Definition | Prochlorococcus marinus str. AS9601, complete genome. |
---|---|
Accession | NC_008816 |
Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is lgt [H]
Identifier: 123968053
GI number: 123968053
Start: 450066
End: 450959
Strand: Reverse
Name: lgt [H]
Synonym: A9601_05161
Alternate gene names: 123968053
Gene position: 450959-450066 (Counterclockwise)
Preceding gene: 123968054
Following gene: 123968052
Centisome position: 27.01
GC content: 30.31
Gene sequence:
>894_bases ATGCTCATACTTCAGGCTTTTATACAATCTCCAGGAGAAACTTTTTTAAATTTAGGATATATAACTATTAGATGGTACGG ACTTCTTATTTCGGTTTCAGTTTTAATAGGCCTATTTGTCTCTAAAAAACTTGCAAAGGCAAGAAATATTAACCCAGAGT ACATTAGTGAAATACTTCCATCATTAATAATCTCTTCAATAATTGGAGCTAGAGCTTATTACGTAATTTTTGAGTGGAGG CTATATAGCGGAGAGAACTTTTTTACTTCTTTTGAACTATTCAATAACATAATTCAAATACCCTCTTTTCTTGCAGTTTG GGAAGGAGGCATAGCAATCCATGGAGGTCTAATTGGAGGATTAATATCTATTATCTATTTCTGTAAGTCGAAAAAAATTA ATTTAAAAACTTTTATAGATATATTAATACCCTCGATTATTCTTGGACAATCAATAGGAAGGTGGGGAAATTTTTTCAAT AATGAAGCCTTTGGAGTGCCTACAAATTTGCCTTGGAAATTATTTATTCCTATCCAAAATAGGCCTTTAGAATTTATTAA TTATGAATTTTTTCATCCTACATTTCTCTATGAGTCATTGTGGAATCTTTTAATTTTCATCGTCCTTATTATTACCTTTA ATAAACAAAATAAAAAAGATTTTTTCAGGCCTGGCTTTATTAGCTGTCTTTATTTAATAAGTTATAGCTTTGGAAGATTC TGGATTGAAGGTTTAAGAACTGACCCACTATGCATTGGTGGACTTCCACCCTTCTGTGATGGCGGTATAAGAATGGCTCA ATTTATAAGTATTTTTCTATTTTCTTCTGGTTTAATTGGAATATTTTTTTTAAGATTGAGAACATATATTGGGAAAAATA GAAAGAATGGATAA
Upstream 100 bases:
>100_bases GCATTCTTCATTGGTGTAGGGTTAACACAAATACTTTTAGTATTAAAGAAAAAACAAGTAGAAAAAGTGCAAGCAGCAGA GGGTATCTAACTTTCTCTAA
Downstream 100 bases:
>100_bases CAAAATATCCTTTATTGGTGTTGGTCCAGGCGATCCAGAATTATTAACTTTAAAAGCATTAAAAAAGATAAAAATTGCAG ATGTCATTATTTGGACTGAT
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLILQAFIQSPGETFLNLGYITIRWYGLLISVSVLIGLFVSKKLAKARNINPEYISEILPSLIISSIIGARAYYVIFEWR LYSGENFFTSFELFNNIIQIPSFLAVWEGGIAIHGGLIGGLISIIYFCKSKKINLKTFIDILIPSIILGQSIGRWGNFFN NEAFGVPTNLPWKLFIPIQNRPLEFINYEFFHPTFLYESLWNLLIFIVLIITFNKQNKKDFFRPGFISCLYLISYSFGRF WIEGLRTDPLCIGGLPPFCDGGIRMAQFISIFLFSSGLIGIFFLRLRTYIGKNRKNG
Sequences:
>Translated_297_residues MLILQAFIQSPGETFLNLGYITIRWYGLLISVSVLIGLFVSKKLAKARNINPEYISEILPSLIISSIIGARAYYVIFEWR LYSGENFFTSFELFNNIIQIPSFLAVWEGGIAIHGGLIGGLISIIYFCKSKKINLKTFIDILIPSIILGQSIGRWGNFFN NEAFGVPTNLPWKLFIPIQNRPLEFINYEFFHPTFLYESLWNLLIFIVLIITFNKQNKKDFFRPGFISCLYLISYSFGRF WIEGLRTDPLCIGGLPPFCDGGIRMAQFISIFLFSSGLIGIFFLRLRTYIGKNRKNG >Mature_297_residues MLILQAFIQSPGETFLNLGYITIRWYGLLISVSVLIGLFVSKKLAKARNINPEYISEILPSLIISSIIGARAYYVIFEWR LYSGENFFTSFELFNNIIQIPSFLAVWEGGIAIHGGLIGGLISIIYFCKSKKINLKTFIDILIPSIILGQSIGRWGNFFN NEAFGVPTNLPWKLFIPIQNRPLEFINYEFFHPTFLYESLWNLLIFIVLIITFNKQNKKDFFRPGFISCLYLISYSFGRF WIEGLRTDPLCIGGLPPFCDGGIRMAQFISIFLFSSGLIGIFFLRLRTYIGKNRKNG
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=283, Percent_Identity=28.2685512367491, Blast_Score=75, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 34048; Mature: 34048
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILQAFIQSPGETFLNLGYITIRWYGLLISVSVLIGLFVSKKLAKARNINPEYISEILP CHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SLIISSIIGARAYYVIFEWRLYSGENFFTSFELFNNIIQIPSFLAVWEGGIAIHGGLIGG HHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH LISIIYFCKSKKINLKTFIDILIPSIILGQSIGRWGNFFNNEAFGVPTNLPWKLFIPIQN HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC RPLEFINYEFFHPTFLYESLWNLLIFIVLIITFNKQNKKDFFRPGFISCLYLISYSFGRF CCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH WIEGLRTDPLCIGGLPPFCDGGIRMAQFISIFLFSSGLIGIFFLRLRTYIGKNRKNG HHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLILQAFIQSPGETFLNLGYITIRWYGLLISVSVLIGLFVSKKLAKARNINPEYISEILP CHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SLIISSIIGARAYYVIFEWRLYSGENFFTSFELFNNIIQIPSFLAVWEGGIAIHGGLIGG HHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH LISIIYFCKSKKINLKTFIDILIPSIILGQSIGRWGNFFNNEAFGVPTNLPWKLFIPIQN HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC RPLEFINYEFFHPTFLYESLWNLLIFIVLIITFNKQNKKDFFRPGFISCLYLISYSFGRF CCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH WIEGLRTDPLCIGGLPPFCDGGIRMAQFISIFLFSSGLIGIFFLRLRTYIGKNRKNG HHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA