Definition | Prochlorococcus marinus str. AS9601, complete genome. |
---|---|
Accession | NC_008816 |
Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is phnE [H]
Identifier: 123968261
GI number: 123968261
Start: 644726
End: 645856
Strand: Reverse
Name: phnE [H]
Synonym: A9601_07261
Alternate gene names: 123968261
Gene position: 645856-644726 (Counterclockwise)
Preceding gene: 123968262
Following gene: 123968260
Centisome position: 38.68
GC content: 25.91
Gene sequence:
>1131_bases ATGCAAATATATGGAATAAATTTTTCGATAGGAATAATATCTATATGTATACCTTATATTGCTGTAAATTCAAAAGTATT TGCTGAACAATTAGAAACTATTGACTACAAAAGTTTTGAATCTATAAATCAAATAAATACACCTAAATTTTCTTCTTTAA TAACTTTAATATGGAATCCAATAATAAATACATTTAAAAACTTTGGTTTATATCGATTAGAGTGTTCAATAAGAAGTACT GTGATTTTAGGACTTTTTGGGATTGGAGGAATAGGTACCAGTATTTTTTTATCTTTCCAAACTTTGAATTTTAAAGAGTT ATGGACTTATTTATGGTCATTAGCAATTTTGATAATTCTTTCTGGATTAATATTCAAAAAAATAAAATTTAATACCACAA ATAAAATCCTATCTATTTTTTTTATTGCGGGTTTTTTCATAACAATTTTATTTTCTTTTTCATATTTTCTTTATTTTATT TTTAATAATAATTTTGAAAATTTTAATTCCGTTAGTTCTCTTTTTAAATCAAGCTCAGATTTAGGATTATTTTATTTCTT AAAACTTATATTAGAAACAATAATTTTAAGTCTTTTATCAACAGGAATCGCAATTAGTTTACCTCCATTAGTAATAGGAA TTTTTAACAACAATAGTTCTAAAATTTTTATAAAAATTTTTGCATTTTTATTACGTTTAATACCTACACCTGTAATACTT CTAACTCTATTAACTTTTAATAATCCTTCTTTATCTTTAGCAGCTTTAACATTAGGTCTCCACAACGCTGGTATTACTAG CAAATTACTTTATACAAATCTAGATAGCCAAGACAAGAGAAATTATATTGCAATGAAATCTCTAGGAATCTCAAAAAAGA CTAGTTGGCTTTTAGGTTTATTTTCTCAACAAGCAAAAAGTTACTTAGCATATTGCGCTTATAGATCTGACATCATTATT AGAGAAACTGCAATTGTTGGGGTTATTGGAAGTGTTGGTCTAGGTTGGCAATTGCAAGAATCACTAAGTTCATTCGCATG GCAGGAAGTCACCATAGTTTTGATAGCTTATAGCTCCATCGCAATAGTTGGAGAATTAATAAATGGTAAAATCAAGAATA GTTTAACTTGA
Upstream 100 bases:
>100_bases TTATAAAATCTTTAATATTCCAAATTTTTTCTACCGCATAATAAGGTTTTTTCTAACAATAATTAGATCTATACACGAAG TGGTTTGGGGAATAATATTA
Downstream 100 bases:
>100_bases TTTGTAAGAATAATTTGTTAAATCAAGTAATTATTTTTTTTCGCTGATAGTGATTAGTTTACCAAAACAGCTTGTTGTAA TTGGAGATAGCTCAGTTTAT
Product: putative phosphonate ABC transporter
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MQIYGINFSIGIISICIPYIAVNSKVFAEQLETIDYKSFESINQINTPKFSSLITLIWNPIINTFKNFGLYRLECSIRST VILGLFGIGGIGTSIFLSFQTLNFKELWTYLWSLAILIILSGLIFKKIKFNTTNKILSIFFIAGFFITILFSFSYFLYFI FNNNFENFNSVSSLFKSSSDLGLFYFLKLILETIILSLLSTGIAISLPPLVIGIFNNNSSKIFIKIFAFLLRLIPTPVIL LTLLTFNNPSLSLAALTLGLHNAGITSKLLYTNLDSQDKRNYIAMKSLGISKKTSWLLGLFSQQAKSYLAYCAYRSDIII RETAIVGVIGSVGLGWQLQESLSSFAWQEVTIVLIAYSSIAIVGELINGKIKNSLT
Sequences:
>Translated_376_residues MQIYGINFSIGIISICIPYIAVNSKVFAEQLETIDYKSFESINQINTPKFSSLITLIWNPIINTFKNFGLYRLECSIRST VILGLFGIGGIGTSIFLSFQTLNFKELWTYLWSLAILIILSGLIFKKIKFNTTNKILSIFFIAGFFITILFSFSYFLYFI FNNNFENFNSVSSLFKSSSDLGLFYFLKLILETIILSLLSTGIAISLPPLVIGIFNNNSSKIFIKIFAFLLRLIPTPVIL LTLLTFNNPSLSLAALTLGLHNAGITSKLLYTNLDSQDKRNYIAMKSLGISKKTSWLLGLFSQQAKSYLAYCAYRSDIII RETAIVGVIGSVGLGWQLQESLSSFAWQEVTIVLIAYSSIAIVGELINGKIKNSLT >Mature_376_residues MQIYGINFSIGIISICIPYIAVNSKVFAEQLETIDYKSFESINQINTPKFSSLITLIWNPIINTFKNFGLYRLECSIRST VILGLFGIGGIGTSIFLSFQTLNFKELWTYLWSLAILIILSGLIFKKIKFNTTNKILSIFFIAGFFITILFSFSYFLYFI FNNNFENFNSVSSLFKSSSDLGLFYFLKLILETIILSLLSTGIAISLPPLVIGIFNNNSSKIFIKIFAFLLRLIPTPVIL LTLLTFNNPSLSLAALTLGLHNAGITSKLLYTNLDSQDKRNYIAMKSLGISKKTSWLLGLFSQQAKSYLAYCAYRSDIII RETAIVGVIGSVGLGWQLQESLSSFAWQEVTIVLIAYSSIAIVGELINGKIKNSLT
Specific function: Part of the ABC transporter complex phnCDE involved in phosphate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 42062; Mature: 42062
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIYGINFSIGIISICIPYIAVNSKVFAEQLETIDYKSFESINQINTPKFSSLITLIWNP CEEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH IINTFKNFGLYRLECSIRSTVILGLFGIGGIGTSIFLSFQTLNFKELWTYLWSLAILIIL HHHHHHHCCEEEEEECHHHHHHHHHHCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHH SGLIFKKIKFNTTNKILSIFFIAGFFITILFSFSYFLYFIFNNNFENFNSVSSLFKSSSD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCC LGLFYFLKLILETIILSLLSTGIAISLPPLVIGIFNNNSSKIFIKIFAFLLRLIPTPVIL CHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCEEHHHHHHHHHHHHCCHHHH LTLLTFNNPSLSLAALTLGLHNAGITSKLLYTNLDSQDKRNYIAMKSLGISKKTSWLLGL HHHHHCCCCCCCHHHHHHHHCCCCCCHHHHEECCCCCCCCCEEEEHHCCCCCHHHHHHHH FSQQAKSYLAYCAYRSDIIIRETAIVGVIGSVGLGWQLQESLSSFAWQEVTIVLIAYSSI HHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEHHHH AIVGELINGKIKNSLT HHHHHHHCCCHHCCCC >Mature Secondary Structure MQIYGINFSIGIISICIPYIAVNSKVFAEQLETIDYKSFESINQINTPKFSSLITLIWNP CEEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH IINTFKNFGLYRLECSIRSTVILGLFGIGGIGTSIFLSFQTLNFKELWTYLWSLAILIIL HHHHHHHCCEEEEEECHHHHHHHHHHCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHH SGLIFKKIKFNTTNKILSIFFIAGFFITILFSFSYFLYFIFNNNFENFNSVSSLFKSSSD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCC LGLFYFLKLILETIILSLLSTGIAISLPPLVIGIFNNNSSKIFIKIFAFLLRLIPTPVIL CHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCEEHHHHHHHHHHHHCCHHHH LTLLTFNNPSLSLAALTLGLHNAGITSKLLYTNLDSQDKRNYIAMKSLGISKKTSWLLGL HHHHHCCCCCCCHHHHHHHHCCCCCCHHHHEECCCCCCCCCEEEEHHCCCCCHHHHHHHH FSQQAKSYLAYCAYRSDIIIRETAIVGVIGSVGLGWQLQESLSSFAWQEVTIVLIAYSSI HHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEHHHH AIVGELINGKIKNSLT HHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA