Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
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Accession | NC_008786 |
Length | 5,566,749 |
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The map label for this gene is 121610153
Identifier: 121610153
GI number: 121610153
Start: 3585667
End: 3586350
Strand: Direct
Name: 121610153
Synonym: Veis_3212
Alternate gene names: NA
Gene position: 3585667-3586350 (Clockwise)
Preceding gene: 121610147
Following gene: 121610156
Centisome position: 64.41
GC content: 63.6
Gene sequence:
>684_bases ATGGATATGCGGCAATCGGACGCCGGCTCGGAGCACCACTACGATTCAATCATGCCAAGTTACAACGCTCCCCTTGAAAT CCATGTCCACGGACAGGTTCCGTTGCGTGCCGATGCGAGCTTCGAGCAGCTCCAGGAAGCACTCAAACCGCTGTGGAAGT ATGTCGGGGCCCGCTCGCTGACCGATGGCGCCTCCAGCGTCTACGAGGAAGAGCCGGGCATTCAGTTCGATGCGCAGGAG CATCTGCTGCAGATCTGCTGGACGGTGCACGGCGACGAGGATTTTCGCCAGTCGCTCGACGAGATGTGCATGAGCCTGAA CGAGCTGGCCGAGCAGGGCGCCGCGATCGAAGTCACGTTCTACGACGCCGGTTTCGATGAAGACGACGAGGAGGGGGAGT CCGAGGCCGATGCGCGCGACGAATTCATCTTGCTGTTCGTCGGCCCCACGCCGGCGGCCATCATGCAGGTGCAGCGCGAT CTGCTGGTGCAAGACGTGGTGGACATGATGGAGCGCCACTTCGACGGCGCCGAACTCGGCGGCGTGGTCGCCGAGATCGA CAAGCTGTTCAGCCAGCGTTTCGACGCGCTGGTGAACTCGCTGGAGATCGGCAAACCGCCCCGTGGCTCCGGCGGCTCCG GCAGCGGCCATGGCGGTGGCCGCCGTCCGCGCCATTTGCACTAG
Upstream 100 bases:
>100_bases GGCGATTGGCGCCGTGAGAAAATGGCGCTATGGTTGCGCTACCAAGCTGCGCCAGTCAAAAAGGTTCCCCCCATTTCCCC CAATACCAGCCACAAAGCCG
Downstream 100 bases:
>100_bases TGTCGCGTCACCGATCATCTGTCGGTCTGCGCTGGCCATCGAAGCGCATCGCGGCGTTGCATCGCTTGCCAATACGCTCG GTATTGGCTGCGCGATGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MDMRQSDAGSEHHYDSIMPSYNAPLEIHVHGQVPLRADASFEQLQEALKPLWKYVGARSLTDGASSVYEEEPGIQFDAQE HLLQICWTVHGDEDFRQSLDEMCMSLNELAEQGAAIEVTFYDAGFDEDDEEGESEADARDEFILLFVGPTPAAIMQVQRD LLVQDVVDMMERHFDGAELGGVVAEIDKLFSQRFDALVNSLEIGKPPRGSGGSGSGHGGGRRPRHLH
Sequences:
>Translated_227_residues MDMRQSDAGSEHHYDSIMPSYNAPLEIHVHGQVPLRADASFEQLQEALKPLWKYVGARSLTDGASSVYEEEPGIQFDAQE HLLQICWTVHGDEDFRQSLDEMCMSLNELAEQGAAIEVTFYDAGFDEDDEEGESEADARDEFILLFVGPTPAAIMQVQRD LLVQDVVDMMERHFDGAELGGVVAEIDKLFSQRFDALVNSLEIGKPPRGSGGSGSGHGGGRRPRHLH >Mature_227_residues MDMRQSDAGSEHHYDSIMPSYNAPLEIHVHGQVPLRADASFEQLQEALKPLWKYVGARSLTDGASSVYEEEPGIQFDAQE HLLQICWTVHGDEDFRQSLDEMCMSLNELAEQGAAIEVTFYDAGFDEDDEEGESEADARDEFILLFVGPTPAAIMQVQRD LLVQDVVDMMERHFDGAELGGVVAEIDKLFSQRFDALVNSLEIGKPPRGSGGSGSGHGGGRRPRHLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25131; Mature: 25131
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMRQSDAGSEHHYDSIMPSYNAPLEIHVHGQVPLRADASFEQLQEALKPLWKYVGARSL CCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC TDGASSVYEEEPGIQFDAQEHLLQICWTVHGDEDFRQSLDEMCMSLNELAEQGAAIEVTF CHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE YDAGFDEDDEEGESEADARDEFILLFVGPTPAAIMQVQRDLLVQDVVDMMERHFDGAELG EECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH GVVAEIDKLFSQRFDALVNSLEIGKPPRGSGGSGSGHGGGRRPRHLH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDMRQSDAGSEHHYDSIMPSYNAPLEIHVHGQVPLRADASFEQLQEALKPLWKYVGARSL CCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC TDGASSVYEEEPGIQFDAQEHLLQICWTVHGDEDFRQSLDEMCMSLNELAEQGAAIEVTF CHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE YDAGFDEDDEEGESEADARDEFILLFVGPTPAAIMQVQRDLLVQDVVDMMERHFDGAELG EECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH GVVAEIDKLFSQRFDALVNSLEIGKPPRGSGGSGSGHGGGRRPRHLH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA