Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968780
Identifier: 123968780
GI number: 123968780
Start: 1056520
End: 1056732
Strand: Reverse
Name: 123968780
Synonym: A9601_12471
Alternate gene names: NA
Gene position: 1056732-1056520 (Counterclockwise)
Preceding gene: 123968781
Following gene: 123968776
Centisome position: 63.28
GC content: 31.92
Gene sequence:
>213_bases TTGAAACACTTTATTTCTTTTCTTCCTTTTTTTTTCATGTCAATTCTTTCGTTAAGTTGTTCAAATAAACCCGCCGAAAA AGAAATGAAAATGCCAATGTTATTTGATACAAAAGAACAGGCTGAAAAAGAAGCTTATAAATTTGACTGTGAAGGCGCTC ATCAAATGGGAGATAAATGGATGCCATGCAGTAAGCATGAACATAATCATTAA
Upstream 100 bases:
>100_bases TAGATCGACTGTCAATCAATAAATATATGTAAAGAATTCAATTTTTTAAATATTTCGAAAGATATTTAATACTATGCTGC CTTGATTTTATAAATAAATT
Downstream 100 bases:
>100_bases AAAAAGAGGGTTTTATCTCTCCAATTTTAGATCGACTATCAAGCTATTAATAATTAATTAATTTTCTTTTTCCATCTCTA TTTTCTACTCTATTTATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MKHFISFLPFFFMSILSLSCSNKPAEKEMKMPMLFDTKEQAEKEAYKFDCEGAHQMGDKWMPCSKHEHNH
Sequences:
>Translated_70_residues MKHFISFLPFFFMSILSLSCSNKPAEKEMKMPMLFDTKEQAEKEAYKFDCEGAHQMGDKWMPCSKHEHNH >Mature_70_residues MKHFISFLPFFFMSILSLSCSNKPAEKEMKMPMLFDTKEQAEKEAYKFDCEGAHQMGDKWMPCSKHEHNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8288; Mature: 8288
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 10.0 %Met (Translated Protein) 14.3 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 10.0 %Met (Mature Protein) 14.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHFISFLPFFFMSILSLSCSNKPAEKEMKMPMLFDTKEQAEKEAYKFDCEGAHQMGDKW CHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCC MPCSKHEHNH CCCCCCCCCC >Mature Secondary Structure MKHFISFLPFFFMSILSLSCSNKPAEKEMKMPMLFDTKEQAEKEAYKFDCEGAHQMGDKW CHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCC MPCSKHEHNH CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA