Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
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Accession | NC_008786 |
Length | 5,566,749 |
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The map label for this gene is yceF [C]
Identifier: 121610205
GI number: 121610205
Start: 3641162
End: 3641761
Strand: Direct
Name: yceF [C]
Synonym: Veis_3264
Alternate gene names: 121610205
Gene position: 3641162-3641761 (Clockwise)
Preceding gene: 121610203
Following gene: 121610206
Centisome position: 65.41
GC content: 71.33
Gene sequence:
>600_bases ATGCATCGATCCCCTGCCTTGCAACGCCCTGTGGTTTTGGGCTCCACGTCGCGCTATCGGCGCGAGTTGCTCCAGCGCTT GAACCTGCGCTTTCAGGTCGCCGCCCCGGCGGTGGACGAGACCCCGCAGCCCGGCGAGGCCCCGCGCGCGCTGGCCCTGC GCCTGGCCCTGGCCAAGGCCCGCGCGGTCGCGCAGCAGCATCCCGAGGCGCTGGTGATCGGCGCCGATCAGGTCGCGGAC CTGGCCGGCGCTCCGCTGGGCAAGCCGGGCCAGCATCAACGCGCGGTGCAACAACTGCGCCAGATGCGCGGCCAGGCCGT GGCGTTTCAGACGGCGGTGGCCGTGGTGTGCGCGGCCACCGGTTTCGAGCAGTTGGACCTGGCCTGCGTGCAGGTGCAGT TTCGGGCGTTGTCCGACGCCGAGATCGAGCGCTACCTGCGCGCCGAGCAGCCCTACGATTGCGCCGGCAGTGCCAAGAGC GAGGGCCTGGGCATCGCGCTGCTCGACGCTATCCACAGCGATGACCCGACCGCGCTCATGGGCCTGCCGCTGATCCGCAC CTGCCGCATGTTGCGCGCCGCCGGGCTGACGTTGCCATGA
Upstream 100 bases:
>100_bases TGGCCCGAGAGCCGGCCTCCCGCCTGTGCGAAGGCTTTCACGTCCAAGCGCTGGGGGGAGAATTCCTTGGTCATGGCAGC CAGTGTAAGAGAATCGGCGC
Downstream 100 bases:
>100_bases GTGCGCCCGACACCTCCCCGGACGCAGGCCCGGGTCGCCTGTACCTGGTGCCCGCTCCGCTGGACTTTGGCTGCGACAGC CAGGTCCCGTTGCCGGACAT
Product: maf protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MHRSPALQRPVVLGSTSRYRRELLQRLNLRFQVAAPAVDETPQPGEAPRALALRLALAKARAVAQQHPEALVIGADQVAD LAGAPLGKPGQHQRAVQQLRQMRGQAVAFQTAVAVVCAATGFEQLDLACVQVQFRALSDAEIERYLRAEQPYDCAGSAKS EGLGIALLDAIHSDDPTALMGLPLIRTCRMLRAAGLTLP
Sequences:
>Translated_199_residues MHRSPALQRPVVLGSTSRYRRELLQRLNLRFQVAAPAVDETPQPGEAPRALALRLALAKARAVAQQHPEALVIGADQVAD LAGAPLGKPGQHQRAVQQLRQMRGQAVAFQTAVAVVCAATGFEQLDLACVQVQFRALSDAEIERYLRAEQPYDCAGSAKS EGLGIALLDAIHSDDPTALMGLPLIRTCRMLRAAGLTLP >Mature_199_residues MHRSPALQRPVVLGSTSRYRRELLQRLNLRFQVAAPAVDETPQPGEAPRALALRLALAKARAVAQQHPEALVIGADQVAD LAGAPLGKPGQHQRAVQQLRQMRGQAVAFQTAVAVVCAATGFEQLDLACVQVQFRALSDAEIERYLRAEQPYDCAGSAKS EGLGIALLDAIHSDDPTALMGLPLIRTCRMLRAAGLTLP
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=199, Percent_Identity=30.1507537688442, Blast_Score=78, Evalue=5e-15, Organism=Escherichia coli, GI87081830, Length=185, Percent_Identity=48.1081081081081, Blast_Score=177, Evalue=5e-46, Organism=Escherichia coli, GI1789646, Length=181, Percent_Identity=37.5690607734807, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21371; Mature: 21371
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRSPALQRPVVLGSTSRYRRELLQRLNLRFQVAAPAVDETPQPGEAPRALALRLALAKA CCCCCCCCCCEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH RAVAQQHPEALVIGADQVADLAGAPLGKPGQHQRAVQQLRQMRGQAVAFQTAVAVVCAAT HHHHHHCCCEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC GFEQLDLACVQVQFRALSDAEIERYLRAEQPYDCAGSAKSEGLGIALLDAIHSDDPTALM CHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHH GLPLIRTCRMLRAAGLTLP HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MHRSPALQRPVVLGSTSRYRRELLQRLNLRFQVAAPAVDETPQPGEAPRALALRLALAKA CCCCCCCCCCEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH RAVAQQHPEALVIGADQVADLAGAPLGKPGQHQRAVQQLRQMRGQAVAFQTAVAVVCAAT HHHHHHCCCEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC GFEQLDLACVQVQFRALSDAEIERYLRAEQPYDCAGSAKSEGLGIALLDAIHSDDPTALM CHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHH GLPLIRTCRMLRAAGLTLP HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA