAAGCTCTACGAGCA
AGCCCTGCCCAGGCTCAGCTTCACCGACGCAACAGCGGTGGTGGCGGCAAAGCTATACGATGTAGACTACATCGCCACAA
TGGATGAGAGGCTAGCAGACATGCACCCCAGCCTCTACCCGCAATAA

Upstream 100 bases:

>100_bases
AGGATGCGGGATGAGCTGCTCCGCGAGCTGGGAGCCTGGGAGCCGCTCAGCCGGGATGAGGCCGAAAAGCTGCTAGACAT
GTACAGCATAGATCTCCCCG

Downstream 100 bases:

>100_bases
GGCATACACAAGCCCGCTATACACAGGCTCGCCACAACCAGGTATTGGTGCCGTCCACCCGGCGGCCAAGCATACAACAC
ATATGGCCAAGAGCAGCATA

Product: nucleic acid binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRTWKRISIRCYTVSLLVDTGVILAALARREKRHSWTKRLMVDILAGRYGVPFVTDYIVDEVLSYAAARLTPEDARKLLD
LLVHRQVFRIIPLTLDVFNRAVKLYEQALPRLSFTDATAVVAAKLYDVDYIATMDERLADMHPSLYPQ

Sequences:

>Translated_148_residues
MRTWKRISIRCYTVSLLVDTGVILAALARREKRHSWTKRLMVDILAGRYGVPFVTDYIVDEVLSYAAARLTPEDARKLLD
LLVHRQVFRIIPLTLDVFNRAVKLYEQALPRLSFTDATAVVAAKLYDVDYIATMDERLADMHPSLYPQ
>Mature_148_residues
MRTWKRISIRCYTVSLLVDTGVILAALARREKRHSWTKRLMVDILAGRYGVPFVTDYIVDEVLSYAAARLTPEDARKLLD
LLVHRQVFRIIPLTLDVFNRAVKLYEQALPRLSFTDATAVVAAKLYDVDYIATMDERLADMHPSLYPQ

Specific function: Unknown

COG id: COG2402

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17041; Mature: 17041

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTWKRISIRCYTVSLLVDTGVILAALARREKRHSWTKRLMVDILAGRYGVPFVTDYIVD
CCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
EVLSYAAARLTPEDARKLLDLLVHRQVFRIIPLTLDVFNRAVKLYEQALPRLSFTDATAV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
VAAKLYDVDYIATMDERLADMHPSLYPQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRTWKRISIRCYTVSLLVDTGVILAALARREKRHSWTKRLMVDILAGRYGVPFVTDYIVD
CCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
EVLSYAAARLTPEDARKLLDLLVHRQVFRIIPLTLDVFNRAVKLYEQALPRLSFTDATAV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
VAAKLYDVDYIATMDERLADMHPSLYPQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA