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The map label for this gene is recO [H]

Identifier: 123967986

GI number: 123967986

Start: 389480

End: 390265

Strand: Reverse

Name: recO [H]

Synonym: A9601_04491

Alternate gene names: 123967986

Gene position: 390265-389480 (Counterclockwise)

Preceding gene: 123967987

Following gene: 123967985

Centisome position: 23.37

GC content: 34.22

Gene sequence:

>786_bases
ATGTCTGGTTCTGGTGAGTGCAGACTAAAAGGTCTCTGTATTAAAGCTTCTCCATTAGGCGAGAATGATAGATTAATAAC
TATCCTTACCGATGAGCAAGGGATTGTTAGATTAGCGGTACCTGGTGCTAGGCGTCCTAAAAGTAGTCTTGCCGCAGCTA
CTCCTTTAACATATTTAAGTCTGCAAATTTTTGGGAAAAGAAATCTTAAATCTGTACGTCAAATTAAAATATTAAAAAGC
TATTCTGGCCTAGGTAAAAATATTGAATGTCTTGCAGCCGCGCAAGCAATAACTGAATTAACATTTTTATTAGTAGGTAA
TAATGACAAGCAACATGACTATTTATCTTGCGTTCTTGCACATCTTGATAGGATTTATTTATTTAAAGAGTCTCAAGAAG
AAGATATTAAAATGCTCTCAATGAGTCTTCAATCTTTAATCCATCTATTAGCCATCGGGGGTATTAATTTACCAATTCAT
CATTGTTGTAAAACTGGAGAACCTATTGTTCCACCTATAGGAAATTGGGAATGGAGTTGTTATTTTTTACCAAGTGAAGG
GTTTTCATCCATAGAAGATCCTCAAAGTAATCTAAAAATAAATGCATCTGAAGTTGCTCTATTACAGAGACTTCTTTTCC
CAGAATTACCAATAAAATCTAATGGAGAGTTGTTGGGTCCCAAAAAAGTCTGGCTTAAAATATTGTTCATTATTGAGACA
TGGATCTCTACTCAATTAGAGAAGGAGCTATCTTCACTAAAAATGTTGAGAGAAATATATAGTTAG

Upstream 100 bases:

>100_bases
AAAAAAACTGAAGCAAGTAATTGATTTGTTTGATATTGGAATTAATTGCGTGGGAACTTCCAATTTTTGTGAAATTTTTG
AAGAAGTTAACGTAATTTAA

Downstream 100 bases:

>100_bases
CATTTTCATGAAGCATTAAAAAATTTAAAAAATATGATCATGGCGCCTTTGCCTGTTAACTTAATAAATAGTTAATTCAA
TTAATTTGGTTCATATTGCC

Product: putative recombination protein O

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSGSGECRLKGLCIKASPLGENDRLITILTDEQGIVRLAVPGARRPKSSLAAATPLTYLSLQIFGKRNLKSVRQIKILKS
YSGLGKNIECLAAAQAITELTFLLVGNNDKQHDYLSCVLAHLDRIYLFKESQEEDIKMLSMSLQSLIHLLAIGGINLPIH
HCCKTGEPIVPPIGNWEWSCYFLPSEGFSSIEDPQSNLKINASEVALLQRLLFPELPIKSNGELLGPKKVWLKILFIIET
WISTQLEKELSSLKMLREIYS

Sequences:

>Translated_261_residues
MSGSGECRLKGLCIKASPLGENDRLITILTDEQGIVRLAVPGARRPKSSLAAATPLTYLSLQIFGKRNLKSVRQIKILKS
YSGLGKNIECLAAAQAITELTFLLVGNNDKQHDYLSCVLAHLDRIYLFKESQEEDIKMLSMSLQSLIHLLAIGGINLPIH
HCCKTGEPIVPPIGNWEWSCYFLPSEGFSSIEDPQSNLKINASEVALLQRLLFPELPIKSNGELLGPKKVWLKILFIIET
WISTQLEKELSSLKMLREIYS
>Mature_260_residues
SGSGECRLKGLCIKASPLGENDRLITILTDEQGIVRLAVPGARRPKSSLAAATPLTYLSLQIFGKRNLKSVRQIKILKSY
SGLGKNIECLAAAQAITELTFLLVGNNDKQHDYLSCVLAHLDRIYLFKESQEEDIKMLSMSLQSLIHLLAIGGINLPIHH
CCKTGEPIVPPIGNWEWSCYFLPSEGFSSIEDPQSNLKINASEVALLQRLLFPELPIKSNGELLGPKKVWLKILFIIETW
ISTQLEKELSSLKMLREIYS

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 29072; Mature: 28941

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSGECRLKGLCIKASPLGENDRLITILTDEQGIVRLAVPGARRPKSSLAAATPLTYLS
CCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHCCHHEEE
LQIFGKRNLKSVRQIKILKSYSGLGKNIECLAAAQAITELTFLLVGNNDKQHDYLSCVLA
EEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHH
HLDRIYLFKESQEEDIKMLSMSLQSLIHLLAIGGINLPIHHCCKTGEPIVPPIGNWEWSC
HHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEE
YFLPSEGFSSIEDPQSNLKINASEVALLQRLLFPELPIKSNGELLGPKKVWLKILFIIET
EEECCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHH
WISTQLEKELSSLKMLREIYS
HHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SGSGECRLKGLCIKASPLGENDRLITILTDEQGIVRLAVPGARRPKSSLAAATPLTYLS
CCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHCCHHEEE
LQIFGKRNLKSVRQIKILKSYSGLGKNIECLAAAQAITELTFLLVGNNDKQHDYLSCVLA
EEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHH
HLDRIYLFKESQEEDIKMLSMSLQSLIHLLAIGGINLPIHHCCKTGEPIVPPIGNWEWSC
HHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEE
YFLPSEGFSSIEDPQSNLKINASEVALLQRLLFPELPIKSNGELLGPKKVWLKILFIIET
EEECCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHH
WISTQLEKELSSLKMLREIYS
HHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA