Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968921
Identifier: 123968921
GI number: 123968921
Start: 1155157
End: 1155894
Strand: Reverse
Name: 123968921
Synonym: A9601_13881
Alternate gene names: NA
Gene position: 1155894-1155157 (Counterclockwise)
Preceding gene: 123968923
Following gene: 123968918
Centisome position: 69.22
GC content: 26.96
Gene sequence:
>738_bases TTGTTCGAATTGAATAAAAATCGCATAAGATTAATTATTGTTGTACTTTTAACCTTGGCAAGAAGACTTACTGAAAAACA AAAAGAAGAAATAGTAAAAAGGTTTGAATCAGGTACTTCTATTGATCTTTTGTCAAAAAAATATGCCTGCACAATCTCAA CAATTACAAGGAATTTGAAAAAAAAACTTGGAGAATTAAAATTTCATGAGTTGTTCACCAAAAGTAAATTATTGAAGGAA AAATCTAAAACCAATAAAAATCAAACAAATAATTTAGTTAAAAAATGTTCTGCTCATGAAAATTTTAGAAATGATGCAAA TGATCCAAAAGTTTTTAATGAAAATATAACTACTTCAAATTTTGCGCCAATTGATTCATTTTTTGAAATTGCTCCTTTAG ATTACGAGATAGATAATTCATCTCGAAAAGAACTGTCTTCAGTTCCTTTATCAGAGGTAGATTTCCCTAAAATTGTTTAT ATGGTAGTGGATAAGAAAATTGAGTTAGTGATTAAATTATTAAAAGATTTTCCAGAATGGCAATTTTTACCTCAAGATGA TTTGAGTAGAAAAACGATAGAAATATTTTTTGATATAAATCTTGCAAAAAGATCTTGTAATAAAGAGCAAAAGGTACTTA AAGTACCAAATACTGATGTATTTAGAATCGTATCACCTGTTCTTATTTCTAAAGGCATTTCAAGAATAGTTTGCGCTGAA AATCTAATAGCTCTTTGA
Upstream 100 bases:
>100_bases CCAGCTGAGCTAAGGAAGCATCTTATTATTATATCTGACACCATAAGCCTAAACAAACTAAATAAATTCTTTTTAAGATT TTCAGTAAAAATATTTTGTT
Downstream 100 bases:
>100_bases GCTGTTTTTATTTATTATTTATATTTAAATCAATAAAGCTTCCTAAAATAGAACCTAATATAAAACTAGACCCAATTAAA AAACTTATTGGGAGTTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MFELNKNRIRLIIVVLLTLARRLTEKQKEEIVKRFESGTSIDLLSKKYACTISTITRNLKKKLGELKFHELFTKSKLLKE KSKTNKNQTNNLVKKCSAHENFRNDANDPKVFNENITTSNFAPIDSFFEIAPLDYEIDNSSRKELSSVPLSEVDFPKIVY MVVDKKIELVIKLLKDFPEWQFLPQDDLSRKTIEIFFDINLAKRSCNKEQKVLKVPNTDVFRIVSPVLISKGISRIVCAE NLIAL
Sequences:
>Translated_245_residues MFELNKNRIRLIIVVLLTLARRLTEKQKEEIVKRFESGTSIDLLSKKYACTISTITRNLKKKLGELKFHELFTKSKLLKE KSKTNKNQTNNLVKKCSAHENFRNDANDPKVFNENITTSNFAPIDSFFEIAPLDYEIDNSSRKELSSVPLSEVDFPKIVY MVVDKKIELVIKLLKDFPEWQFLPQDDLSRKTIEIFFDINLAKRSCNKEQKVLKVPNTDVFRIVSPVLISKGISRIVCAE NLIAL >Mature_245_residues MFELNKNRIRLIIVVLLTLARRLTEKQKEEIVKRFESGTSIDLLSKKYACTISTITRNLKKKLGELKFHELFTKSKLLKE KSKTNKNQTNNLVKKCSAHENFRNDANDPKVFNENITTSNFAPIDSFFEIAPLDYEIDNSSRKELSSVPLSEVDFPKIVY MVVDKKIELVIKLLKDFPEWQFLPQDDLSRKTIEIFFDINLAKRSCNKEQKVLKVPNTDVFRIVSPVLISKGISRIVCAE NLIAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28339; Mature: 28339
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFELNKNRIRLIIVVLLTLARRLTEKQKEEIVKRFESGTSIDLLSKKYACTISTITRNLK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KKLGELKFHELFTKSKLLKEKSKTNKNQTNNLVKKCSAHENFRNDANDPKVFNENITTSN HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCC FAPIDSFFEIAPLDYEIDNSSRKELSSVPLSEVDFPKIVYMVVDKKIELVIKLLKDFPEW CCCHHHHHHHCCCCEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC QFLPQDDLSRKTIEIFFDINLAKRSCNKEQKVLKVPNTDVFRIVSPVLISKGISRIVCAE CCCCCCCCCCCEEEEEEEEEHHHHHCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHH NLIAL HHHCC >Mature Secondary Structure MFELNKNRIRLIIVVLLTLARRLTEKQKEEIVKRFESGTSIDLLSKKYACTISTITRNLK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KKLGELKFHELFTKSKLLKEKSKTNKNQTNNLVKKCSAHENFRNDANDPKVFNENITTSN HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCC FAPIDSFFEIAPLDYEIDNSSRKELSSVPLSEVDFPKIVYMVVDKKIELVIKLLKDFPEW CCCHHHHHHHCCCCEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC QFLPQDDLSRKTIEIFFDINLAKRSCNKEQKVLKVPNTDVFRIVSPVLISKGISRIVCAE CCCCCCCCCCCEEEEEEEEEHHHHHCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHH NLIAL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA