Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is petM
Identifier: 123968862
GI number: 123968862
Start: 1105574
End: 1105672
Strand: Reverse
Name: petM
Synonym: A9601_13291
Alternate gene names: NA
Gene position: 1105672-1105574 (Counterclockwise)
Preceding gene: 123968865
Following gene: 123968861
Centisome position: 66.21
GC content: 34.34
Gene sequence:
>99_bases ATGGCTAAAGAAATTTTTAGTATTGCAGCAGTTTTTTGGATACTGATACCAATAGGATTAGTAGGTGGTGCTTTGTTATT AAAGTTTCAGGGAGACTGA
Upstream 100 bases:
>100_bases ATCCATATATTCAAAAAATTTTCAAGATATTTGAATTATCTACATTTTTAACAAATAAATGTATTTTGAATGTAAATTAT AGTAATCATTCAATTTTACT
Downstream 100 bases:
>100_bases TTCTCACGGATACATCACAATTTGAGTTATGGTCTTAAAGTTAAGTAAATCTTAAGTATGAAGATTCTTTTAGTAGGAGC AACAGGGACACTTGGTAGAC
Product: cytochrome b6-f complex subunit PetM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 32; Mature: 31
Protein sequence:
>32_residues MAKEIFSIAAVFWILIPIGLVGGALLLKFQGD
Sequences:
>Translated_32_residues MAKEIFSIAAVFWILIPIGLVGGALLLKFQGD >Mature_31_residues AKEIFSIAAVFWILIPIGLVGGALLLKFQGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3432; Mature: 3301
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKEIFSIAAVFWILIPIGLVGGALLLKFQGD CCHHHHHHHHHHHHHHHHHHHHHHHEEEECCC >Mature Secondary Structure AKEIFSIAAVFWILIPIGLVGGALLLKFQGD CHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA